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The map label for this gene is slyB [H]

Identifier: 119897149

GI number: 119897149

Start: 922647

End: 923120

Strand: Direct

Name: slyB [H]

Synonym: azo0858

Alternate gene names: 119897149

Gene position: 922647-923120 (Clockwise)

Preceding gene: 119897148

Following gene: 119897159

Centisome position: 21.08

GC content: 71.94

Gene sequence:

>474_bases
ATGGTGAGTGTGAATCCGGTGGGGCGCCGGGCCCTGGCGCTGATCCTGGTCGCAAGTCTGGGCCTGGGCGGCTGCGCGGC
CGGCCTGGGCGGCGGCACCTACTCCCGCACCGAGGCACGACGCGCGATGGTGGTGCAGTTCGGCGTCATCGAATCGGTGC
GCGGCGTGCAGCTGGAGGGCACCAAGAGCCCGGTGGGAACCGTCTCGGGCGCTGCGGTCGGCGGCATCGCCGGCAGCTCC
GTGGGCGGCAACCGCGGTTCGGCAATCGGCGCGGTGCTGGGCGCCGTGGCGGGTGGCCTCGCCGGCTCCGCGATCGAAGA
AGGCGTGACCCGCAAGCCGGGTGTCGAGGTCACCGTGCAGCTGGAAAACGGTCAATACCTGGCGGTCGTCCAGCAGGACG
AAGGCGAGCAGTTCATGCCGGGCGAACGGGTCCGCATCCTGCGTGACGGCGGCACGACCCGCGTCACGCGCTGA

Upstream 100 bases:

>100_bases
TGATGGGCGCGATCAAGATCGCTCACCGCGGCGGGCAGAACCATGCGCCCACGCGGGCGGACATTGCGGCGCGCTATCTC
GCCGCTTTTGGAGAGGCACT

Downstream 100 bases:

>100_bases
GTCATCCGAACAGCACCAGACCCCACACCATCGCGAGATTGAGCAGCGCCACCAGCACGGCGGCGCTGCCGATGTCCTTT
GCGCGCTTGGCGAGCTGGTG

Product: putative outer membrane protein SlyB

Products: NA

Alternate protein names: 15 kDa lipoprotein; PAL cross-reacting lipoprotein [H]

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MVSVNPVGRRALALILVASLGLGGCAAGLGGGTYSRTEARRAMVVQFGVIESVRGVQLEGTKSPVGTVSGAAVGGIAGSS
VGGNRGSAIGAVLGAVAGGLAGSAIEEGVTRKPGVEVTVQLENGQYLAVVQQDEGEQFMPGERVRILRDGGTTRVTR

Sequences:

>Translated_157_residues
MVSVNPVGRRALALILVASLGLGGCAAGLGGGTYSRTEARRAMVVQFGVIESVRGVQLEGTKSPVGTVSGAAVGGIAGSS
VGGNRGSAIGAVLGAVAGGLAGSAIEEGVTRKPGVEVTVQLENGQYLAVVQQDEGEQFMPGERVRILRDGGTTRVTR
>Mature_157_residues
MVSVNPVGRRALALILVASLGLGGCAAGLGGGTYSRTEARRAMVVQFGVIESVRGVQLEGTKSPVGTVSGAAVGGIAGSS
VGGNRGSAIGAVLGAVAGGLAGSAIEEGVTRKPGVEVTVQLENGQYLAVVQQDEGEQFMPGERVRILRDGGTTRVTR

Specific function: Unknown

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pcp/slyB lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI48994887, Length=152, Percent_Identity=34.2105263157895, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 15646; Mature: 15646

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSVNPVGRRALALILVASLGLGGCAAGLGGGTYSRTEARRAMVVQFGVIESVRGVQLEG
CCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHEEEEEHHHHHCCCCEEEEC
TKSPVGTVSGAAVGGIAGSSVGGNRGSAIGAVLGAVAGGLAGSAIEEGVTRKPGVEVTVQ
CCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEE
LENGQYLAVVQQDEGEQFMPGERVRILRDGGTTRVTR
ECCCCEEEEEEECCCCCCCCCCEEEEEECCCCEECCC
>Mature Secondary Structure
MVSVNPVGRRALALILVASLGLGGCAAGLGGGTYSRTEARRAMVVQFGVIESVRGVQLEG
CCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHEEEEEHHHHHCCCCEEEEC
TKSPVGTVSGAAVGGIAGSSVGGNRGSAIGAVLGAVAGGLAGSAIEEGVTRKPGVEVTVQ
CCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEE
LENGQYLAVVQQDEGEQFMPGERVRILRDGGTTRVTR
ECCCCEEEEEEECCCCCCCCCCEEEEEECCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2828309; 7542800 [H]