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The map label for this gene is ybeD [C]

Identifier: 119896474

GI number: 119896474

Start: 198986

End: 199267

Strand: Direct

Name: ybeD [C]

Synonym: azo0182

Alternate gene names: 119896474

Gene position: 198986-199267 (Clockwise)

Preceding gene: 119896473

Following gene: 119896475

Centisome position: 4.55

GC content: 64.89

Gene sequence:

>282_bases
GTGGCTGATCAGACTCCCCAACCCAGACAAACCCTGCTCGAGTTTCCGTGCGACTTCCCGATCAAGATCATGGGCGCGCG
CGTGGACGGTTTCGCGCAGGCGGTGATCGAGGTCGTGCTGCGCCATGCGCCGGACTTCGACCCCGCCGGGGCCGAAATGC
GGCCGTCGAGCAAGGGCAACTACCTCGCCGTCACCTGCACCTTCCGCGCCATCTCGCAGCAGCAGGTCGACGCGCTGTAC
ATGGAGCTGACCTCGCATCCGATGGTGAAGGTGGTGCTGTGA

Upstream 100 bases:

>100_bases
ACGCGGCTCGACGGCCGTCCGGTCGGCAGCGGTGCGCCCGGGCCGCTGGGGCGGCAGATGTACGCCTGGTATCAGGAATT
CAAGAACACGGTGATGCGTA

Downstream 100 bases:

>100_bases
CGGCTGCCGCCGTCCTCGCCGGGCACGAGGGGCCGGCCGCCGCCGTTTCCGTTCCGTTGCTGGTCAAGCGTCTCGGCCGG
GTGGACTACGCCCCGGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MADQTPQPRQTLLEFPCDFPIKIMGARVDGFAQAVIEVVLRHAPDFDPAGAEMRPSSKGNYLAVTCTFRAISQQQVDALY
MELTSHPMVKVVL

Sequences:

>Translated_93_residues
MADQTPQPRQTLLEFPCDFPIKIMGARVDGFAQAVIEVVLRHAPDFDPAGAEMRPSSKGNYLAVTCTFRAISQQQVDALY
MELTSHPMVKVVL
>Mature_92_residues
ADQTPQPRQTLLEFPCDFPIKIMGARVDGFAQAVIEVVLRHAPDFDPAGAEMRPSSKGNYLAVTCTFRAISQQQVDALYM
ELTSHPMVKVVL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

Organism=Escherichia coli, GI1786850, Length=83, Percent_Identity=45.7831325301205, Blast_Score=69, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 10307; Mature: 10176

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADQTPQPRQTLLEFPCDFPIKIMGARVDGFAQAVIEVVLRHAPDFDPAGAEMRPSSKGN
CCCCCCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
YLAVTCTFRAISQQQVDALYMELTSHPMVKVVL
EEEEEEEEEHHCHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
ADQTPQPRQTLLEFPCDFPIKIMGARVDGFAQAVIEVVLRHAPDFDPAGAEMRPSSKGN
CCCCCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
YLAVTCTFRAISQQQVDALYMELTSHPMVKVVL
EEEEEEEEEHHCHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]