| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is trxB [H]
Identifier: 119871514
GI number: 119871514
Start: 5733672
End: 5734673
Strand: Direct
Name: trxB [H]
Synonym: Mkms_5491
Alternate gene names: 119871514
Gene position: 5733672-5734673 (Clockwise)
Preceding gene: 119871513
Following gene: 119871515
Centisome position: 99.94
GC content: 68.26
Gene sequence:
>1002_bases GTGCCGGTGCGAAACGGCAGAAAGGCTCACATGACCAGCTCATCGACGGTTCACGATGTGATCATCATCGGCTCCGGCCC GGCCGGATACACGGCCGCCGTGTACGCCGCGCGCGCACAGCTCAAGCCGCTCGTATTCGAGGGCAGCCAGTTCGGCGGCG CGCTCATGACCACGACCGAGGTGGAGAACTACCCCGGCTTCCGCAACGGCATCACCGGACCCGAACTGATGGACGAGATG CGCGAGCAGGCGCTGCGCTTCGGCGCCGACCTGCGGATGGAGGACGTCGACGAGGTCTCCCTCGACGGCCCCGTCAAGAC GGTCACCGTGGGCGACGAGACCCATCGGGCCCGGGCGGTCATCCTCGCGATGGGTGCCGCCGCACGCCACCTCGGCGTCC CCGGCGAGGACGCGCTGCTCGGCATGGGCGTGAGCACCTGCGCGACCTGCGACGGCTTCTTCTTCCGCGATCAGGACATC GCGGTCATCGGCGGCGGCGACTCGGCGATGGAGGAGGCGACGTTCCTCACCCGCTTCGCGCGCAGCGTGACGGTGATCCA CCGCCGCGAGGAGTTCCGCGCCTCGCGCATCATGCTCGACCGCGCCCGCGCCAACGAGAAGATCACGTTCATGACCAACA CCGCGGTCACCGAGATCGAGGGCGATCCCAAGGTGACCGGAATCCGCTTGCGCGACACCGTGACCGGTGAGGAGTCGAAG CTCGCGGTGACCGGTGTGTTCGTCGCGATCGGGCACGTGCCGCGCTCGGACATCGTGCGTGGTCAGGTCGACGTCGACGA GGACGGCTACGTCCTGGTCGAGGGTCGCACCACCAACACCTCCGTCGAAGGTGTCTTTGCCGCAGGCGATCTCGTGGACC GCACCTACCGGCAGGCGATCACCGCCGCGGGCAGCGGTTGTTCGGCCGCCATCGACGCCGAGCGCTGGCTGGCCGAAATC GGCGTCGCACCAAGCGATCAAGAGATCTCGGCCCCGATCTGA
Upstream 100 bases:
>100_bases CGCGCCGTGCGTCACGCGGGTGGCGGGACACCGGTCGACCGGCCGTAGCGTGACCCTCCAGGCAGTCGGGAACACCCGGA CCTAGGCTGGTGTTGTACCC
Downstream 100 bases:
>100_bases GACATCTGACACACCCCTATCCCGAGGAGCACACATGGCCGACAGCGCCACCGTCACCGTCACCGACGACTCGTTCTCCG AGGACGTGCTGACCAGCAGC
Product: thioredoxin reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MPVRNGRKAHMTSSSTVHDVIIIGSGPAGYTAAVYAARAQLKPLVFEGSQFGGALMTTTEVENYPGFRNGITGPELMDEM REQALRFGADLRMEDVDEVSLDGPVKTVTVGDETHRARAVILAMGAAARHLGVPGEDALLGMGVSTCATCDGFFFRDQDI AVIGGGDSAMEEATFLTRFARSVTVIHRREEFRASRIMLDRARANEKITFMTNTAVTEIEGDPKVTGIRLRDTVTGEESK LAVTGVFVAIGHVPRSDIVRGQVDVDEDGYVLVEGRTTNTSVEGVFAAGDLVDRTYRQAITAAGSGCSAAIDAERWLAEI GVAPSDQEISAPI
Sequences:
>Translated_333_residues MPVRNGRKAHMTSSSTVHDVIIIGSGPAGYTAAVYAARAQLKPLVFEGSQFGGALMTTTEVENYPGFRNGITGPELMDEM REQALRFGADLRMEDVDEVSLDGPVKTVTVGDETHRARAVILAMGAAARHLGVPGEDALLGMGVSTCATCDGFFFRDQDI AVIGGGDSAMEEATFLTRFARSVTVIHRREEFRASRIMLDRARANEKITFMTNTAVTEIEGDPKVTGIRLRDTVTGEESK LAVTGVFVAIGHVPRSDIVRGQVDVDEDGYVLVEGRTTNTSVEGVFAAGDLVDRTYRQAITAAGSGCSAAIDAERWLAEI GVAPSDQEISAPI >Mature_332_residues PVRNGRKAHMTSSSTVHDVIIIGSGPAGYTAAVYAARAQLKPLVFEGSQFGGALMTTTEVENYPGFRNGITGPELMDEMR EQALRFGADLRMEDVDEVSLDGPVKTVTVGDETHRARAVILAMGAAARHLGVPGEDALLGMGVSTCATCDGFFFRDQDIA VIGGGDSAMEEATFLTRFARSVTVIHRREEFRASRIMLDRARANEKITFMTNTAVTEIEGDPKVTGIRLRDTVTGEESKL AVTGVFVAIGHVPRSDIVRGQVDVDEDGYVLVEGRTTNTSVEGVFAAGDLVDRTYRQAITAAGSGCSAAIDAERWLAEIG VAPSDQEISAPI
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=307, Percent_Identity=49.8371335504886, Blast_Score=296, Evalue=2e-81, Organism=Escherichia coli, GI87081763, Length=324, Percent_Identity=33.3333333333333, Blast_Score=160, Evalue=8e-41, Organism=Saccharomyces cerevisiae, GI6320560, Length=317, Percent_Identity=49.5268138801262, Blast_Score=296, Evalue=3e-81, Organism=Saccharomyces cerevisiae, GI6321898, Length=313, Percent_Identity=47.2843450479233, Blast_Score=282, Evalue=7e-77,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 35559; Mature: 35427
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRNGRKAHMTSSSTVHDVIIIGSGPAGYTAAVYAARAQLKPLVFEGSQFGGALMTTTE CCCCCCCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEEEE VENYPGFRNGITGPELMDEMREQALRFGADLRMEDVDEVSLDGPVKTVTVGDETHRARAV CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHEEE ILAMGAAARHLGVPGEDALLGMGVSTCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFA EEEECHHHHHCCCCCCCCEEECCCHHHHCCCCEEEECCCEEEEECCCHHHHHHHHHHHHH RSVTVIHRREEFRASRIMLDRARANEKITFMTNTAVTEIEGDPKVTGIRLRDTVTGEESK HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCEEEEEEEEECCCCCCE LAVTGVFVAIGHVPRSDIVRGQVDVDEDGYVLVEGRTTNTSVEGVFAAGDLVDRTYRQAI EEEEEEEEEECCCCHHHHEECEEEECCCCEEEEECCCCCCCCCEEEECCHHHHHHHHHHH TAAGSGCSAAIDAERWLAEIGVAPSDQEISAPI HHCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PVRNGRKAHMTSSSTVHDVIIIGSGPAGYTAAVYAARAQLKPLVFEGSQFGGALMTTTE CCCCCCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEEEE VENYPGFRNGITGPELMDEMREQALRFGADLRMEDVDEVSLDGPVKTVTVGDETHRARAV CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHEEE ILAMGAAARHLGVPGEDALLGMGVSTCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFA EEEECHHHHHCCCCCCCCEEECCCHHHHCCCCEEEECCCEEEEECCCHHHHHHHHHHHHH RSVTVIHRREEFRASRIMLDRARANEKITFMTNTAVTEIEGDPKVTGIRLRDTVTGEESK HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCEEEEEEEEECCCCCCE LAVTGVFVAIGHVPRSDIVRGQVDVDEDGYVLVEGRTTNTSVEGVFAAGDLVDRTYRQAI EEEEEEEEEECCCCHHHHEECEEEECCCCEEEEECCCCCCCCCEEEECCHHHHHHHHHHH TAAGSGCSAAIDAERWLAEIGVAPSDQEISAPI HHCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9795994 [H]