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The map label for this gene is fdxC [H]

Identifier: 119896818

GI number: 119896818

Start: 562926

End: 563213

Strand: Direct

Name: fdxC [H]

Synonym: azo0527

Alternate gene names: 119896818

Gene position: 562926-563213 (Clockwise)

Preceding gene: 119896817

Following gene: 119896819

Centisome position: 12.86

GC content: 64.93

Gene sequence:

>288_bases
ATGCCCAAGGCCCAGGTCACGTTCGAGGATATCGAAGTCACCGTCACCGTCCCCGCCGGAACCCGGCTCATCGAAGTGTC
CGAGAAGATCGGCGCCGGCATCACCTACGGCTGCCGCGAGGGCGAATGCGGCACCTGCATGATGAAGATCGTGTCGGGCA
GCGAACACCTCGCCAACCCCTCGGTGCTGGAAGACAAGGTGCTCAAGGACAACTTTGCCGGCGTCGCCAACCGACTCGCC
TGTCAGGCCCAGGTGCTGGGCGGGCATGTGGTGGTGCGACCCGGCTGA

Upstream 100 bases:

>100_bases
CACCCTCGGCCGCGAACTCGCCGAGCAGCTCACCGGCAAGGCCGGCCCCCGCCACATCGATTTTTCCGCGCTGCACGCGC
GTTCTGCATAGGAGCACGTC

Downstream 100 bases:

>100_bases
CAAGCGACAACCCCGGCAGAGAGGCCATCCAACCACGTTCGGAGCATCACCATGCCTAACATCACTTTCTCCAGCCCGAT
CCACAAGGACAAGACCGTCT

Product: ferredoxin IV

Products: NA

Alternate protein names: Ferredoxin IV; FdIV; Ferredoxin, plant-type [H]

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MPKAQVTFEDIEVTVTVPAGTRLIEVSEKIGAGITYGCREGECGTCMMKIVSGSEHLANPSVLEDKVLKDNFAGVANRLA
CQAQVLGGHVVVRPG

Sequences:

>Translated_95_residues
MPKAQVTFEDIEVTVTVPAGTRLIEVSEKIGAGITYGCREGECGTCMMKIVSGSEHLANPSVLEDKVLKDNFAGVANRLA
CQAQVLGGHVVVRPG
>Mature_94_residues
PKAQVTFEDIEVTVTVPAGTRLIEVSEKIGAGITYGCREGECGTCMMKIVSGSEHLANPSVLEDKVLKDNFAGVANRLAC
QAQVLGGHVVVRPG

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin is required for nitrogen fixation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 10000; Mature: 9868

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKAQVTFEDIEVTVTVPAGTRLIEVSEKIGAGITYGCREGECGTCMMKIVSGSEHLANP
CCCCEEEEEEEEEEEECCCCCEEEEECHHHCCCEEECCCCCCCCCEEEEEECCCCCCCCC
SVLEDKVLKDNFAGVANRLACQAQVLGGHVVVRPG
CCHHHHHHHCCHHHHHHHHHHEEEECCCEEEEECC
>Mature Secondary Structure 
PKAQVTFEDIEVTVTVPAGTRLIEVSEKIGAGITYGCREGECGTCMMKIVSGSEHLANP
CCCEEEEEEEEEEEECCCCCEEEEECHHHCCCEEECCCCCCCCCEEEEEECCCCCCCCC
SVLEDKVLKDNFAGVANRLACQAQVLGGHVVVRPG
CCHHHHHHHCCHHHHHHHHHHEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2315024; 1847145; 8264535; 2071578 [H]