| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is tap [C]
Identifier: 119896421
GI number: 119896421
Start: 143294
End: 144907
Strand: Direct
Name: tap [C]
Synonym: azo0129
Alternate gene names: 119896421
Gene position: 143294-144907 (Clockwise)
Preceding gene: 119896419
Following gene: 119896422
Centisome position: 3.27
GC content: 71.07
Gene sequence:
>1614_bases ATGAGCATTGCCAGGCGAATCGCGCTGTTGCTGGCGATATTGATCGGGGCGCTGGTGGCGCTGGGGACGATGGGCGTGGT GCAGATGAGCCGCGTCAACGAGGGGCTCGTCTATCAGAACGAGAAGATCCTGCCCAAGCTCGACCTGATCGCCGCGACCC AGCGGCGCGCCATCACGTACCGCTTGCTGGTGTTGCGCCACGTCTTGACCACCGACGCGCGCGCGATGGAGGCGGCCGAA GCGCCCTTGCGTCAGCTCGCCAGCGAGATCGACGCTGATCTGCGCAAGTACGAGTCGATGACCGACAGCGACGAGGACCG CCGTCTGCTGCGGGCCGACCGCGAAGCGCTGACGGCCTACGCTGCGGTGGCGGAACGCTCGCTCGCGCACTCGCGCGCCA ACCGCAACGAGGAAGCCTCGGCGCTGGCCAACGGCGAAGCCGCCGAGCGCGGCAACGCGCTGATTGCCGCGCTGGATGCG CACGCGCGCTACAACCGCGAGCTGAACGAAGCCTTTGCGACAGGCGCCGAGGAGACCTTCCGCAGCAGCCGCGCGCTGAC CGTGGCGCTGGTGGTGCTGGCGCTGGCGGCCGGCGGGGGCTTCGGCTTTCTCGCCTACCGGCGCATCGTCGGGGCGCTGT TGGCGATGAGCGCCGCGGTGGAAGGGGTGTCGAGCACGCTGGACTTCAGCCGCCGCGTGCCGGCCGACGGCAAGGACGAG GTGGCGCAGACCGGGCGCGCGTTCAACGCGCTGCTCGAACGCGTGCAGCAGAGCCTGCGCAAGATGTCGACCCATGCCGG CGAAGTCTCGGCGGCAGGTTCCCAGCTGGCCTCGTCGGCGCGCCAGGTGTCGATCGGATCGAGCGCGCAGAGCGAGGCCG CGGCGGCGATGGCGGCCGCCGTCGAGCAGATGACCGTCAGCATCAACCATGTGGCCGACCGCGCCGGCGAGGCCCGCCGG CTGGCGGTGCTGGCCGGCGACGAGGCGCGGGGCGGGGCCGAGGTGATCGGTCTGACGCTGGCCGACATCCGCCGCATCGA CGTTTCGGTACGGCAGGCGGCCGAGCGCGTGCAGCAGCTCGACGAGGACAGCGCGCGCGTCAGCGCGGTCGTCACCGTGA TCAAGGAGGTGGCCGACCAGACCAACCTGCTCGCGCTCAACGCCGCCATCGAGGCGGCGCGCGCGGGTGAGCAGGGGCGG GGTTTCGCGGTGGTGGCGGACGAGGTGCGCAAGCTGGCCGAGCGTACCGCGCAGTCGACGCAGGAGATTTCGTCGACCAT GGAGGCGATGCAGGCCGGCGCGCGCAATGCCACCGGCGGCATGAGCGCGGCAGTCGAGCTGGTCGGCGTCGGCGTCGCCC ACGCCCAGCAGGCGGAGGCATCGGTGCGCCAGATCGAGGACGGCGCGCGGCGCACGGTGGACATCGTGGCCGAAATCTCG GATGCGATCCGCGAGCAGAGCGTGGCCAGTTCCAGCATTGCACAGCAGGTGGAGCGGGTGGCGCAGATGACCGACGAGAA CAGCGCCGCCGCCGCCAGCACCTCCGACACCGCGGTGGGACTGGAGGGGTTGGCGCAGGAGATGCAGGGCGAGGTGGCGC GCTATCGCGTGTAG
Upstream 100 bases:
>100_bases CGGTCAGGAGAGCGTCTTGCTGCGAACTTTCGTCCGCGATCGTCCCCGGCCTGCGCCGCGGTGACGGCCGGGCATGGCCG ACCTTGCCGGAGGAATGAGC
Downstream 100 bases:
>100_bases GCGTGATCCCCGTCGCGGGGGGCACGTCGCGGCGGCTTGATGGCTATAACTTATGGTGTAGTATTGGCGGGCGTCGATCT GTCGTATGTGCGTATTTTTA
Product: putative dipeptide chemoreceptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MSIARRIALLLAILIGALVALGTMGVVQMSRVNEGLVYQNEKILPKLDLIAATQRRAITYRLLVLRHVLTTDARAMEAAE APLRQLASEIDADLRKYESMTDSDEDRRLLRADREALTAYAAVAERSLAHSRANRNEEASALANGEAAERGNALIAALDA HARYNRELNEAFATGAEETFRSSRALTVALVVLALAAGGGFGFLAYRRIVGALLAMSAAVEGVSSTLDFSRRVPADGKDE VAQTGRAFNALLERVQQSLRKMSTHAGEVSAAGSQLASSARQVSIGSSAQSEAAAAMAAAVEQMTVSINHVADRAGEARR LAVLAGDEARGGAEVIGLTLADIRRIDVSVRQAAERVQQLDEDSARVSAVVTVIKEVADQTNLLALNAAIEAARAGEQGR GFAVVADEVRKLAERTAQSTQEISSTMEAMQAGARNATGGMSAAVELVGVGVAHAQQAEASVRQIEDGARRTVDIVAEIS DAIREQSVASSSIAQQVERVAQMTDENSAAAASTSDTAVGLEGLAQEMQGEVARYRV
Sequences:
>Translated_537_residues MSIARRIALLLAILIGALVALGTMGVVQMSRVNEGLVYQNEKILPKLDLIAATQRRAITYRLLVLRHVLTTDARAMEAAE APLRQLASEIDADLRKYESMTDSDEDRRLLRADREALTAYAAVAERSLAHSRANRNEEASALANGEAAERGNALIAALDA HARYNRELNEAFATGAEETFRSSRALTVALVVLALAAGGGFGFLAYRRIVGALLAMSAAVEGVSSTLDFSRRVPADGKDE VAQTGRAFNALLERVQQSLRKMSTHAGEVSAAGSQLASSARQVSIGSSAQSEAAAAMAAAVEQMTVSINHVADRAGEARR LAVLAGDEARGGAEVIGLTLADIRRIDVSVRQAAERVQQLDEDSARVSAVVTVIKEVADQTNLLALNAAIEAARAGEQGR GFAVVADEVRKLAERTAQSTQEISSTMEAMQAGARNATGGMSAAVELVGVGVAHAQQAEASVRQIEDGARRTVDIVAEIS DAIREQSVASSSIAQQVERVAQMTDENSAAAASTSDTAVGLEGLAQEMQGEVARYRV >Mature_536_residues SIARRIALLLAILIGALVALGTMGVVQMSRVNEGLVYQNEKILPKLDLIAATQRRAITYRLLVLRHVLTTDARAMEAAEA PLRQLASEIDADLRKYESMTDSDEDRRLLRADREALTAYAAVAERSLAHSRANRNEEASALANGEAAERGNALIAALDAH ARYNRELNEAFATGAEETFRSSRALTVALVVLALAAGGGFGFLAYRRIVGALLAMSAAVEGVSSTLDFSRRVPADGKDEV AQTGRAFNALLERVQQSLRKMSTHAGEVSAAGSQLASSARQVSIGSSAQSEAAAAMAAAVEQMTVSINHVADRAGEARRL AVLAGDEARGGAEVIGLTLADIRRIDVSVRQAAERVQQLDEDSARVSAVVTVIKEVADQTNLLALNAAIEAARAGEQGRG FAVVADEVRKLAERTAQSTQEISSTMEAMQAGARNATGGMSAAVELVGVGVAHAQQAEASVRQIEDGARRTVDIVAEISD AIREQSVASSSIAQQVERVAQMTDENSAAAASTSDTAVGLEGLAQEMQGEVARYRV
Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI2367378, Length=320, Percent_Identity=29.6875, Blast_Score=115, Evalue=8e-27, Organism=Escherichia coli, GI1788194, Length=453, Percent_Identity=27.1523178807947, Blast_Score=115, Evalue=9e-27, Organism=Escherichia coli, GI1787690, Length=343, Percent_Identity=31.7784256559767, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1788195, Length=278, Percent_Identity=32.3741007194245, Blast_Score=112, Evalue=7e-26, Organism=Escherichia coli, GI1789453, Length=276, Percent_Identity=27.8985507246377, Blast_Score=89, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004010 - InterPro: IPR003122 - InterPro: IPR004089 - InterPro: IPR003660 - InterPro: IPR022094 [H]
Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]
EC number: NA
Molecular weight: Translated: 56625; Mature: 56494
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIARRIALLLAILIGALVALGTMGVVQMSRVNEGLVYQNEKILPKLDLIAATQRRAITY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHH RLLVLRHVLTTDARAMEAAEAPLRQLASEIDADLRKYESMTDSDEDRRLLRADREALTAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AAVAERSLAHSRANRNEEASALANGEAAERGNALIAALDAHARYNRELNEAFATGAEETF HHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHH RSSRALTVALVVLALAAGGGFGFLAYRRIVGALLAMSAAVEGVSSTLDFSRRVPADGKDE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VAQTGRAFNALLERVQQSLRKMSTHAGEVSAAGSQLASSARQVSIGSSAQSEAAAAMAAA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VEQMTVSINHVADRAGEARRLAVLAGDEARGGAEVIGLTLADIRRIDVSVRQAAERVQQL HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEDSARVSAVVTVIKEVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAERTAQST CCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH QEISSTMEAMQAGARNATGGMSAAVELVGVGVAHAQQAEASVRQIEDGARRTVDIVAEIS HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAIREQSVASSSIAQQVERVAQMTDENSAAAASTSDTAVGLEGLAQEMQGEVARYRV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SIARRIALLLAILIGALVALGTMGVVQMSRVNEGLVYQNEKILPKLDLIAATQRRAITY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHH RLLVLRHVLTTDARAMEAAEAPLRQLASEIDADLRKYESMTDSDEDRRLLRADREALTAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AAVAERSLAHSRANRNEEASALANGEAAERGNALIAALDAHARYNRELNEAFATGAEETF HHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHH RSSRALTVALVVLALAAGGGFGFLAYRRIVGALLAMSAAVEGVSSTLDFSRRVPADGKDE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VAQTGRAFNALLERVQQSLRKMSTHAGEVSAAGSQLASSARQVSIGSSAQSEAAAAMAAA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VEQMTVSINHVADRAGEARRLAVLAGDEARGGAEVIGLTLADIRRIDVSVRQAAERVQQL HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEDSARVSAVVTVIKEVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAERTAQST CCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH QEISSTMEAMQAGARNATGGMSAAVELVGVGVAHAQQAEASVRQIEDGARRTVDIVAEIS HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAIREQSVASSSIAQQVERVAQMTDENSAAAASTSDTAVGLEGLAQEMQGEVARYRV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA