| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is paaK [H]
Identifier: 119896594
GI number: 119896594
Start: 327612
End: 328934
Strand: Direct
Name: paaK [H]
Synonym: azo0303
Alternate gene names: 119896594
Gene position: 327612-328934 (Clockwise)
Preceding gene: 119896593
Following gene: 119896595
Centisome position: 7.49
GC content: 65.91
Gene sequence:
>1323_bases ATGCCCATCAACAGCTATGCACCCCCGCAGCTCGAACCGATCGAGACCGCGAGCATCGACGAGCTGCGCGCGCTGCAGCT CGAGCGCCTGAAGTGGAGCGTGCGCCACGCCTACGAGAACGTGCCGCACTACCGCAAGAAGTTCGACGAGAAGGGCGTCC ATCCGGACGACCTCAAGTCCCTCGCCGACCTCGCCAAGTTCCCCTTCACCAGCAAGTATGACCTGCGCGACAACTACCCC TTCGGCATGTTCGCGGTGCCGATGGACAGGATCGCCCGCGTCCACGCCTCGTCCGGCACCACCGGCAAGCCGACCGTGGT GGGCTACACGCTGAAGGACATCGACACCTGGGCCACCGTGGTGGCGCGCTCGATCCGCGCCGCGGGCGGACGCCCCGGTG ACATGGTGCACGTGTCCTACGGCTACGGCCTCTTCACCGGCGGCCTGGGGGCGCACTACGGCGCCGAGAAGCTGGGCTGC ACCGTGGTGCCGATGTCCGGCGGCCAGACCGAGAAGCAGATCCAGATCATCCAGGACTTCAAGCCCAAGATCATCATGGT GACGCCCTCCTACATGCTGACCATCCTCGACGAGATGGAACGCATGGGCATCGACCCGAAATCCACCTCGCTGCGCATCG GCATCTTCGGCGCCGAGCCGTGGACGCCGGCGATGCGCGTCGCGATGGAGCAGCGCGCCGGCATCGACGCGGTGGACATC TACGGCCTGTCCGAAGTGATGGGGCCGGGCGTGGCCAATGAATGCGTCGAGACAAAGGACGGCCCGACCATCTGGGAAGA CCACTTCTACCCCGAGATCATCGACCCCAATACCGGCGAGGTGCTGCCGGACGGTTCCGAAGGCGAGCTGGTGTTCACCT CGCTCTCCAAGGAAGCGATGCCGGTGATCCGCTACCGCACCCGCGACCTCACCCGGCTGCTGCCGCCCAGCGCGCGCAGC ATGCGGCGCATGGCCAAGATCACCGGCCGTTCGGACGACATGCTGATCATCCGCGGTGTGAACGTGTTCCCGACCCAGAT CGAGGAACTGATCTGCAAGATCCCCAAGCTCGCGCCGCACTACCTGCTGGAGGTCGACAAGCAGGGCCACATGGACACGC TGACGGTGAAGGTGGAGATCAATGCCGAGGCCGAGGTGGGCCGTCACCCCGAGCACAAGGAAGCGCTGGCGCGCGAGCTG ACGCACTCGATCAAGAGCCTGATCGGGGTGTCCGCAAAGGTGCTGGTCGGCGAGCCGTTCTCGATCGAGCGGGTCACGGT GGGCAAGGCCAAGCGCGTCATCGACCGCCGGCCCAAGGACTGA
Upstream 100 bases:
>100_bases GCCGGTCGTAGAAATACAGGCCTGAACGGCCGCCGCCCGGACAACAAAAAACAGCCTGCCGGGCGGCTCCAGAACCAGCA GAGGGACAGAGGAGACAACC
Downstream 100 bases:
>100_bases ATTTCCGACGGCGGCCCGTGTAGCCGCCGCGTTTGACACCACAAGGAGGAGCGCAGCATGTACACCCAAGCGCTGGACAT ACCCCAGGCCGACGCCGCGC
Product: phenylacetate--CoA ligase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MPINSYAPPQLEPIETASIDELRALQLERLKWSVRHAYENVPHYRKKFDEKGVHPDDLKSLADLAKFPFTSKYDLRDNYP FGMFAVPMDRIARVHASSGTTGKPTVVGYTLKDIDTWATVVARSIRAAGGRPGDMVHVSYGYGLFTGGLGAHYGAEKLGC TVVPMSGGQTEKQIQIIQDFKPKIIMVTPSYMLTILDEMERMGIDPKSTSLRIGIFGAEPWTPAMRVAMEQRAGIDAVDI YGLSEVMGPGVANECVETKDGPTIWEDHFYPEIIDPNTGEVLPDGSEGELVFTSLSKEAMPVIRYRTRDLTRLLPPSARS MRRMAKITGRSDDMLIIRGVNVFPTQIEELICKIPKLAPHYLLEVDKQGHMDTLTVKVEINAEAEVGRHPEHKEALAREL THSIKSLIGVSAKVLVGEPFSIERVTVGKAKRVIDRRPKD
Sequences:
>Translated_440_residues MPINSYAPPQLEPIETASIDELRALQLERLKWSVRHAYENVPHYRKKFDEKGVHPDDLKSLADLAKFPFTSKYDLRDNYP FGMFAVPMDRIARVHASSGTTGKPTVVGYTLKDIDTWATVVARSIRAAGGRPGDMVHVSYGYGLFTGGLGAHYGAEKLGC TVVPMSGGQTEKQIQIIQDFKPKIIMVTPSYMLTILDEMERMGIDPKSTSLRIGIFGAEPWTPAMRVAMEQRAGIDAVDI YGLSEVMGPGVANECVETKDGPTIWEDHFYPEIIDPNTGEVLPDGSEGELVFTSLSKEAMPVIRYRTRDLTRLLPPSARS MRRMAKITGRSDDMLIIRGVNVFPTQIEELICKIPKLAPHYLLEVDKQGHMDTLTVKVEINAEAEVGRHPEHKEALAREL THSIKSLIGVSAKVLVGEPFSIERVTVGKAKRVIDRRPKD >Mature_439_residues PINSYAPPQLEPIETASIDELRALQLERLKWSVRHAYENVPHYRKKFDEKGVHPDDLKSLADLAKFPFTSKYDLRDNYPF GMFAVPMDRIARVHASSGTTGKPTVVGYTLKDIDTWATVVARSIRAAGGRPGDMVHVSYGYGLFTGGLGAHYGAEKLGCT VVPMSGGQTEKQIQIIQDFKPKIIMVTPSYMLTILDEMERMGIDPKSTSLRIGIFGAEPWTPAMRVAMEQRAGIDAVDIY GLSEVMGPGVANECVETKDGPTIWEDHFYPEIIDPNTGEVLPDGSEGELVFTSLSKEAMPVIRYRTRDLTRLLPPSARSM RRMAKITGRSDDMLIIRGVNVFPTQIEELICKIPKLAPHYLLEVDKQGHMDTLTVKVEINAEAEVGRHPEHKEALARELT HSIKSLIGVSAKVLVGEPFSIERVTVGKAKRVIDRRPKD
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=429, Percent_Identity=65.967365967366, Blast_Score=602, Evalue=1e-173,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 48937; Mature: 48806
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPINSYAPPQLEPIETASIDELRALQLERLKWSVRHAYENVPHYRKKFDEKGVHPDDLKS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHH LADLAKFPFTSKYDLRDNYPFGMFAVPMDRIARVHASSGTTGKPTVVGYTLKDIDTWATV HHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHH VARSIRAAGGRPGDMVHVSYGYGLFTGGLGAHYGAEKLGCTVVPMSGGQTEKQIQIIQDF HHHHHHHCCCCCCCEEEEEECCEEEECCCCCCCCHHHHCEEEEECCCCCCHHHHHHHHCC KPKIIMVTPSYMLTILDEMERMGIDPKSTSLRIGIFGAEPWTPAMRVAMEQRAGIDAVDI CCCEEEECHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEC YGLSEVMGPGVANECVETKDGPTIWEDHFYPEIIDPNTGEVLPDGSEGELVFTSLSKEAM CCHHHHHCCCHHHHHHCCCCCCCEECCCCCCCEECCCCCCCCCCCCCCCEEEEECCCHHH PVIRYRTRDLTRLLPPSARSMRRMAKITGRSDDMLIIRGVNVFPTQIEELICKIPKLAPH HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCH YLLEVDKQGHMDTLTVKVEINAEAEVGRHPEHKEALARELTHSIKSLIGVSAKVLVGEPF HHEEECCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCC SIERVTVGKAKRVIDRRPKD CEEEEEHHHHHHHHHCCCCC >Mature Secondary Structure PINSYAPPQLEPIETASIDELRALQLERLKWSVRHAYENVPHYRKKFDEKGVHPDDLKS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHH LADLAKFPFTSKYDLRDNYPFGMFAVPMDRIARVHASSGTTGKPTVVGYTLKDIDTWATV HHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHH VARSIRAAGGRPGDMVHVSYGYGLFTGGLGAHYGAEKLGCTVVPMSGGQTEKQIQIIQDF HHHHHHHCCCCCCCEEEEEECCEEEECCCCCCCCHHHHCEEEEECCCCCCHHHHHHHHCC KPKIIMVTPSYMLTILDEMERMGIDPKSTSLRIGIFGAEPWTPAMRVAMEQRAGIDAVDI CCCEEEECHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEC YGLSEVMGPGVANECVETKDGPTIWEDHFYPEIIDPNTGEVLPDGSEGELVFTSLSKEAM CCHHHHHCCCHHHHHHCCCCCCCEECCCCCCCEECCCCCCCCCCCCCCCEEEEECCCHHH PVIRYRTRDLTRLLPPSARSMRRMAKITGRSDDMLIIRGVNVFPTQIEELICKIPKLAPH HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCH YLLEVDKQGHMDTLTVKVEINAEAEVGRHPEHKEALARELTHSIKSLIGVSAKVLVGEPF HHEEECCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCC SIERVTVGKAKRVIDRRPKD CEEEEEHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]