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The map label for this gene is ycdM [C]

Identifier: 119871493

GI number: 119871493

Start: 5707694

End: 5708488

Strand: Direct

Name: ycdM [C]

Synonym: Mkms_5470

Alternate gene names: 119871493

Gene position: 5707694-5708488 (Clockwise)

Preceding gene: 119871492

Following gene: 119871494

Centisome position: 99.49

GC content: 68.3

Gene sequence:

>795_bases
ATGACCCCTGCCACACATCCCGTACGCATCGGCGTCCAGCTGCAGCCCCAGCACTCACCGGAGTACCGCCACATCCGCGA
CGCGGTGCGCCGCTGCGAGGACATCGGTGTCGACGTCGCATTCAACTGGGACCACTTCTTCCCGCTGTACGGCGACCCGG
ACGGCGCCCACTACGAATGCTGGACGATGCTGGCCGCGTGGGCCGAGCAGACCTCACGCATCGAGATCGGCGCGCTGGTG
ACCTGCAACTCGTACCGCAACCCGGAACTGCTGGCCGACATGGCGCGCACGGTGGACCACATCAGCGACGGGCGGCTGAT
CCTCGGTATCGGCTCGGGCTGGAAGCAGAAGGACTACGACGAGTACGGCTACGAATTCGGTACGGCGGGAAGCCGACTCG
ACGATCTGGCGCGGGCGCTGCCGCGGATCAAGTCGCGGCTGGCGAAGCTCAATCCCGCACCGACGCGCGAGATCCCGATC
CTGATCGGCGGTCAGGGTGAGCGCAAGACGTTGCGCCTGGTCGCCGAGTACGCCGACATCTGGCACGGCTTCACCGACCG
CACCACCTATCCCGGCAAGGCCGAGGTCCTCGACCGGCACTGTGCCGACGTCGGCCGGGACCCGTCGGCCGTCGAACGCT
CCTCCGGGGTGCCCGAGAGCGGGAAGGACGCGATGCTCGCCGAAGCCGACGCACTCGTCGAACTGGGTGTCACCCTGCTG
ACCGTCGGCGTCAACGGCCCCGACTACGACCTGACGGCCGCCGAAACGCTGTGCCGCTGGCGGGACAGCCGGTAG

Upstream 100 bases:

>100_bases
CGGGCAGACCTTCTACGTCACCGACGAGGACCATCGCATTCAGCTGCGCTTCGGCTGAGCGTCCTGAGGCGACCCGGCAC
CCGCGAGTTACCGTGGCGCT

Downstream 100 bases:

>100_bases
CGGCGCACTCCCCGGCCGGATGCCCAAACGCTACGGAGTCAAGGAGAAGGACCAGGTCGTCGCGTACGTCGTCGACCTGG
TCCTGACCGGCCGGTTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Luciferase Family Protein; Monooxygenase; Oxidoreductase; Luciferase-Like Subgroup; Luciferase-Like Protein; Luciferase; Alkanesulfonate Monooxygenase; MmcI Protein; Luciferase-Like Monooxygenase Superfamily; Flavin-Dependent Oxidoreductase; Fmn-Dependent Monooxygenase; 5 10-Methylenetetrahydromethanopterin Reductase; Luciferase-Like Monooxygenase Superfamily Protein; Dehydrogenase; Luciferase-Like Oxidoreductase; Rif11-Like Protein; FAD Linked Oxidase Domain-Containing Protein; Sugar Transporter Superfamily Protein

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MTPATHPVRIGVQLQPQHSPEYRHIRDAVRRCEDIGVDVAFNWDHFFPLYGDPDGAHYECWTMLAAWAEQTSRIEIGALV
TCNSYRNPELLADMARTVDHISDGRLILGIGSGWKQKDYDEYGYEFGTAGSRLDDLARALPRIKSRLAKLNPAPTREIPI
LIGGQGERKTLRLVAEYADIWHGFTDRTTYPGKAEVLDRHCADVGRDPSAVERSSGVPESGKDAMLAEADALVELGVTLL
TVGVNGPDYDLTAAETLCRWRDSR

Sequences:

>Translated_264_residues
MTPATHPVRIGVQLQPQHSPEYRHIRDAVRRCEDIGVDVAFNWDHFFPLYGDPDGAHYECWTMLAAWAEQTSRIEIGALV
TCNSYRNPELLADMARTVDHISDGRLILGIGSGWKQKDYDEYGYEFGTAGSRLDDLARALPRIKSRLAKLNPAPTREIPI
LIGGQGERKTLRLVAEYADIWHGFTDRTTYPGKAEVLDRHCADVGRDPSAVERSSGVPESGKDAMLAEADALVELGVTLL
TVGVNGPDYDLTAAETLCRWRDSR
>Mature_263_residues
TPATHPVRIGVQLQPQHSPEYRHIRDAVRRCEDIGVDVAFNWDHFFPLYGDPDGAHYECWTMLAAWAEQTSRIEIGALVT
CNSYRNPELLADMARTVDHISDGRLILGIGSGWKQKDYDEYGYEFGTAGSRLDDLARALPRIKSRLAKLNPAPTREIPIL
IGGQGERKTLRLVAEYADIWHGFTDRTTYPGKAEVLDRHCADVGRDPSAVERSSGVPESGKDAMLAEADALVELGVTLLT
VGVNGPDYDLTAAETLCRWRDSR

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29364; Mature: 29233

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPATHPVRIGVQLQPQHSPEYRHIRDAVRRCEDIGVDVAFNWDHFFPLYGDPDGAHYEC
CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEECCCCCCCCCCHHH
WTMLAAWAEQTSRIEIGALVTCNSYRNPELLADMARTVDHISDGRLILGIGSGWKQKDYD
HHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHH
EYGYEFGTAGSRLDDLARALPRIKSRLAKLNPAPTREIPILIGGQGERKTLRLVAEYADI
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
WHGFTDRTTYPGKAEVLDRHCADVGRDPSAVERSSGVPESGKDAMLAEADALVELGVTLL
HCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCEEEE
TVGVNGPDYDLTAAETLCRWRDSR
EEECCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
TPATHPVRIGVQLQPQHSPEYRHIRDAVRRCEDIGVDVAFNWDHFFPLYGDPDGAHYEC
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEECCCCCCCCCCHHH
WTMLAAWAEQTSRIEIGALVTCNSYRNPELLADMARTVDHISDGRLILGIGSGWKQKDYD
HHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHH
EYGYEFGTAGSRLDDLARALPRIKSRLAKLNPAPTREIPILIGGQGERKTLRLVAEYADI
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
WHGFTDRTTYPGKAEVLDRHCADVGRDPSAVERSSGVPESGKDAMLAEADALVELGVTLL
HCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCEEEE
TVGVNGPDYDLTAAETLCRWRDSR
EEECCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA