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The map label for this gene is 119871494

Identifier: 119871494

GI number: 119871494

Start: 5708508

End: 5709170

Strand: Direct

Name: 119871494

Synonym: Mkms_5471

Alternate gene names: NA

Gene position: 5708508-5709170 (Clockwise)

Preceding gene: 119871493

Following gene: 119871495

Centisome position: 99.5

GC content: 69.23

Gene sequence:

>663_bases
ATGCCCAAACGCTACGGAGTCAAGGAGAAGGACCAGGTCGTCGCGTACGTCGTCGACCTGGTCCTGACCGGCCGGTTGCG
CGGCGGGCACCGCATCGACCGCAACGCGATCGCCGAGGCGCTCGGGGTGAGCCGGGTGCCGGTCCAGGAGGCGATGGTCC
AGCTCGAACACGACGGCATCGTGTCGACGCGGTATCACCGGGGTGCGTTCGTCGAACGCTTCGACGCGGCGACGCTGCAC
GAACACCACGAGCTGTACGGCGTGCTCACCGGCATCGCCTCCGCGAGGGCGGCCACCGACCCGAACCCGGAACTGCTCGG
CGAACTCGACGACACGCTGCAGCATATGCGAAAAGGCAAGGATCGCAGGTTGTTCCACGAAGGTTGCCAACGGTTCCGCG
ACATCGTCAACGAAGCGTACGCCGGCCCGCGGCTGCACGCGGCGATCCGCGCGTCGCAGTGTTTCGCGGCGTCGGACTTC
TGGGTGTCCTATCCGCGGGTGCGGGCGGAATTGCTGCCGACCTACCAGCAGGAGGCGACGGCCATCGCCGCGCGGGACGC
CGCCGGCGCACGCACCGCCTGCCTCGAGCGGTCCGACCTCATGGCCACGATCATGGTCGCCGAGCTGACCCGCCGCGGCG
TGCTGGCGGGCGACGGTGGTTAG

Upstream 100 bases:

>100_bases
CTGCTGACCGTCGGCGTCAACGGCCCCGACTACGACCTGACGGCCGCCGAAACGCTGTGCCGCTGGCGGGACAGCCGGTA
GCGGCGCACTCCCCGGCCGG

Downstream 100 bases:

>100_bases
GTTCAAACCCATGAACGTCGGACGGATCGCCGCACTGATCACGACGATGCTGATGGTGGCGACGCTGTGTTGCGCCGCGC
CGGCCGGCGCGCAGGTCGAC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MPKRYGVKEKDQVVAYVVDLVLTGRLRGGHRIDRNAIAEALGVSRVPVQEAMVQLEHDGIVSTRYHRGAFVERFDAATLH
EHHELYGVLTGIASARAATDPNPELLGELDDTLQHMRKGKDRRLFHEGCQRFRDIVNEAYAGPRLHAAIRASQCFAASDF
WVSYPRVRAELLPTYQQEATAIAARDAAGARTACLERSDLMATIMVAELTRRGVLAGDGG

Sequences:

>Translated_220_residues
MPKRYGVKEKDQVVAYVVDLVLTGRLRGGHRIDRNAIAEALGVSRVPVQEAMVQLEHDGIVSTRYHRGAFVERFDAATLH
EHHELYGVLTGIASARAATDPNPELLGELDDTLQHMRKGKDRRLFHEGCQRFRDIVNEAYAGPRLHAAIRASQCFAASDF
WVSYPRVRAELLPTYQQEATAIAARDAAGARTACLERSDLMATIMVAELTRRGVLAGDGG
>Mature_219_residues
PKRYGVKEKDQVVAYVVDLVLTGRLRGGHRIDRNAIAEALGVSRVPVQEAMVQLEHDGIVSTRYHRGAFVERFDAATLHE
HHELYGVLTGIASARAATDPNPELLGELDDTLQHMRKGKDRRLFHEGCQRFRDIVNEAYAGPRLHAAIRASQCFAASDFW
VSYPRVRAELLPTYQQEATAIAARDAAGARTACLERSDLMATIMVAELTRRGVLAGDGG

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 24319; Mature: 24188

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRYGVKEKDQVVAYVVDLVLTGRLRGGHRIDRNAIAEALGVSRVPVQEAMVQLEHDGI
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCC
VSTRYHRGAFVERFDAATLHEHHELYGVLTGIASARAATDPNPELLGELDDTLQHMRKGK
EECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
DRRLFHEGCQRFRDIVNEAYAGPRLHAAIRASQCFAASDFWVSYPRVRAELLPTYQQEAT
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHH
AIAARDAAGARTACLERSDLMATIMVAELTRRGVLAGDGG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PKRYGVKEKDQVVAYVVDLVLTGRLRGGHRIDRNAIAEALGVSRVPVQEAMVQLEHDGI
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCC
VSTRYHRGAFVERFDAATLHEHHELYGVLTGIASARAATDPNPELLGELDDTLQHMRKGK
EECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
DRRLFHEGCQRFRDIVNEAYAGPRLHAAIRASQCFAASDFWVSYPRVRAELLPTYQQEAT
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHH
AIAARDAAGARTACLERSDLMATIMVAELTRRGVLAGDGG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]