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The map label for this gene is yhbU [H]

Identifier: 119896665

GI number: 119896665

Start: 396857

End: 397870

Strand: Reverse

Name: yhbU [H]

Synonym: azo0374

Alternate gene names: 119896665

Gene position: 397870-396857 (Counterclockwise)

Preceding gene: 119896666

Following gene: 119896664

Centisome position: 9.09

GC content: 68.54

Gene sequence:

>1014_bases
ATGACCTCCTCCCAGCGCATCGAACTCGTCTGCCCCGCCGGCTCGCTGCCGGCGCTCAAGACGGCCATCGACCACGGCGC
CGACTGCGTCTATCTCGGCTTCAAGGACGCCACCAACGCACGCAACTTCACCGGGCTCAACTTCGATCCGGCGCAGATGC
GCGAAGGCATCGCCTACGCTCATGCGCGCCGGCGCAAGGTGCTGCTGGCGCTCAACACCTACCCCCAGACCGCCAACTGG
GCGGGCTGGACCGCCGCGGTGGACCGCGCCGCCGAATTCGGTATCGACGCGGTGATCCTCGCCGACCCCGGCCTGATGGC
CTACGCGGCCAAGACCCATCCGCAACTGCGGCTGCACCTCTCGGTACAGGGTTCGGCCACCAGCTACGAGGCGATCAACT
TCTATCACGAGCGCTTCGGCATCCAGCGCGCGGTGCTGCCGCGGGTGCTGTCGATGGCGCAGGTCGAGCAGGTGGTCGGC
CGCACGCCGGTGGAAATCGAGGTGTTCGGCTTCGGCGGCCTGTGCGTGATGGTGGAAGGCCGCTGCGCGCTCTCCGCCTA
TGCCACCGGCGAATCGCCCAACTGCAACGGCGCCTGCTCGCCGGGCAAGCACGTGCGCTGGGAACAGACGCCGCAGGGCA
TGGAGACGCGGCTCAACGGCATCCTGATCGACCGCTTCGGCGAACACGAGCGCGCCGGCTACCCGACGCTGTGCAAGGGC
CGCTTCGAGGTGAACGACGAGACCTACTACGCAATCGAGGAGCCGACCAGCCTCAACACCCTGGAGATGCTGCCGGAACT
CGCCCGCGTCGGCGTCGCCGCGATCAAGATCGAGGGCCGCCAACGCAGCCCGGCCTACGTCGCCCAGGTCACCAAGGTGT
GGCGCGCCGCGCTCGACCGCGTCGTCGCCGACCCCGCCGGCTTCCATGCGCTGCCCGCGTGGATGGCCGAACTCAACAAG
GTTTCCGAAGGCCAGAGCCACACCCTCGGCGCCTACTACCGCCCCTGGAAATGA

Upstream 100 bases:

>100_bases
CGCCGGCGCCGCCAACCCACCTTTGACCCGTGTCAAAGCACGGCGCGCGCCCGCGCACTAAGGTGGCGCCGCTCCGCCCC
CGGGCCTTCGCGACGACCCC

Downstream 100 bases:

>100_bases
GGATGCAGACCGCCATGAAGCTGTCCCTCGGCCCCCTGCTCTACTACTGGCCGCGCCAGAGCGTGCTCGACTTCTACGCG
GAGATCGCTGACAGCCCGGT

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MTSSQRIELVCPAGSLPALKTAIDHGADCVYLGFKDATNARNFTGLNFDPAQMREGIAYAHARRRKVLLALNTYPQTANW
AGWTAAVDRAAEFGIDAVILADPGLMAYAAKTHPQLRLHLSVQGSATSYEAINFYHERFGIQRAVLPRVLSMAQVEQVVG
RTPVEIEVFGFGGLCVMVEGRCALSAYATGESPNCNGACSPGKHVRWEQTPQGMETRLNGILIDRFGEHERAGYPTLCKG
RFEVNDETYYAIEEPTSLNTLEMLPELARVGVAAIKIEGRQRSPAYVAQVTKVWRAALDRVVADPAGFHALPAWMAELNK
VSEGQSHTLGAYYRPWK

Sequences:

>Translated_337_residues
MTSSQRIELVCPAGSLPALKTAIDHGADCVYLGFKDATNARNFTGLNFDPAQMREGIAYAHARRRKVLLALNTYPQTANW
AGWTAAVDRAAEFGIDAVILADPGLMAYAAKTHPQLRLHLSVQGSATSYEAINFYHERFGIQRAVLPRVLSMAQVEQVVG
RTPVEIEVFGFGGLCVMVEGRCALSAYATGESPNCNGACSPGKHVRWEQTPQGMETRLNGILIDRFGEHERAGYPTLCKG
RFEVNDETYYAIEEPTSLNTLEMLPELARVGVAAIKIEGRQRSPAYVAQVTKVWRAALDRVVADPAGFHALPAWMAELNK
VSEGQSHTLGAYYRPWK
>Mature_336_residues
TSSQRIELVCPAGSLPALKTAIDHGADCVYLGFKDATNARNFTGLNFDPAQMREGIAYAHARRRKVLLALNTYPQTANWA
GWTAAVDRAAEFGIDAVILADPGLMAYAAKTHPQLRLHLSVQGSATSYEAINFYHERFGIQRAVLPRVLSMAQVEQVVGR
TPVEIEVFGFGGLCVMVEGRCALSAYATGESPNCNGACSPGKHVRWEQTPQGMETRLNGILIDRFGEHERAGYPTLCKGR
FEVNDETYYAIEEPTSLNTLEMLPELARVGVAAIKIEGRQRSPAYVAQVTKVWRAALDRVVADPAGFHALPAWMAELNKV
SEGQSHTLGAYYRPWK

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1789548, Length=331, Percent_Identity=59.214501510574, Blast_Score=423, Evalue=1e-120,
Organism=Escherichia coli, GI1788397, Length=322, Percent_Identity=31.3664596273292, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI87081910, Length=309, Percent_Identity=27.5080906148867, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 36985; Mature: 36853

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSQRIELVCPAGSLPALKTAIDHGADCVYLGFKDATNARNFTGLNFDPAQMREGIAYA
CCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
HARRRKVLLALNTYPQTANWAGWTAAVDRAAEFGIDAVILADPGLMAYAAKTHPQLRLHL
HHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCEEEEEE
SVQGSATSYEAINFYHERFGIQRAVLPRVLSMAQVEQVVGRTPVEIEVFGFGGLCVMVEG
EECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEC
RCALSAYATGESPNCNGACSPGKHVRWEQTPQGMETRLNGILIDRFGEHERAGYPTLCKG
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCEEEEECCCCCCCCCCCCEECC
RFEVNDETYYAIEEPTSLNTLEMLPELARVGVAAIKIEGRQRSPAYVAQVTKVWRAALDR
EEEECCCEEEEEECCCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
VVADPAGFHALPAWMAELNKVSEGQSHTLGAYYRPWK
HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSSQRIELVCPAGSLPALKTAIDHGADCVYLGFKDATNARNFTGLNFDPAQMREGIAYA
CCCCEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
HARRRKVLLALNTYPQTANWAGWTAAVDRAAEFGIDAVILADPGLMAYAAKTHPQLRLHL
HHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCEEEEEE
SVQGSATSYEAINFYHERFGIQRAVLPRVLSMAQVEQVVGRTPVEIEVFGFGGLCVMVEG
EECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEC
RCALSAYATGESPNCNGACSPGKHVRWEQTPQGMETRLNGILIDRFGEHERAGYPTLCKG
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCEEEEECCCCCCCCCCCCEECC
RFEVNDETYYAIEEPTSLNTLEMLPELARVGVAAIKIEGRQRSPAYVAQVTKVWRAALDR
EEEECCCEEEEEECCCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
VVADPAGFHALPAWMAELNKVSEGQSHTLGAYYRPWK
HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]