| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is mpl [H]
Identifier: 119897159
GI number: 119897159
Start: 929650
End: 930996
Strand: Direct
Name: mpl [H]
Synonym: azo0868
Alternate gene names: 119897159
Gene position: 929650-930996 (Clockwise)
Preceding gene: 119897149
Following gene: 119897163
Centisome position: 21.24
GC content: 68.52
Gene sequence:
>1347_bases ATGCACATCCACATTCTCGGTATCTGCGGCACCTTCATGGGCGGGGTGGCACTGCTCGCGCGCGCGGCCGGGCACACCGT TACCGGCTGCGACAGCAACGTCTATCCGCCGATGAGCACCCAGCTCGAGGAGCAGGGCATCGCGCTCAGCGAGGGCTACG ACCCCGCTCAGCTGGATCTTGCGCCCGACGTCTTCGTCATCGGCAACGCGATTTCCCGCGGCAATCCGCTGCTGGAGGCG ATTCTCGACCGCGGTCTGCCCTATGTCTCCGGTCCGCAATGGCTGGCCGAGCACGTGCTGGCGGGGCGCTGGGTGCTTGC CGTCGCGGGGACTCACGGCAAGACGACCACGACCTCGCTGCTGGCCTGGATGCTGGAGGACGCAGGCTTGTCGCCGGGCT TTCTGGTCGGCGGCGTGCCGAAGAACTTCGGGGTGTCGGCGCGCCTGACCGATTCGCCCTTCTTCGTCATCGAGGCCGAC GAGTACGACACCGCCTTCTGCGACAAGCGTTCGAAGTTCGTTCATTACCGGCCGCGCACCGCAATCCTCAATAACCTGGA GTTCGACCACGCCGACATCTTTGCCGATCTGGCCGCGATCGAAACGCAGTTTCATCACCTCGTCCGCACGCTGCCGCGGC AGGGGCGCATCGTCGCCAATGCGCGCGAGGATGCCCTGAAGCGGGTGCTGGCGCGCGGTTGCTGGTCCGAACTGGAATGG TTCAACGACGCGGCGCAGTGGTCGGCCGCCGCAGGTGCGCGCGATGCCGAGGCGGTGTTCCGGCTGGGGGATGAAGAGCT GGGGCGGGTGGAGATGCCGCTTGCCGGCAGCCACAACCGCGAGAATGCACTGGCGGCGATCGCGGCGGCGCGTCACGTGG GTGTGCCGCCGCAACAGGCGATCGCGAGCCTTGCCCGGTTCGAGGGCATCAAGCGGCGGCTGGAGCTGCGGGGTCGCGCG CGTGGGGTTGCGGTGTATGACGACTTCGCCCATCACCCCACCGCAATCGCGCTTACCGTTGAAGGCTTGCGTCGGCGCGA GCCGGAAGGCCGCATCCTGGCGGTGCTCGAGCCGCGCTCGAACACCATGAAGCTGGGTGTGATGAAGGCTCAGTTGCCCG GGAGTCTCGCGCAGGCGGACGCGGTGTTCTGCTACGCCGGCGGGTTGGGCTGGGATGCGGCCGCCGCGCTGGCGCCGCTG GGTGAGCGCGCGCAGGTGCATGAGGACCTCGGCGCGCTGGTGCAGGCGGTGGCCGCGACGGCGCGGCCGGGGGATCATGT GTTGGTCATGAGCAACGGCGGCTTCGGCGGCGTGCACCAGAAGCTGCTCGACGCGCTCGCCCGCTGA
Upstream 100 bases:
>100_bases GGTCGCGGCGGAGGCGGCGGCGCCATCGGTTAGAATGCCGGCCATTCTACACGGGCGGCCTCGCTCCACGAGCCGTCAGC GGCCGCCTCCCGGAGTTCCC
Downstream 100 bases:
>100_bases AAGGGGCGGGCGCGTCCCGCCTTAATTGCTGCGCCGGTTCTTGAAGTCGAGGCGGTCCGCCTCGGCCTGGTTGATGTATT CGAACACCCGCACGACACGC
Product: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
Products: NA
Alternate protein names: Murein peptide ligase [H]
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MHIHILGICGTFMGGVALLARAAGHTVTGCDSNVYPPMSTQLEEQGIALSEGYDPAQLDLAPDVFVIGNAISRGNPLLEA ILDRGLPYVSGPQWLAEHVLAGRWVLAVAGTHGKTTTTSLLAWMLEDAGLSPGFLVGGVPKNFGVSARLTDSPFFVIEAD EYDTAFCDKRSKFVHYRPRTAILNNLEFDHADIFADLAAIETQFHHLVRTLPRQGRIVANAREDALKRVLARGCWSELEW FNDAAQWSAAAGARDAEAVFRLGDEELGRVEMPLAGSHNRENALAAIAAARHVGVPPQQAIASLARFEGIKRRLELRGRA RGVAVYDDFAHHPTAIALTVEGLRRREPEGRILAVLEPRSNTMKLGVMKAQLPGSLAQADAVFCYAGGLGWDAAAALAPL GERAQVHEDLGALVQAVAATARPGDHVLVMSNGGFGGVHQKLLDALAR
Sequences:
>Translated_448_residues MHIHILGICGTFMGGVALLARAAGHTVTGCDSNVYPPMSTQLEEQGIALSEGYDPAQLDLAPDVFVIGNAISRGNPLLEA ILDRGLPYVSGPQWLAEHVLAGRWVLAVAGTHGKTTTTSLLAWMLEDAGLSPGFLVGGVPKNFGVSARLTDSPFFVIEAD EYDTAFCDKRSKFVHYRPRTAILNNLEFDHADIFADLAAIETQFHHLVRTLPRQGRIVANAREDALKRVLARGCWSELEW FNDAAQWSAAAGARDAEAVFRLGDEELGRVEMPLAGSHNRENALAAIAAARHVGVPPQQAIASLARFEGIKRRLELRGRA RGVAVYDDFAHHPTAIALTVEGLRRREPEGRILAVLEPRSNTMKLGVMKAQLPGSLAQADAVFCYAGGLGWDAAAALAPL GERAQVHEDLGALVQAVAATARPGDHVLVMSNGGFGGVHQKLLDALAR >Mature_448_residues MHIHILGICGTFMGGVALLARAAGHTVTGCDSNVYPPMSTQLEEQGIALSEGYDPAQLDLAPDVFVIGNAISRGNPLLEA ILDRGLPYVSGPQWLAEHVLAGRWVLAVAGTHGKTTTTSLLAWMLEDAGLSPGFLVGGVPKNFGVSARLTDSPFFVIEAD EYDTAFCDKRSKFVHYRPRTAILNNLEFDHADIFADLAAIETQFHHLVRTLPRQGRIVANAREDALKRVLARGCWSELEW FNDAAQWSAAAGARDAEAVFRLGDEELGRVEMPLAGSHNRENALAAIAAARHVGVPPQQAIASLARFEGIKRRLELRGRA RGVAVYDDFAHHPTAIALTVEGLRRREPEGRILAVLEPRSNTMKLGVMKAQLPGSLAQADAVFCYAGGLGWDAAAALAPL GERAQVHEDLGALVQAVAATARPGDHVLVMSNGGFGGVHQKLLDALAR
Specific function: Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N-acetylmuramic acid [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1790680, Length=451, Percent_Identity=59.2017738359202, Blast_Score=525, Evalue=1e-150, Organism=Escherichia coli, GI1786279, Length=394, Percent_Identity=27.4111675126904, Blast_Score=117, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005757 - InterPro: IPR016040 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: 6.3.2.- [C]
Molecular weight: Translated: 48036; Mature: 48036
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIHILGICGTFMGGVALLARAAGHTVTGCDSNVYPPMSTQLEEQGIALSEGYDPAQLDL CEEEEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHCCCEECCCCCCCEECC APDVFVIGNAISRGNPLLEAILDRGLPYVSGPQWLAEHVLAGRWVLAVAGTHGKTTTTSL CCCEEEECCHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHH LAWMLEDAGLSPGFLVGGVPKNFGVSARLTDSPFFVIEADEYDTAFCDKRSKFVHYRPRT HHHHHHHCCCCCCEEECCCCCCCCCEEEECCCCEEEEECCCCCCHHHCCCCCEEEECCHH AILNNLEFDHADIFADLAAIETQFHHLVRTLPRQGRIVANAREDALKRVLARGCWSELEW HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHH FNDAAQWSAAAGARDAEAVFRLGDEELGRVEMPLAGSHNRENALAAIAAARHVGVPPQQA HHHHHHHHHHCCCCHHHHHHHCCCHHCCEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHH IASLARFEGIKRRLELRGRARGVAVYDDFAHHPTAIALTVEGLRRREPEGRILAVLEPRS HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECHHHCCCCCCCEEEEECCCC NTMKLGVMKAQLPGSLAQADAVFCYAGGLGWDAAAALAPLGERAQVHEDLGALVQAVAAT CCEEEEEEEECCCCCHHHCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ARPGDHVLVMSNGGFGGVHQKLLDALAR CCCCCEEEEEECCCCCHHHHHHHHHHCC >Mature Secondary Structure MHIHILGICGTFMGGVALLARAAGHTVTGCDSNVYPPMSTQLEEQGIALSEGYDPAQLDL CEEEEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHCCCEECCCCCCCEECC APDVFVIGNAISRGNPLLEAILDRGLPYVSGPQWLAEHVLAGRWVLAVAGTHGKTTTTSL CCCEEEECCHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHH LAWMLEDAGLSPGFLVGGVPKNFGVSARLTDSPFFVIEADEYDTAFCDKRSKFVHYRPRT HHHHHHHCCCCCCEEECCCCCCCCCEEEECCCCEEEEECCCCCCHHHCCCCCEEEECCHH AILNNLEFDHADIFADLAAIETQFHHLVRTLPRQGRIVANAREDALKRVLARGCWSELEW HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHH FNDAAQWSAAAGARDAEAVFRLGDEELGRVEMPLAGSHNRENALAAIAAARHVGVPPQQA HHHHHHHHHHCCCCHHHHHHHCCCHHCCEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHH IASLARFEGIKRRLELRGRARGVAVYDDFAHHPTAIALTVEGLRRREPEGRILAVLEPRS HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECHHHCCCCCCCEEEEECCCC NTMKLGVMKAQLPGSLAQADAVFCYAGGLGWDAAAALAPLGERAQVHEDLGALVQAVAAT CCEEEEEEEECCCCCHHHCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ARPGDHVLVMSNGGFGGVHQKLLDALAR CCCCCEEEEEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 2843822; 7984428; 8808921 [H]