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The map label for this gene is rnfH [H]

Identifier: 119896802

GI number: 119896802

Start: 547249

End: 547530

Strand: Reverse

Name: rnfH [H]

Synonym: azo0511

Alternate gene names: 119896802

Gene position: 547530-547249 (Counterclockwise)

Preceding gene: 119896803

Following gene: 119896801

Centisome position: 12.51

GC content: 64.18

Gene sequence:

>282_bases
ATGCGCATCGGAGTTGCCTACGCCGACGTCGCCCAGCCGGTCTGGCTGAAGATCGACGTTCCCGACACCGCCACCGTGCA
GGAGGCGATCGAGATCTCGGGCATCCTGAAGGCCTTTCCGCAGATCGACCTGGGCACCCAGAAGGTCGGCATCTTCGGCA
AGCTCGCCAAGCTCGATGCACCGCTGAAGCCGGGCGATCGGGTCGAGATATACCGCCCGATCATCTGCGACCCGAGCCAG
GTGCCGCGCAAGAACGGTTCGGACGACGACGAGGACGAATGA

Upstream 100 bases:

>100_bases
TCGCCGCCCACCGGGTGCTGTCGCAGCGGGCCGAACGCCGCGCGGCGGCGGCCCCCGGCGCCGACACCGCCCCCGCCTGA
TCCGCCACGAGGACCCCATC

Downstream 100 bases:

>100_bases
GCGCGGGGCGCGGCGCCGGCTGAGTCCTCCGTCTCGCGCCGCGCTTCGTCCTGCGGACGGCGCCGCGGCACTGCGGTAAG
CTCGCGGCTTTCCAGCCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MRIGVAYADVAQPVWLKIDVPDTATVQEAIEISGILKAFPQIDLGTQKVGIFGKLAKLDAPLKPGDRVEIYRPIICDPSQ
VPRKNGSDDDEDE

Sequences:

>Translated_93_residues
MRIGVAYADVAQPVWLKIDVPDTATVQEAIEISGILKAFPQIDLGTQKVGIFGKLAKLDAPLKPGDRVEIYRPIICDPSQ
VPRKNGSDDDEDE
>Mature_93_residues
MRIGVAYADVAQPVWLKIDVPDTATVQEAIEISGILKAFPQIDLGTQKVGIFGKLAKLDAPLKPGDRVEIYRPIICDPSQ
VPRKNGSDDDEDE

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family [H]

Homologues:

Organism=Escherichia coli, GI87082139, Length=84, Percent_Identity=42.8571428571429, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005346 [H]

Pfam domain/function: PF03658 UPF0125 [H]

EC number: NA

Molecular weight: Translated: 10161; Mature: 10161

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGVAYADVAQPVWLKIDVPDTATVQEAIEISGILKAFPQIDLGTQKVGIFGKLAKLDA
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHCCC
PLKPGDRVEIYRPIICDPSQVPRKNGSDDDEDE
CCCCCCCEEEEECEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIGVAYADVAQPVWLKIDVPDTATVQEAIEISGILKAFPQIDLGTQKVGIFGKLAKLDA
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHCCC
PLKPGDRVEIYRPIICDPSQVPRKNGSDDDEDE
CCCCCCCEEEEECEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA