| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119871254
Identifier: 119871254
GI number: 119871254
Start: 5469157
End: 5470404
Strand: Direct
Name: 119871254
Synonym: Mkms_5227
Alternate gene names: NA
Gene position: 5469157-5470404 (Clockwise)
Preceding gene: 119871252
Following gene: 119871262
Centisome position: 95.33
GC content: 66.99
Gene sequence:
>1248_bases GTGGCAGGGTCGGGGGCTGCGTCGGGTTCGGCGTGGCAACGCCGGGTGACGCGGTGGCGGTTCGACCCGCCGCTGAGGAC GGCCTTCCTGGTCACCGTGCTGGTGGTCGTCCTGATCCTGACGCTGGTGTGGATGCAGTTCCGCGGTGCGTTCACCCCTG AGGTGAAGCTGCGGATGATCGCCGAGCGGTCCGGCCTCTCGATGGATCCGGGCGCCAAGGTCACCTTCAACGGGGTTCAG ATCGGTCAGGTGGACACCGTCGAGGAGATCGACGACGACGGTAGGCCCGCCGCCGAACTCGCCCTCGCCCTACGCCCCGA GTACGTCGACCTCATCCCCGCCAACGCGGAGGTCGCGATCCGGGCCACCACGGTGTTCGGCAACAAGTACATATCCTTCT CGTCGCCGGAGAACCCGGTCCCCCAGCGCATCTCGAGCAGTGATGTGATCCGCGTCGACTCGGTGTCAACGGAGTTCAAC ACCCTGTTCGAGACCATCGTGTCGGTGGCCGAGCAGGTCGATCCGATCAAGCTGAACCAGACGTTGACCGCGACGGCCGA GGCCCTCGACGGTCTCGGTGACCGCTTCGGGCAGTCCCTCATCGACGGCAACACGATCCTGGCCGACCTCAACCCGCAGA TGCCGCAGATCCGGCGGGACACTCAACTGCTCGCCGATCTCGCCGACGTCTACGGCGACGCCGCCCCCGACCTGTTCGAC GGTCTCGACAACGCCGTGACCACCGCCCGCACCCTCAACGAACAGCGCGCCAACCTCGACCAGGCTCTGATGTCGGCGGT CGGGTTCGGCAACACCGGCGGCGACGTGCTCGAACGCGGCGGACCCTATTTCGTGCGCGGCACCAACGACCTCATCCCGG TGTCCGAGACCCTCGACCGCAACAGCCCGTCGCTGTTCTGCATGATCCGCAACTGGCATGACGCCGAACCGGCCTTCACC GAGTTCAACGGAGGCAACGGCTACTCGGTGAACCTGCACAACACCGTGCAGGGCGCATCGAACCCGTGGGTGTACCCGGA CAACCTGCCGCGGGTCAACGCCAAGGGTGGGCCGGAGGGCCGTCCCGGCTGCTGGCAGAAGGTCACCCGTGATCTGTGGC CGGCGCCGTATCTGGTCCTCGACACCGGCGCGTCCCTGGCCCCCTACAACCACCTCGAGCTCGGCCAGCCGCTGGCCATC GAGTACGTGTGGGGCCGCCAGATCGGCGAGAACACCATCAACCCGTAA
Upstream 100 bases:
>100_bases GCAGCCGACGTCTCCCGACTTGCGCCACAGCGCGCCAGTTGGAATAGTTAGATGACTTTGACTGTTGGCCGGCGAACACG GTCGGGGAAGGTGGTTCACG
Downstream 100 bases:
>100_bases CGGGTCACCCCACCCGTTCGGCCAGTTCGGCTTCCAGCTTCTCCTCGTAGGCCCCCTCGTCGCGGCCGAGCGCGACCGTC GCGGCGATCATGGCCGCTGC
Product: virulence factor Mce family protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family A; Virulence Factor; MCE-Family Protein; Mce Family A; MCE Family Protein; Mce-Related Protein; Cell Invasion Protein; MCE-Family; Virulence Factor MCE-Like Protein
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MAGSGAASGSAWQRRVTRWRFDPPLRTAFLVTVLVVVLILTLVWMQFRGAFTPEVKLRMIAERSGLSMDPGAKVTFNGVQ IGQVDTVEEIDDDGRPAAELALALRPEYVDLIPANAEVAIRATTVFGNKYISFSSPENPVPQRISSSDVIRVDSVSTEFN TLFETIVSVAEQVDPIKLNQTLTATAEALDGLGDRFGQSLIDGNTILADLNPQMPQIRRDTQLLADLADVYGDAAPDLFD GLDNAVTTARTLNEQRANLDQALMSAVGFGNTGGDVLERGGPYFVRGTNDLIPVSETLDRNSPSLFCMIRNWHDAEPAFT EFNGGNGYSVNLHNTVQGASNPWVYPDNLPRVNAKGGPEGRPGCWQKVTRDLWPAPYLVLDTGASLAPYNHLELGQPLAI EYVWGRQIGENTINP
Sequences:
>Translated_415_residues MAGSGAASGSAWQRRVTRWRFDPPLRTAFLVTVLVVVLILTLVWMQFRGAFTPEVKLRMIAERSGLSMDPGAKVTFNGVQ IGQVDTVEEIDDDGRPAAELALALRPEYVDLIPANAEVAIRATTVFGNKYISFSSPENPVPQRISSSDVIRVDSVSTEFN TLFETIVSVAEQVDPIKLNQTLTATAEALDGLGDRFGQSLIDGNTILADLNPQMPQIRRDTQLLADLADVYGDAAPDLFD GLDNAVTTARTLNEQRANLDQALMSAVGFGNTGGDVLERGGPYFVRGTNDLIPVSETLDRNSPSLFCMIRNWHDAEPAFT EFNGGNGYSVNLHNTVQGASNPWVYPDNLPRVNAKGGPEGRPGCWQKVTRDLWPAPYLVLDTGASLAPYNHLELGQPLAI EYVWGRQIGENTINP >Mature_414_residues AGSGAASGSAWQRRVTRWRFDPPLRTAFLVTVLVVVLILTLVWMQFRGAFTPEVKLRMIAERSGLSMDPGAKVTFNGVQI GQVDTVEEIDDDGRPAAELALALRPEYVDLIPANAEVAIRATTVFGNKYISFSSPENPVPQRISSSDVIRVDSVSTEFNT LFETIVSVAEQVDPIKLNQTLTATAEALDGLGDRFGQSLIDGNTILADLNPQMPQIRRDTQLLADLADVYGDAAPDLFDG LDNAVTTARTLNEQRANLDQALMSAVGFGNTGGDVLERGGPYFVRGTNDLIPVSETLDRNSPSLFCMIRNWHDAEPAFTE FNGGNGYSVNLHNTVQGASNPWVYPDNLPRVNAKGGPEGRPGCWQKVTRDLWPAPYLVLDTGASLAPYNHLELGQPLAIE YVWGRQIGENTINP
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45200; Mature: 45069
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSGAASGSAWQRRVTRWRFDPPLRTAFLVTVLVVVLILTLVWMQFRGAFTPEVKLRMI CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEE AERSGLSMDPGAKVTFNGVQIGQVDTVEEIDDDGRPAAELALALRPEYVDLIPANAEVAI EHHCCCCCCCCCEEEECCEEECCCCCHHHHCCCCCCHHHHHHHCCCCCEEEECCCCEEEE RATTVFGNKYISFSSPENPVPQRISSSDVIRVDSVSTEFNTLFETIVSVAEQVDPIKLNQ EEEEEECCEEEECCCCCCCCHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEECC TLTATAEALDGLGDRFGQSLIDGNTILADLNPQMPQIRRDTQLLADLADVYGDAAPDLFD HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH GLDNAVTTARTLNEQRANLDQALMSAVGFGNTGGDVLERGGPYFVRGTNDLIPVSETLDR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHCC NSPSLFCMIRNWHDAEPAFTEFNGGNGYSVNLHNTVQGASNPWVYPDNLPRVNAKGGPEG CCCEEEEEEECCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC RPGCWQKVTRDLWPAPYLVLDTGASLAPYNHLELGQPLAIEYVWGRQIGENTINP CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCC >Mature Secondary Structure AGSGAASGSAWQRRVTRWRFDPPLRTAFLVTVLVVVLILTLVWMQFRGAFTPEVKLRMI CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEE AERSGLSMDPGAKVTFNGVQIGQVDTVEEIDDDGRPAAELALALRPEYVDLIPANAEVAI EHHCCCCCCCCCEEEECCEEECCCCCHHHHCCCCCCHHHHHHHCCCCCEEEECCCCEEEE RATTVFGNKYISFSSPENPVPQRISSSDVIRVDSVSTEFNTLFETIVSVAEQVDPIKLNQ EEEEEECCEEEECCCCCCCCHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEECC TLTATAEALDGLGDRFGQSLIDGNTILADLNPQMPQIRRDTQLLADLADVYGDAAPDLFD HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH GLDNAVTTARTLNEQRANLDQALMSAVGFGNTGGDVLERGGPYFVRGTNDLIPVSETLDR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHCC NSPSLFCMIRNWHDAEPAFTEFNGGNGYSVNLHNTVQGASNPWVYPDNLPRVNAKGGPEG CCCEEEEEEECCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC RPGCWQKVTRDLWPAPYLVLDTGASLAPYNHLELGQPLAIEYVWGRQIGENTINP CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA