| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is sltY [H]
Identifier: 119896787
GI number: 119896787
Start: 531552
End: 533480
Strand: Reverse
Name: sltY [H]
Synonym: azo0496
Alternate gene names: 119896787
Gene position: 533480-531552 (Counterclockwise)
Preceding gene: 119896789
Following gene: 119896786
Centisome position: 12.19
GC content: 71.33
Gene sequence:
>1929_bases ATGAAGCAGTTTCTTTGGGGCGCGCTGGCCGCAGCGCTGATGTGGTTTTCCGGGGCAGCGGGCGCCCAGACGGCCAAGAG CGGCGATGAGCGCATCCTGGCCGCGCGCGATGCAATCCGCAACGGCGACCGGGCCGCGCTGGAATGGCTCGCGGCCAGCA CCGAGAACCATGTGCTCAACCCCTACGTGCGCTACTGGCTGCTGTTCAACAAGCTGGCGCGCCCGGAGCCGCCGCCGGCG GCCGAGCTGTCCGACTTCCTGCTGCGCGAGGCCGGCAGCATGCTGGCCGACCGCCTGCGCGGCGACTGGCTGCGGCGCAT GGCCAAGGACGGCGACTGGGCGGGCTTCGTTGCGCTCTACCCCGACCTGGTGGCACCCGACGCCGAACTGCGCTGCCTCG GCTGGACGGCCCGGCTGATGACCGGCGACCGCGCGGTGCTGGACGAAGTTGCGCGCCAGTGGATGGACCTTGTCGACAGC CACGCGGCATGCGAAACCAGCCTGCGCGCCACACTCAGCGCCGGCCTGGTGGGCGAGGACGAGGTCTGGTGGCGGATCCG CCGCCAGGTGGAAGGCAAGAACCCGGCGCAGGCGCGCACCACGCTGACCTGGCTGCCGGCCACCAGCGCGCCTCTGCCGG GCGCGCTCGAGCAGGCGCTCAACGCGCCCGCGCCCTACCTCGACCGCCTGCCGCCCAACTTCGCCATCACCCGCGCCGGG CGCGAACTCGCGCTCGCGGCGCTGGTACGGCTGGCACGCGACGACCTCTCGGGCGCGTACAGCCGGCTGATCCGCCTGCA GGACCGGCTGGAAACCGGCGAGCGCGCGTACGCCTACGCGGCGCTCGCGCTGCGCGCCGCGTTTGCCCAGCAGCCCGATG CAGTGGCGTGGTTCCAGGCCGCCGGCAATGTGCTGCTGACTGCGGAACAACGCGCGTGGCGCGTGCGCGTCGCCCTGCGC GCCAGCGACTGGAGCGCGGTGCGGCACGCGATCGCCGCGCTGCCACCCGCCGAGCAGAACGAACCGGAATGGATCTACTG GCTGGGCCGCGCCCACGCCGCCGCCGGCCAGCGCGCCGAAGCCGAGGCGCTCTACGCGCGCATTGCCGACCAGAGCGGCT TCTACGGCCTGCTCGCGGCCGAGGAACTCGGGCGCCCGTTTGCGCCCCCCTTGAAGGGCGGCGCGATCACCGCGGCCGAC CTGCGCCAGGCCGAGAGCGACCTCGGCCTGCAGCGCGCGCTGGCGCTGTTCCGCCTCGACATGCGCACCGAAGGCGTCCG CGAATGGAACTGGTCGCTGCGCAACCAGACCGAAGCCTTCACGCTCGCGGCCGCGCGCATCGCGCTCGACGCCGGCATCT ACGACCGCGCGATCAACACCGCGGAACGGGGCAACCCCAACGGCAACTTCGAGATGCGCTTCCTGACCCCCTACCGCCAG CTGATCGAGCCCCAGGTGCGCGGCCAGGGACTGGACCTGTCGTGGGTCTATGGGCTGATGCGGCAGGAGAGCCGCTTCGT GGTGCCGGCGCGCTCCAGTTCCGGCGCGCAGGGGCTGATGCAGGTGATGCCGGCCACGGGCAAATGGGTGGCGGCCAAGA TCGGCATGCGCGGCTACCACCCCGGCCTGCTCTCCGATCCCGACACCAACGTGCAGCTGGGCACCAGCTACATGCGCATG ATCCTGGAAGACCTGGACAACCACCCGGTGCTCGCCAGCGCCGGCTACAACGCCGGCCCCAGCCGGGCCAAGCGCTGGCG CGACGCAAAACCGCTCGAAGGCGCGATCTATGCTGAAACCATCCCGTTCGACGAGACGCGGGATTACGTCAAGAAGGTGA TGACCAACACCGTGATCTACGCGGCGATGCTCGAAGGCCGGCCGCAGTCGCTGAAGACCCGGCTGGGCACCATCGCCGCA CGCAACTGA
Upstream 100 bases:
>100_bases ACGGGCCGCGCGGCGCAGGGCTGCAACCGCGTCGGGCTGGGGGGAATCGGAGCCGGTCACTGTGATAAGGTTCTGCGGAT AGATGCAGGGATGTTAAGGG
Downstream 100 bases:
>100_bases GGAGAGGAAACCGCGATGAAATCGACCCGCGTCGTCCTGATCGGCGGCTCCGGCTTTGTCGGCAGCGTGATCGCCAACCG CCTGAGCGCCGCCGCCATCG
Product: putative soulbe lytic murein transglycosylase
Products: 1,6-Anhydrobond [C]
Alternate protein names: Exomuramidase; Peptidoglycan lytic exotransglycosylase; Slt70 [H]
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MKQFLWGALAAALMWFSGAAGAQTAKSGDERILAARDAIRNGDRAALEWLAASTENHVLNPYVRYWLLFNKLARPEPPPA AELSDFLLREAGSMLADRLRGDWLRRMAKDGDWAGFVALYPDLVAPDAELRCLGWTARLMTGDRAVLDEVARQWMDLVDS HAACETSLRATLSAGLVGEDEVWWRIRRQVEGKNPAQARTTLTWLPATSAPLPGALEQALNAPAPYLDRLPPNFAITRAG RELALAALVRLARDDLSGAYSRLIRLQDRLETGERAYAYAALALRAAFAQQPDAVAWFQAAGNVLLTAEQRAWRVRVALR ASDWSAVRHAIAALPPAEQNEPEWIYWLGRAHAAAGQRAEAEALYARIADQSGFYGLLAAEELGRPFAPPLKGGAITAAD LRQAESDLGLQRALALFRLDMRTEGVREWNWSLRNQTEAFTLAAARIALDAGIYDRAINTAERGNPNGNFEMRFLTPYRQ LIEPQVRGQGLDLSWVYGLMRQESRFVVPARSSSGAQGLMQVMPATGKWVAAKIGMRGYHPGLLSDPDTNVQLGTSYMRM ILEDLDNHPVLASAGYNAGPSRAKRWRDAKPLEGAIYAETIPFDETRDYVKKVMTNTVIYAAMLEGRPQSLKTRLGTIAA RN
Sequences:
>Translated_642_residues MKQFLWGALAAALMWFSGAAGAQTAKSGDERILAARDAIRNGDRAALEWLAASTENHVLNPYVRYWLLFNKLARPEPPPA AELSDFLLREAGSMLADRLRGDWLRRMAKDGDWAGFVALYPDLVAPDAELRCLGWTARLMTGDRAVLDEVARQWMDLVDS HAACETSLRATLSAGLVGEDEVWWRIRRQVEGKNPAQARTTLTWLPATSAPLPGALEQALNAPAPYLDRLPPNFAITRAG RELALAALVRLARDDLSGAYSRLIRLQDRLETGERAYAYAALALRAAFAQQPDAVAWFQAAGNVLLTAEQRAWRVRVALR ASDWSAVRHAIAALPPAEQNEPEWIYWLGRAHAAAGQRAEAEALYARIADQSGFYGLLAAEELGRPFAPPLKGGAITAAD LRQAESDLGLQRALALFRLDMRTEGVREWNWSLRNQTEAFTLAAARIALDAGIYDRAINTAERGNPNGNFEMRFLTPYRQ LIEPQVRGQGLDLSWVYGLMRQESRFVVPARSSSGAQGLMQVMPATGKWVAAKIGMRGYHPGLLSDPDTNVQLGTSYMRM ILEDLDNHPVLASAGYNAGPSRAKRWRDAKPLEGAIYAETIPFDETRDYVKKVMTNTVIYAAMLEGRPQSLKTRLGTIAA RN >Mature_642_residues MKQFLWGALAAALMWFSGAAGAQTAKSGDERILAARDAIRNGDRAALEWLAASTENHVLNPYVRYWLLFNKLARPEPPPA AELSDFLLREAGSMLADRLRGDWLRRMAKDGDWAGFVALYPDLVAPDAELRCLGWTARLMTGDRAVLDEVARQWMDLVDS HAACETSLRATLSAGLVGEDEVWWRIRRQVEGKNPAQARTTLTWLPATSAPLPGALEQALNAPAPYLDRLPPNFAITRAG RELALAALVRLARDDLSGAYSRLIRLQDRLETGERAYAYAALALRAAFAQQPDAVAWFQAAGNVLLTAEQRAWRVRVALR ASDWSAVRHAIAALPPAEQNEPEWIYWLGRAHAAAGQRAEAEALYARIADQSGFYGLLAAEELGRPFAPPLKGGAITAAD LRQAESDLGLQRALALFRLDMRTEGVREWNWSLRNQTEAFTLAAARIALDAGIYDRAINTAERGNPNGNFEMRFLTPYRQ LIEPQVRGQGLDLSWVYGLMRQESRFVVPARSSSGAQGLMQVMPATGKWVAAKIGMRGYHPGLLSDPDTNVQLGTSYMRM ILEDLDNHPVLASAGYNAGPSRAKRWRDAKPLEGAIYAETIPFDETRDYVKKVMTNTVIYAAMLEGRPQSLKTRLGTIAA RN
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Periplasm. Note=Tightly associated with the murein sacculus (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transglycosylase slt family [H]
Homologues:
Organism=Escherichia coli, GI87082441, Length=649, Percent_Identity=24.9614791987673, Blast_Score=175, Evalue=6e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016026 - InterPro: IPR008258 - InterPro: IPR012289 - InterPro: IPR008939 - InterPro: IPR000189 [H]
Pfam domain/function: PF01464 SLT [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 70901; Mature: 70901
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFLWGALAAALMWFSGAAGAQTAKSGDERILAARDAIRNGDRAALEWLAASTENHVLN CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC PYVRYWLLFNKLARPEPPPAAELSDFLLREAGSMLADRLRGDWLRRMAKDGDWAGFVALY HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHC PDLVAPDAELRCLGWTARLMTGDRAVLDEVARQWMDLVDSHAACETSLRATLSAGLVGED HHHCCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH EVWWRIRRQVEGKNPAQARTTLTWLPATSAPLPGALEQALNAPAPYLDRLPPNFAITRAG HHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCHHHCCCCCCEEECCC RELALAALVRLARDDLSGAYSRLIRLQDRLETGERAYAYAALALRAAFAQQPDAVAWFQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH AGNVLLTAEQRAWRVRVALRASDWSAVRHAIAALPPAEQNEPEWIYWLGRAHAAAGQRAE CCCEEEEECCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCCHH AEALYARIADQSGFYGLLAAEELGRPFAPPLKGGAITAADLRQAESDLGLQRALALFRLD HHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH MRTEGVREWNWSLRNQTEAFTLAAARIALDAGIYDRAINTAERGNPNGNFEMRFLTPYRQ HHHCCHHHHCCHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECHHHH LIEPQVRGQGLDLSWVYGLMRQESRFVVPARSSSGAQGLMQVMPATGKWVAAKIGMRGYH HCCHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCCC PGLLSDPDTNVQLGTSYMRMILEDLDNHPVLASAGYNAGPSRAKRWRDAKPLEGAIYAET CCCCCCCCCCEEECHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCEEEEC IPFDETRDYVKKVMTNTVIYAAMLEGRPQSLKTRLGTIAARN CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKQFLWGALAAALMWFSGAAGAQTAKSGDERILAARDAIRNGDRAALEWLAASTENHVLN CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC PYVRYWLLFNKLARPEPPPAAELSDFLLREAGSMLADRLRGDWLRRMAKDGDWAGFVALY HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHC PDLVAPDAELRCLGWTARLMTGDRAVLDEVARQWMDLVDSHAACETSLRATLSAGLVGED HHHCCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH EVWWRIRRQVEGKNPAQARTTLTWLPATSAPLPGALEQALNAPAPYLDRLPPNFAITRAG HHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCHHHCCCCCCEEECCC RELALAALVRLARDDLSGAYSRLIRLQDRLETGERAYAYAALALRAAFAQQPDAVAWFQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH AGNVLLTAEQRAWRVRVALRASDWSAVRHAIAALPPAEQNEPEWIYWLGRAHAAAGQRAE CCCEEEEECCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCCHH AEALYARIADQSGFYGLLAAEELGRPFAPPLKGGAITAADLRQAESDLGLQRALALFRLD HHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH MRTEGVREWNWSLRNQTEAFTLAAARIALDAGIYDRAINTAERGNPNGNFEMRFLTPYRQ HHHCCHHHHCCHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECHHHH LIEPQVRGQGLDLSWVYGLMRQESRFVVPARSSSGAQGLMQVMPATGKWVAAKIGMRGYH HCCHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCCC PGLLSDPDTNVQLGTSYMRMILEDLDNHPVLASAGYNAGPSRAKRWRDAKPLEGAIYAET CCCCCCCCCCEEECHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCEEEEC IPFDETRDYVKKVMTNTVIYAAMLEGRPQSLKTRLGTIAARN CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]