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The map label for this gene is nahY [H]

Identifier: 119896422

GI number: 119896422

Start: 145152

End: 146765

Strand: Direct

Name: nahY [H]

Synonym: azo0130

Alternate gene names: 119896422

Gene position: 145152-146765 (Clockwise)

Preceding gene: 119896421

Following gene: 119896423

Centisome position: 3.32

GC content: 69.27

Gene sequence:

>1614_bases
GTGACCATCGCCAAACGCATCGCGCTGCTGCTAGCGCTGTTCACCCTCGCGCTCCTGACAGTAGGCGCCACCGGCGTCCT
TCAGGTCCGTAGCCTCAATCAGGGCTTGCTCTACCAGACCAGCAACATCCTCCCCAGCCTGGCGCGCATTGGCGACCTGC
AACTCCAGGTGATGCGTTTCCGTTCGATCGTGCTCAGCCATGTGCTGGCGACGGAGGCCAAGGAGATGGCCGAGATCGAA
GTTGAACTGGGCAAGGTGCGCCAGGGCATCGAGGAAGGTCTGGTGAAGTACCAGACGCTGGTGTCCGACGAAGAAGACGG
GCGCCGGCTGGCGGCGGTGAGCGCGGCGCTGCGCGGCTATCTGACCTTGGCGGATCACGAGATCGAACTGTCGCGCCAGA
ACCGCAATGAAGAGGCGCGCCGCATGATCGCGACCGAAGGTGCGAAGCATTCGGCCGAGTTGATCGGCGCGCTCGAACGG
CTGGCGGAGTACAACCGCGAACTCGCCGAGCGGTTCGAGCACGAAGCCGAGCGTTCCTTCCGTAACGGCCTCGTGCTGTC
GGTGGGCATGACGCTGGTGGCGATCGCCGGCGGTGCCCTGCTCGGCTTTGCCACCTATCGCCGCGTCGTCGGTTCGCTGG
TGGCGATGAGCGGTGCCGTGCAGGACGTGTCTACCACGCTGGACTTCAGTCGCCGCGTGCCGGTGGAAGGCCGCGACGAG
GTGGCGCAGACCGCGCGCGCCTTCAATGCCCTGCTCGAACGGGTGCAGCAGAGCCTGCGCCAGATGTCGCAGCATGCCTC
CAGCGTGTTCGCGGCCGGCACCAGCCTGGCCGCCTCGGCGCAGCAGGTTTCGGCCGGCTCCAGCGAGCAGAGCGAGGCCG
CGGGCGCGATGGCGGCAGCGGTGGAAGAGATGACCGTCAGCGTCAACCACGTTGCCGACCGCGCCTCCGAAGCGAGCGAA
CTCGCGGCCAGCGCCGGTCGCGATGCCCACGCCGGCGCCGAGGTGATCGGCAAGACGCTCGCCGACATCCGCCGCATCGA
CGCCTCGGTGCGGCAGGCCGCGGAGCGCGTACAGCAGCTGGATGCCGACAGCGCGCGCGTCAGCGCGGTGGTGGCGGTGA
TCAAGGACGTGGCCGACCAGACCAACCTGCTCGCGCTCAACGCCGCGATCGAGGCCGCGCGCGCCGGCGAACAGGGCCGG
GGCTTCGCCGTGGTGGCCGACGAGGTGCGCAAGCTGGCCGAACGTACCGCGCAGTCCACGCAGGAGATCTCCTCCACGAT
GGAAGCGATGCAGAGCGGCGCGCGCAACGCGGTCAGCGGCATGACCGAGGCGGTGGAGCAGGTCGCGCGCGGCGTGGGCC
ATGCGCAGCAGGCGGAGGAGTCGATCCGCCAGATCGAGGCGGGGTCGCGCCGTACCGTGGAGCGGGTGGCGGAGATTTCG
GACGCGATCCGGGAGCAGAGCGAGGCCAGCTCCAACATCGCGCGCCAGGTCGAACGGGTGGCGCAGATGACCGACGAGAA
CAGCGCCGCCGCCGCCAGCACCTCCGACACCGCGGCCGCGCTCAACGGCCTCGCGCGCGACATGCAGAGCGAGGTCTCGC
GCTACCGCGTGTAG

Upstream 100 bases:

>100_bases
ATAAAGCACTCCAGCCCGGGCGGCACACGTCGATTGTCCGGGCGAACGGCGCGGGTTCCAAGCTGCGCGGTTCCGGGGTG
AGCCACCGGAGACCGCCGCC

Downstream 100 bases:

>100_bases
CGCCGGCGGCGGCGGGCGGCAATGCCTCGCCGCCGTCACGGATGCCTGCGGGCGCGGGCCGATGGCGCGGGCGCTGTCGG
GATGGCGTTACCATCGGCGT

Product: putative aromatic hydrocarbon chemotaxis transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 537; Mature: 536

Protein sequence:

>537_residues
MTIAKRIALLLALFTLALLTVGATGVLQVRSLNQGLLYQTSNILPSLARIGDLQLQVMRFRSIVLSHVLATEAKEMAEIE
VELGKVRQGIEEGLVKYQTLVSDEEDGRRLAAVSAALRGYLTLADHEIELSRQNRNEEARRMIATEGAKHSAELIGALER
LAEYNRELAERFEHEAERSFRNGLVLSVGMTLVAIAGGALLGFATYRRVVGSLVAMSGAVQDVSTTLDFSRRVPVEGRDE
VAQTARAFNALLERVQQSLRQMSQHASSVFAAGTSLAASAQQVSAGSSEQSEAAGAMAAAVEEMTVSVNHVADRASEASE
LAASAGRDAHAGAEVIGKTLADIRRIDASVRQAAERVQQLDADSARVSAVVAVIKDVADQTNLLALNAAIEAARAGEQGR
GFAVVADEVRKLAERTAQSTQEISSTMEAMQSGARNAVSGMTEAVEQVARGVGHAQQAEESIRQIEAGSRRTVERVAEIS
DAIREQSEASSNIARQVERVAQMTDENSAAAASTSDTAAALNGLARDMQSEVSRYRV

Sequences:

>Translated_537_residues
MTIAKRIALLLALFTLALLTVGATGVLQVRSLNQGLLYQTSNILPSLARIGDLQLQVMRFRSIVLSHVLATEAKEMAEIE
VELGKVRQGIEEGLVKYQTLVSDEEDGRRLAAVSAALRGYLTLADHEIELSRQNRNEEARRMIATEGAKHSAELIGALER
LAEYNRELAERFEHEAERSFRNGLVLSVGMTLVAIAGGALLGFATYRRVVGSLVAMSGAVQDVSTTLDFSRRVPVEGRDE
VAQTARAFNALLERVQQSLRQMSQHASSVFAAGTSLAASAQQVSAGSSEQSEAAGAMAAAVEEMTVSVNHVADRASEASE
LAASAGRDAHAGAEVIGKTLADIRRIDASVRQAAERVQQLDADSARVSAVVAVIKDVADQTNLLALNAAIEAARAGEQGR
GFAVVADEVRKLAERTAQSTQEISSTMEAMQSGARNAVSGMTEAVEQVARGVGHAQQAEESIRQIEAGSRRTVERVAEIS
DAIREQSEASSNIARQVERVAQMTDENSAAAASTSDTAAALNGLARDMQSEVSRYRV
>Mature_536_residues
TIAKRIALLLALFTLALLTVGATGVLQVRSLNQGLLYQTSNILPSLARIGDLQLQVMRFRSIVLSHVLATEAKEMAEIEV
ELGKVRQGIEEGLVKYQTLVSDEEDGRRLAAVSAALRGYLTLADHEIELSRQNRNEEARRMIATEGAKHSAELIGALERL
AEYNRELAERFEHEAERSFRNGLVLSVGMTLVAIAGGALLGFATYRRVVGSLVAMSGAVQDVSTTLDFSRRVPVEGRDEV
AQTARAFNALLERVQQSLRQMSQHASSVFAAGTSLAASAQQVSAGSSEQSEAAGAMAAAVEEMTVSVNHVADRASEASEL
AASAGRDAHAGAEVIGKTLADIRRIDASVRQAAERVQQLDADSARVSAVVAVIKDVADQTNLLALNAAIEAARAGEQGRG
FAVVADEVRKLAERTAQSTQEISSTMEAMQSGARNAVSGMTEAVEQVARGVGHAQQAEESIRQIEAGSRRTVERVAEISD
AIREQSEASSNIARQVERVAQMTDENSAAAASTSDTAAALNGLARDMQSEVSRYRV

Specific function: May form a pore through which the hemolysin can be exported [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=332, Percent_Identity=29.5180722891566, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1788195, Length=283, Percent_Identity=30.7420494699647, Blast_Score=119, Evalue=6e-28,
Organism=Escherichia coli, GI1788194, Length=340, Percent_Identity=29.7058823529412, Blast_Score=118, Evalue=9e-28,
Organism=Escherichia coli, GI1787690, Length=347, Percent_Identity=30.835734870317, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1789453, Length=274, Percent_Identity=30.2919708029197, Blast_Score=100, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR000727 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 57262; Mature: 57131

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAKRIALLLALFTLALLTVGATGVLQVRSLNQGLLYQTSNILPSLARIGDLQLQVMRF
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RSIVLSHVLATEAKEMAEIEVELGKVRQGIEEGLVKYQTLVSDEEDGRRLAAVSAALRGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LTLADHEIELSRQNRNEEARRMIATEGAKHSAELIGALERLAEYNRELAERFEHEAERSF
HHHCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNGLVLSVGMTLVAIAGGALLGFATYRRVVGSLVAMSGAVQDVSTTLDFSRRVPVEGRDE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VAQTARAFNALLERVQQSLRQMSQHASSVFAAGTSLAASAQQVSAGSSEQSEAAGAMAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VEEMTVSVNHVADRASEASELAASAGRDAHAGAEVIGKTLADIRRIDASVRQAAERVQQL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DADSARVSAVVAVIKDVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAERTAQST
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH
QEISSTMEAMQSGARNAVSGMTEAVEQVARGVGHAQQAEESIRQIEAGSRRTVERVAEIS
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
DAIREQSEASSNIARQVERVAQMTDENSAAAASTSDTAAALNGLARDMQSEVSRYRV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TIAKRIALLLALFTLALLTVGATGVLQVRSLNQGLLYQTSNILPSLARIGDLQLQVMRF
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RSIVLSHVLATEAKEMAEIEVELGKVRQGIEEGLVKYQTLVSDEEDGRRLAAVSAALRGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LTLADHEIELSRQNRNEEARRMIATEGAKHSAELIGALERLAEYNRELAERFEHEAERSF
HHHCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNGLVLSVGMTLVAIAGGALLGFATYRRVVGSLVAMSGAVQDVSTTLDFSRRVPVEGRDE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VAQTARAFNALLERVQQSLRQMSQHASSVFAAGTSLAASAQQVSAGSSEQSEAAGAMAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VEEMTVSVNHVADRASEASELAASAGRDAHAGAEVIGKTLADIRRIDASVRQAAERVQQL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DADSARVSAVVAVIKDVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAERTAQST
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH
QEISSTMEAMQSGARNAVSGMTEAVEQVARGVGHAQQAEESIRQIEAGSRRTVERVAEIS
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
DAIREQSEASSNIARQVERVAQMTDENSAAAASTSDTAAALNGLARDMQSEVSRYRV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2162464; 10952301 [H]