| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yccU [H]
Identifier: 119897035
GI number: 119897035
Start: 794846
End: 795355
Strand: Reverse
Name: yccU [H]
Synonym: azo0744
Alternate gene names: 119897035
Gene position: 795355-794846 (Counterclockwise)
Preceding gene: 119897036
Following gene: 119897030
Centisome position: 18.18
GC content: 67.25
Gene sequence:
>510_bases ATGCCAGCCACCCCGCAAGGACAGTTCATCGACGACATCGCCGGCCTGCGCCGCGTGCTGCAGCAGACCCGCAGCATCGC CGTGGTGGGCCTGTCGGCCAACTGGAACCGGCCGAGCTACTTTGCCGCCAAGTACATGCAGACCCGCGGCTACCGCATCA TTCCGGTCAATCCCGCCTATGAGGAAGTGCTGGGCGAGAAGTGCTATCCCAGCCTGCGCGCGATTCCGGAGCCAGTCGAC ATGGTCGATGTGTTTCGCCGCCCCGAGGAAGTGCCGGCGATCGTCGATGACGCGATCGCGATCGGCGCCCGCACGCTCTG GCTGCAGCTGGGTGTCATCCACCCCGAGGCCGCGGCGAAGGCGCAGGCGGGCGGGCTGGATGTGGTGATGGACCGCTGCG TGAAGATCGAATTCGCCCGCCTCTTTGGCGGGCTCAACTGGGTGGGCGTCAATACCGGCGTAATTTCGGCCAAGCGCGCC GGACGCAGCCTGCCGCGACCGGGCGCCTGA
Upstream 100 bases:
>100_bases GCCACGCCGGCGGAGGTATGGGCATGGGCGCGCATGCACTGGCACCTTGCCGGCGTGCCCCGCCAGCGCCACGCGCCGGC TCCAGCCTGAGGACCCACAC
Downstream 100 bases:
>100_bases TCCCGCTCAGTGCCGCCCGCCGTAGCCCGCGATGCCGATCGCGAGGCGTACGGCCTGGTAGGCCAGCCAGCTCGCAACCC GCCGCAAGGTCCGCTGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MPATPQGQFIDDIAGLRRVLQQTRSIAVVGLSANWNRPSYFAAKYMQTRGYRIIPVNPAYEEVLGEKCYPSLRAIPEPVD MVDVFRRPEEVPAIVDDAIAIGARTLWLQLGVIHPEAAAKAQAGGLDVVMDRCVKIEFARLFGGLNWVGVNTGVISAKRA GRSLPRPGA
Sequences:
>Translated_169_residues MPATPQGQFIDDIAGLRRVLQQTRSIAVVGLSANWNRPSYFAAKYMQTRGYRIIPVNPAYEEVLGEKCYPSLRAIPEPVD MVDVFRRPEEVPAIVDDAIAIGARTLWLQLGVIHPEAAAKAQAGGLDVVMDRCVKIEFARLFGGLNWVGVNTGVISAKRA GRSLPRPGA >Mature_168_residues PATPQGQFIDDIAGLRRVLQQTRSIAVVGLSANWNRPSYFAAKYMQTRGYRIIPVNPAYEEVLGEKCYPSLRAIPEPVDM VDVFRRPEEVPAIVDDAIAIGARTLWLQLGVIHPEAAAKAQAGGLDVVMDRCVKIEFARLFGGLNWVGVNTGVISAKRAG RSLPRPGA
Specific function: Unknown
COG id: COG1832
COG function: function code R; Predicted CoA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081810, Length=132, Percent_Identity=52.2727272727273, Blast_Score=127, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003781 - InterPro: IPR016040 [H]
Pfam domain/function: PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 18442; Mature: 18310
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATPQGQFIDDIAGLRRVLQQTRSIAVVGLSANWNRPSYFAAKYMQTRGYRIIPVNPAY CCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCHH EEVLGEKCYPSLRAIPEPVDMVDVFRRPEEVPAIVDDAIAIGARTLWLQLGVIHPEAAAK HHHHHHHCCCHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH AQAGGLDVVMDRCVKIEFARLFGGLNWVGVNTGVISAKRAGRSLPRPGA HCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEHHHCCCCCCCCCC >Mature Secondary Structure PATPQGQFIDDIAGLRRVLQQTRSIAVVGLSANWNRPSYFAAKYMQTRGYRIIPVNPAY CCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCHH EEVLGEKCYPSLRAIPEPVDMVDVFRRPEEVPAIVDDAIAIGARTLWLQLGVIHPEAAAK HHHHHHHCCCHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH AQAGGLDVVMDRCVKIEFARLFGGLNWVGVNTGVISAKRAGRSLPRPGA HCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 9868784 [H]