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The map label for this gene is hvrA1 [H]

Identifier: 119896485

GI number: 119896485

Start: 213935

End: 214333

Strand: Direct

Name: hvrA1 [H]

Synonym: azo0194

Alternate gene names: 119896485

Gene position: 213935-214333 (Clockwise)

Preceding gene: 119896483

Following gene: 119896486

Centisome position: 4.89

GC content: 70.93

Gene sequence:

>399_bases
ATGGAAATCGATCTCAAAAGCTACACCCTGCCGCAGCTTCGTGCCCTGCGGGAACAGACCGCGCGGGCGATCGACCGCCT
TCAGCGCAGCCAGCGCGAAACCCTGCTGCGGCGGCTGTCCGCCCTTGCTCGGGCCGAAGGGCTGACGCTGGCCGAACTGG
CAGAGGATGCGGCGGCAATGAAGGGCGCCGAGCGGCCCCGCAAGCACCCGCGTACCACCCCGCGGCAGCCGCTGCCGGTG
AAGTACCGGCATCCCAGCAACCGCGCGCTGGCGTGGTCGGGGCGCGGTCGCCAGCCGCACTGGGTCGCGGCCTGGCTTGC
CAACGGGGGGTCGATGGACGCGCTCGCCACCGCTGCCGAAAAGCTTGCGCCCCGTATTCCGCGGGGCATTTCCGGCTGA

Upstream 100 bases:

>100_bases
CGCGCAATGCAACTTTAGTAATATTTCAAAGCACTTCCCCGCATGCGCCCGTGGCATCATTCACACGGGCTTCACGCGTC
GACCGATCGACAAGAGGATC

Downstream 100 bases:

>100_bases
GCGCTGGCGCGCCCGGCCTTTGTTCCACTAGGAGGAGCCTGTCCATGAACAAGATCATCGTCGCCGCCCTGATCTCGACC
TTCGCGCTGTCGGCCCATGC

Product: putative trans-acting regulatory protein HvrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MEIDLKSYTLPQLRALREQTARAIDRLQRSQRETLLRRLSALARAEGLTLAELAEDAAAMKGAERPRKHPRTTPRQPLPV
KYRHPSNRALAWSGRGRQPHWVAAWLANGGSMDALATAAEKLAPRIPRGISG

Sequences:

>Translated_132_residues
MEIDLKSYTLPQLRALREQTARAIDRLQRSQRETLLRRLSALARAEGLTLAELAEDAAAMKGAERPRKHPRTTPRQPLPV
KYRHPSNRALAWSGRGRQPHWVAAWLANGGSMDALATAAEKLAPRIPRGISG
>Mature_132_residues
MEIDLKSYTLPQLRALREQTARAIDRLQRSQRETLLRRLSALARAEGLTLAELAEDAAAMKGAERPRKHPRTTPRQPLPV
KYRHPSNRALAWSGRGRQPHWVAAWLANGGSMDALATAAEKLAPRIPRGISG

Specific function: It is a dim-light trans-acting activator of Puf and Puh expression, but has no effect on the expression of the Puc operon. It is responsible for regulating light-harvesting-I and reaction center structural gene expression differentially from that of light

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone-like protein H-NS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001801 [H]

Pfam domain/function: PF00816 Histone_HNS [H]

EC number: NA

Molecular weight: Translated: 14690; Mature: 14690

Theoretical pI: Translated: 11.97; Mature: 11.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIDLKSYTLPQLRALREQTARAIDRLQRSQRETLLRRLSALARAEGLTLAELAEDAAAM
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KGAERPRKHPRTTPRQPLPVKYRHPSNRALAWSGRGRQPHWVAAWLANGGSMDALATAAE
HCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHH
KLAPRIPRGISG
HHHHHCCCCCCC
>Mature Secondary Structure
MEIDLKSYTLPQLRALREQTARAIDRLQRSQRETLLRRLSALARAEGLTLAELAEDAAAM
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KGAERPRKHPRTTPRQPLPVKYRHPSNRALAWSGRGRQPHWVAAWLANGGSMDALATAAE
HCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHH
KLAPRIPRGISG
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961455 [H]