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The map label for this gene is uidR [H]

Identifier: 119896534

GI number: 119896534

Start: 269367

End: 270011

Strand: Reverse

Name: uidR [H]

Synonym: azo0243

Alternate gene names: 119896534

Gene position: 270011-269367 (Counterclockwise)

Preceding gene: 119896541

Following gene: 119896530

Centisome position: 6.17

GC content: 68.37

Gene sequence:

>645_bases
ATGACCGCCGACCGCAGCCCTGTTGACGCACCGCGCGCCGAGGCGCGCCGCGCCCAGATCCTGGACGCCGCCGTGGCCTG
TTTCCGCGCCCATGGCTTTCACGGCGCCAGCATCGCGCAGATTTCCAAGGCGGCCGGCATGAGCGCCGGGCACATTTATC
ACTACTTTGATAACAAGGAAGCGATCATCGCGGCGATCGTTGAGCAGGATCTCGAACGTCTGCTGACCCTGACCGCCGAA
ATGCGTTCCGCGCGCGACGTGCTGGAAGCGATGATCGAGCGCGCGGCCGAAGGCGTGCGCGACAACCTCGACCCCGCCAG
CGTGGGCCTGAAGCTGGAAATCGTGGCCGAAGCCTCGCGCAACCCGCGCGTGGCCGAGATCGTGCGTCAGGCCGACGCGA
CGTGCCGCGACAGCCTGGCCGAAACCCTGCGTGCGATGCGCGCCAACTGCGGCCACCGCGACGACGAGGCGGCCATCGCC
GGGCTCACCGAAGTCCTCGCCGCGATGTTCGGCGGGCTGATGATCCGCAGCGTGCGCAACCCCGACCTCGAGCAGGACAC
GGTGATCCGCATGTTCCAGCGCGTGATCCGCTTCATCATCACCGACGCGCTGGCTGCACCTGCACCGGGCGAGGCGCCGC
ACTGA

Upstream 100 bases:

>100_bases
TACTTTTGAAATAGAACGTTCGTTCTAGATTGAACGCTCATTCTATGTTAGGCTCTATTGCAGTGCAAGATCGTCATCGC
ACCGCATTACGGAGACCCTC

Downstream 100 bases:

>100_bases
GCGCCCCGTCCGCGTCGATCCGCCGCGCCTACACGTAGCCCAGCCGGCGCGGCAACCACAGCGCCAGTTCCGGAAACACC
ACCATCGCCGCCAGCCCGGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Uid operon repressor [H]

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTADRSPVDAPRAEARRAQILDAAVACFRAHGFHGASIAQISKAAGMSAGHIYHYFDNKEAIIAAIVEQDLERLLTLTAE
MRSARDVLEAMIERAAEGVRDNLDPASVGLKLEIVAEASRNPRVAEIVRQADATCRDSLAETLRAMRANCGHRDDEAAIA
GLTEVLAAMFGGLMIRSVRNPDLEQDTVIRMFQRVIRFIITDALAAPAPGEAPH

Sequences:

>Translated_214_residues
MTADRSPVDAPRAEARRAQILDAAVACFRAHGFHGASIAQISKAAGMSAGHIYHYFDNKEAIIAAIVEQDLERLLTLTAE
MRSARDVLEAMIERAAEGVRDNLDPASVGLKLEIVAEASRNPRVAEIVRQADATCRDSLAETLRAMRANCGHRDDEAAIA
GLTEVLAAMFGGLMIRSVRNPDLEQDTVIRMFQRVIRFIITDALAAPAPGEAPH
>Mature_213_residues
TADRSPVDAPRAEARRAQILDAAVACFRAHGFHGASIAQISKAAGMSAGHIYHYFDNKEAIIAAIVEQDLERLLTLTAEM
RSARDVLEAMIERAAEGVRDNLDPASVGLKLEIVAEASRNPRVAEIVRQADATCRDSLAETLRAMRANCGHRDDEAAIAG
LTEVLAAMFGGLMIRSVRNPDLEQDTVIRMFQRVIRFIITDALAAPAPGEAPH

Specific function: Repressor for the uidRABC (gusRABC) operon [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787904, Length=132, Percent_Identity=34.8484848484849, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23183; Mature: 23052

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADRSPVDAPRAEARRAQILDAAVACFRAHGFHGASIAQISKAAGMSAGHIYHYFDNKE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCH
AIIAAIVEQDLERLLTLTAEMRSARDVLEAMIERAAEGVRDNLDPASVGLKLEIVAEASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEEEEECCCC
NPRVAEIVRQADATCRDSLAETLRAMRANCGHRDDEAAIAGLTEVLAAMFGGLMIRSVRN
CCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDLEQDTVIRMFQRVIRFIITDALAAPAPGEAPH
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TADRSPVDAPRAEARRAQILDAAVACFRAHGFHGASIAQISKAAGMSAGHIYHYFDNKE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCH
AIIAAIVEQDLERLLTLTAEMRSARDVLEAMIERAAEGVRDNLDPASVGLKLEIVAEASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEEEEECCCC
NPRVAEIVRQADATCRDSLAETLRAMRANCGHRDDEAAIAGLTEVLAAMFGGLMIRSVRN
CCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDLEQDTVIRMFQRVIRFIITDALAAPAPGEAPH
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]