Click here to switch to the map view.

The map label for this gene is yajC [H]

Identifier: 119897196

GI number: 119897196

Start: 969851

End: 970180

Strand: Reverse

Name: yajC [H]

Synonym: azo0905

Alternate gene names: 119897196

Gene position: 970180-969851 (Counterclockwise)

Preceding gene: 119897198

Following gene: 119897195

Centisome position: 22.17

GC content: 62.73

Gene sequence:

>330_bases
ATGGTGCTGATTTCCAACGCATACGCACAGGCCGCGGCCTCGCAGGACCCCACTGGCGGCCTCATGGGCATGCTGCCGCT
GATCCTGATGTTCGTGGTGCTCTACTTCCTGATGATCCGGCCGCAGATGAAGCGCGCGAAGGAACACAAGTCGATGGTGG
AAGCGCTCGCCAAAGGCGACGAAGTGGTCACCCAGGGCGGCATCGCCGGCCGTGTGGCCGAGATCGGCGAGAACTTCATC
CACCTCGAAGTCGCCGACAAGACCAACATCGTGGTCCAGAAGCAGGCCGTCGCTACCGTGCTGCCGAAGGGCACGCTGAA
GACCCTCTGA

Upstream 100 bases:

>100_bases
CCATCTTGCCCGCCGCCCCGCGGAGGCGGGACGGGGGCCGTCCCGGACCTGCAATGCGCTGCTGCTATAATCGCGGACCT
TTCGCAATCCCCCGGAGTAC

Downstream 100 bases:

>100_bases
GGATCGCCACCCGGAGCACGGCCATCCTGCAACCGCAGGGCCGCGCTCCGCGCCTCCTCCCGGCCGCGCCGCGGCCTCAC
CTCTCCGTCTCCCTCCGACG

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MVLISNAYAQAAASQDPTGGLMGMLPLILMFVVLYFLMIRPQMKRAKEHKSMVEALAKGDEVVTQGGIAGRVAEIGENFI
HLEVADKTNIVVQKQAVATVLPKGTLKTL

Sequences:

>Translated_109_residues
MVLISNAYAQAAASQDPTGGLMGMLPLILMFVVLYFLMIRPQMKRAKEHKSMVEALAKGDEVVTQGGIAGRVAEIGENFI
HLEVADKTNIVVQKQAVATVLPKGTLKTL
>Mature_109_residues
MVLISNAYAQAAASQDPTGGLMGMLPLILMFVVLYFLMIRPQMKRAKEHKSMVEALAKGDEVVTQGGIAGRVAEIGENFI
HLEVADKTNIVVQKQAVATVLPKGTLKTL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=109, Percent_Identity=43.1192660550459, Blast_Score=97, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11737; Mature: 11737

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLISNAYAQAAASQDPTGGLMGMLPLILMFVVLYFLMIRPQMKRAKEHKSMVEALAKGD
CEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
EVVTQGGIAGRVAEIGENFIHLEVADKTNIVVQKQAVATVLPKGTLKTL
HHHHCCCCHHHHHHHCCCEEEEEECCCCCEEEHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVLISNAYAQAAASQDPTGGLMGMLPLILMFVVLYFLMIRPQMKRAKEHKSMVEALAKGD
CEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
EVVTQGGIAGRVAEIGENFIHLEVADKTNIVVQKQAVATVLPKGTLKTL
HHHHCCCCHHHHHHHCCCEEEEEECCCCCEEEHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]