Definition Mycobacterium sp. KMS chromosome, complete genome.
Accession NC_008705
Length 5,737,227

Click here to switch to the map view.

The map label for this gene is 119871254

Identifier: 119871254

GI number: 119871254

Start: 5469157

End: 5470404

Strand: Direct

Name: 119871254

Synonym: Mkms_5227

Alternate gene names: NA

Gene position: 5469157-5470404 (Clockwise)

Preceding gene: 119871252

Following gene: 119871262

Centisome position: 95.33

GC content: 66.99

Gene sequence:

>1248_bases
GTGGCAGGGTCGGGGGCTGCGTCGGGTTCGGCGTGGCAACGCCGGGTGACGCGGTGGCGGTTCGACCCGCCGCTGAGGAC
GGCCTTCCTGGTCACCGTGCTGGTGGTCGTCCTGATCCTGACGCTGGTGTGGATGCAGTTCCGCGGTGCGTTCACCCCTG
AGGTGAAGCTGCGGATGATCGCCGAGCGGTCCGGCCTCTCGATGGATCCGGGCGCCAAGGTCACCTTCAACGGGGTTCAG
ATCGGTCAGGTGGACACCGTCGAGGAGATCGACGACGACGGTAGGCCCGCCGCCGAACTCGCCCTCGCCCTACGCCCCGA
GTACGTCGACCTCATCCCCGCCAACGCGGAGGTCGCGATCCGGGCCACCACGGTGTTCGGCAACAAGTACATATCCTTCT
CGTCGCCGGAGAACCCGGTCCCCCAGCGCATCTCGAGCAGTGATGTGATCCGCGTCGACTCGGTGTCAACGGAGTTCAAC
ACCCTGTTCGAGACCATCGTGTCGGTGGCCGAGCAGGTCGATCCGATCAAGCTGAACCAGACGTTGACCGCGACGGCCGA
GGCCCTCGACGGTCTCGGTGACCGCTTCGGGCAGTCCCTCATCGACGGCAACACGATCCTGGCCGACCTCAACCCGCAGA
TGCCGCAGATCCGGCGGGACACTCAACTGCTCGCCGATCTCGCCGACGTCTACGGCGACGCCGCCCCCGACCTGTTCGAC
GGTCTCGACAACGCCGTGACCACCGCCCGCACCCTCAACGAACAGCGCGCCAACCTCGACCAGGCTCTGATGTCGGCGGT
CGGGTTCGGCAACACCGGCGGCGACGTGCTCGAACGCGGCGGACCCTATTTCGTGCGCGGCACCAACGACCTCATCCCGG
TGTCCGAGACCCTCGACCGCAACAGCCCGTCGCTGTTCTGCATGATCCGCAACTGGCATGACGCCGAACCGGCCTTCACC
GAGTTCAACGGAGGCAACGGCTACTCGGTGAACCTGCACAACACCGTGCAGGGCGCATCGAACCCGTGGGTGTACCCGGA
CAACCTGCCGCGGGTCAACGCCAAGGGTGGGCCGGAGGGCCGTCCCGGCTGCTGGCAGAAGGTCACCCGTGATCTGTGGC
CGGCGCCGTATCTGGTCCTCGACACCGGCGCGTCCCTGGCCCCCTACAACCACCTCGAGCTCGGCCAGCCGCTGGCCATC
GAGTACGTGTGGGGCCGCCAGATCGGCGAGAACACCATCAACCCGTAA

Upstream 100 bases:

>100_bases
GCAGCCGACGTCTCCCGACTTGCGCCACAGCGCGCCAGTTGGAATAGTTAGATGACTTTGACTGTTGGCCGGCGAACACG
GTCGGGGAAGGTGGTTCACG

Downstream 100 bases:

>100_bases
CGGGTCACCCCACCCGTTCGGCCAGTTCGGCTTCCAGCTTCTCCTCGTAGGCCCCCTCGTCGCGGCCGAGCGCGACCGTC
GCGGCGATCATGGCCGCTGC

Product: virulence factor Mce family protein

Products: NA

Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family A; Virulence Factor; MCE-Family Protein; Mce Family A; MCE Family Protein; Mce-Related Protein; Cell Invasion Protein; MCE-Family; Virulence Factor MCE-Like Protein

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MAGSGAASGSAWQRRVTRWRFDPPLRTAFLVTVLVVVLILTLVWMQFRGAFTPEVKLRMIAERSGLSMDPGAKVTFNGVQ
IGQVDTVEEIDDDGRPAAELALALRPEYVDLIPANAEVAIRATTVFGNKYISFSSPENPVPQRISSSDVIRVDSVSTEFN
TLFETIVSVAEQVDPIKLNQTLTATAEALDGLGDRFGQSLIDGNTILADLNPQMPQIRRDTQLLADLADVYGDAAPDLFD
GLDNAVTTARTLNEQRANLDQALMSAVGFGNTGGDVLERGGPYFVRGTNDLIPVSETLDRNSPSLFCMIRNWHDAEPAFT
EFNGGNGYSVNLHNTVQGASNPWVYPDNLPRVNAKGGPEGRPGCWQKVTRDLWPAPYLVLDTGASLAPYNHLELGQPLAI
EYVWGRQIGENTINP

Sequences:

>Translated_415_residues
MAGSGAASGSAWQRRVTRWRFDPPLRTAFLVTVLVVVLILTLVWMQFRGAFTPEVKLRMIAERSGLSMDPGAKVTFNGVQ
IGQVDTVEEIDDDGRPAAELALALRPEYVDLIPANAEVAIRATTVFGNKYISFSSPENPVPQRISSSDVIRVDSVSTEFN
TLFETIVSVAEQVDPIKLNQTLTATAEALDGLGDRFGQSLIDGNTILADLNPQMPQIRRDTQLLADLADVYGDAAPDLFD
GLDNAVTTARTLNEQRANLDQALMSAVGFGNTGGDVLERGGPYFVRGTNDLIPVSETLDRNSPSLFCMIRNWHDAEPAFT
EFNGGNGYSVNLHNTVQGASNPWVYPDNLPRVNAKGGPEGRPGCWQKVTRDLWPAPYLVLDTGASLAPYNHLELGQPLAI
EYVWGRQIGENTINP
>Mature_414_residues
AGSGAASGSAWQRRVTRWRFDPPLRTAFLVTVLVVVLILTLVWMQFRGAFTPEVKLRMIAERSGLSMDPGAKVTFNGVQI
GQVDTVEEIDDDGRPAAELALALRPEYVDLIPANAEVAIRATTVFGNKYISFSSPENPVPQRISSSDVIRVDSVSTEFNT
LFETIVSVAEQVDPIKLNQTLTATAEALDGLGDRFGQSLIDGNTILADLNPQMPQIRRDTQLLADLADVYGDAAPDLFDG
LDNAVTTARTLNEQRANLDQALMSAVGFGNTGGDVLERGGPYFVRGTNDLIPVSETLDRNSPSLFCMIRNWHDAEPAFTE
FNGGNGYSVNLHNTVQGASNPWVYPDNLPRVNAKGGPEGRPGCWQKVTRDLWPAPYLVLDTGASLAPYNHLELGQPLAIE
YVWGRQIGENTINP

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45200; Mature: 45069

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSGAASGSAWQRRVTRWRFDPPLRTAFLVTVLVVVLILTLVWMQFRGAFTPEVKLRMI
CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEE
AERSGLSMDPGAKVTFNGVQIGQVDTVEEIDDDGRPAAELALALRPEYVDLIPANAEVAI
EHHCCCCCCCCCEEEECCEEECCCCCHHHHCCCCCCHHHHHHHCCCCCEEEECCCCEEEE
RATTVFGNKYISFSSPENPVPQRISSSDVIRVDSVSTEFNTLFETIVSVAEQVDPIKLNQ
EEEEEECCEEEECCCCCCCCHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEECC
TLTATAEALDGLGDRFGQSLIDGNTILADLNPQMPQIRRDTQLLADLADVYGDAAPDLFD
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
GLDNAVTTARTLNEQRANLDQALMSAVGFGNTGGDVLERGGPYFVRGTNDLIPVSETLDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHCC
NSPSLFCMIRNWHDAEPAFTEFNGGNGYSVNLHNTVQGASNPWVYPDNLPRVNAKGGPEG
CCCEEEEEEECCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
RPGCWQKVTRDLWPAPYLVLDTGASLAPYNHLELGQPLAIEYVWGRQIGENTINP
CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCC
>Mature Secondary Structure 
AGSGAASGSAWQRRVTRWRFDPPLRTAFLVTVLVVVLILTLVWMQFRGAFTPEVKLRMI
CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEE
AERSGLSMDPGAKVTFNGVQIGQVDTVEEIDDDGRPAAELALALRPEYVDLIPANAEVAI
EHHCCCCCCCCCEEEECCEEECCCCCHHHHCCCCCCHHHHHHHCCCCCEEEECCCCEEEE
RATTVFGNKYISFSSPENPVPQRISSSDVIRVDSVSTEFNTLFETIVSVAEQVDPIKLNQ
EEEEEECCEEEECCCCCCCCHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEECC
TLTATAEALDGLGDRFGQSLIDGNTILADLNPQMPQIRRDTQLLADLADVYGDAAPDLFD
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
GLDNAVTTARTLNEQRANLDQALMSAVGFGNTGGDVLERGGPYFVRGTNDLIPVSETLDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHCC
NSPSLFCMIRNWHDAEPAFTEFNGGNGYSVNLHNTVQGASNPWVYPDNLPRVNAKGGPEG
CCCEEEEEEECCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
RPGCWQKVTRDLWPAPYLVLDTGASLAPYNHLELGQPLAIEYVWGRQIGENTINP
CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA