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The map label for this gene is dctQ1 [C]

Identifier: 119896532

GI number: 119896532

Start: 267570

End: 268058

Strand: Direct

Name: dctQ1 [C]

Synonym: azo0241

Alternate gene names: 119896532

Gene position: 267570-268058 (Clockwise)

Preceding gene: 119896531

Following gene: 119896533

Centisome position: 6.11

GC content: 67.48

Gene sequence:

>489_bases
ATGAATCCCGATCCTTCCGCCGACACGGCCGCCGAGGCACCCGCGCCGCTGTCGCCCGAACAAATCCTGTGCGGCATCGC
GATGGCGCTGATCGTGCTGATTTCGCTCGGCAACGTCGTCGCGCGCTATCTCACCTCGCAGTCCTTCGCGGCGACGGAGG
AATTCTCGATCGCGCTGCTGCTGATCCTGTCCTTCCTCGGCTCCTCCACCGCGTTCGCGTTCGACCGCCATATCCGCGTG
ACCTTCTTCATCGAACGCCTGCCGTCGCGCTGGCGCCAGGGCGCGGAATGGCTCAGCTTCGTCGTCACCGCGGCGCTGTT
CGGCTTCATCGCCTTCTACGCCGGGCGGCTGACCTGGGACCAGTACCGCTTCGAGGAGACCTCGCCGGCGCTCGGGCTGC
CGCAGTGGTGGTACACCGTGTGGATGCCGGCGCTGGCGGTGGTGATCGTGCTGCGCCTCGTGGTCACCCGGCTGGGAGCG
CGCTCATGA

Upstream 100 bases:

>100_bases
CTGAGCGGTTTCGGGCCGGCCTCCGCGCCGGCGCCGCCGTCCCCATGCCGGGCAGTGCCGTGAACGGTCTGCCCGGCTTC
GTTTTGGAACACCCCTGACC

Downstream 100 bases:

>100_bases
CCGGCGTCGTACTGATCGGCCTGTTCCTGCTTGCGCTGGTGGCCGGGCTGCCGCTCGCCGTGGGCCTCGGGGTCGCCAGC
ATCGCGGTGCTCGCGCTGGC

Product: DctQ1 protein

Products: NA

Alternate protein names: TRAP Transporter Subunit DctQ; TRAP Transporter Small Transmembrane Protein; Integral Membrane Protein; Tripartite ATP-Independent Periplasmic; DctQ1 Protein; TRAP Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MNPDPSADTAAEAPAPLSPEQILCGIAMALIVLISLGNVVARYLTSQSFAATEEFSIALLLILSFLGSSTAFAFDRHIRV
TFFIERLPSRWRQGAEWLSFVVTAALFGFIAFYAGRLTWDQYRFEETSPALGLPQWWYTVWMPALAVVIVLRLVVTRLGA
RS

Sequences:

>Translated_162_residues
MNPDPSADTAAEAPAPLSPEQILCGIAMALIVLISLGNVVARYLTSQSFAATEEFSIALLLILSFLGSSTAFAFDRHIRV
TFFIERLPSRWRQGAEWLSFVVTAALFGFIAFYAGRLTWDQYRFEETSPALGLPQWWYTVWMPALAVVIVLRLVVTRLGA
RS
>Mature_162_residues
MNPDPSADTAAEAPAPLSPEQILCGIAMALIVLISLGNVVARYLTSQSFAATEEFSIALLLILSFLGSSTAFAFDRHIRV
TFFIERLPSRWRQGAEWLSFVVTAALFGFIAFYAGRLTWDQYRFEETSPALGLPQWWYTVWMPALAVVIVLRLVVTRLGA
RS

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18003; Mature: 18003

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPDPSADTAAEAPAPLSPEQILCGIAMALIVLISLGNVVARYLTSQSFAATEEFSIALL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILSFLGSSTAFAFDRHIRVTFFIERLPSRWRQGAEWLSFVVTAALFGFIAFYAGRLTWD
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QYRFEETSPALGLPQWWYTVWMPALAVVIVLRLVVTRLGARS
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNPDPSADTAAEAPAPLSPEQILCGIAMALIVLISLGNVVARYLTSQSFAATEEFSIALL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILSFLGSSTAFAFDRHIRVTFFIERLPSRWRQGAEWLSFVVTAALFGFIAFYAGRLTWD
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QYRFEETSPALGLPQWWYTVWMPALAVVIVLRLVVTRLGARS
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA