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The map label for this gene is fdxD [H]

Identifier: 119896819

GI number: 119896819

Start: 563265

End: 563615

Strand: Direct

Name: fdxD [H]

Synonym: azo0528

Alternate gene names: 119896819

Gene position: 563265-563615 (Clockwise)

Preceding gene: 119896818

Following gene: 119896820

Centisome position: 12.87

GC content: 62.11

Gene sequence:

>351_bases
ATGCCTAACATCACTTTCTCCAGCCCGATCCACAAGGACAAGACCGTCTACGCGGTCACGGGCTCGCACACCAACACCAT
CCTGAAGGTGGCCAAGGAGAACCACATCCCGATCGACTTCTCGTGTGAAGACGGCGAATGCGCCACCTGCCTGGTCAAGG
TCACCTCGCTGACCCGCAAGGGCAAGATGGCGGGCCCGCTGACCGACAAGGAAGTCGCGGTGCTGAAGGAGCACAAGAAG
ATCACCGCCGAAGAGATCGAGCGGATGCGCGTCGAGGACGTGCCGACCACCCCGTGGCGTCTCGCCTGCCAGCTCGTGCT
GCGCGACGAAGACCTGCTCGTCGAGTACTGA

Upstream 100 bases:

>100_bases
CTGTCAGGCCCAGGTGCTGGGCGGGCATGTGGTGGTGCGACCCGGCTGACAAGCGACAACCCCGGCAGAGAGGCCATCCA
ACCACGTTCGGAGCATCACC

Downstream 100 bases:

>100_bases
TCGCGACGCCGGCCGGCCTGCGGGCCGGCCGTTTCCTTCGCGTGCTTCCATGAGGAATGCCGAGATGCTTGCTCCGCTCA
ATCACCGTCCGACTCCGGCA

Product: ferredoxin V

Products: NA

Alternate protein names: Ferredoxin V; FdV; Ferredoxin, plant-type [H]

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MPNITFSSPIHKDKTVYAVTGSHTNTILKVAKENHIPIDFSCEDGECATCLVKVTSLTRKGKMAGPLTDKEVAVLKEHKK
ITAEEIERMRVEDVPTTPWRLACQLVLRDEDLLVEY

Sequences:

>Translated_116_residues
MPNITFSSPIHKDKTVYAVTGSHTNTILKVAKENHIPIDFSCEDGECATCLVKVTSLTRKGKMAGPLTDKEVAVLKEHKK
ITAEEIERMRVEDVPTTPWRLACQLVLRDEDLLVEY
>Mature_115_residues
PNITFSSPIHKDKTVYAVTGSHTNTILKVAKENHIPIDFSCEDGECATCLVKVTSLTRKGKMAGPLTDKEVAVLKEHKKI
TAEEIERMRVEDVPTTPWRLACQLVLRDEDLLVEY

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin probably participates in nitrogen fixation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 13038; Mature: 12907

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNITFSSPIHKDKTVYAVTGSHTNTILKVAKENHIPIDFSCEDGECATCLVKVTSLTRK
CCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHCC
GKMAGPLTDKEVAVLKEHKKITAEEIERMRVEDVPTTPWRLACQLVLRDEDLLVEY
CCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHEEEEEECCCEEEEEC
>Mature Secondary Structure 
PNITFSSPIHKDKTVYAVTGSHTNTILKVAKENHIPIDFSCEDGECATCLVKVTSLTRK
CCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHCC
GKMAGPLTDKEVAVLKEHKKITAEEIERMRVEDVPTTPWRLACQLVLRDEDLLVEY
CCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7693551 [H]