| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is ygjT [C]
Identifier: 119871213
GI number: 119871213
Start: 5430945
End: 5431913
Strand: Direct
Name: ygjT [C]
Synonym: Mkms_5186
Alternate gene names: 119871213
Gene position: 5430945-5431913 (Clockwise)
Preceding gene: 119871212
Following gene: 119871214
Centisome position: 94.66
GC content: 63.57
Gene sequence:
>969_bases ATGACGGATCCGGTGATCGTTCCACTGTGGGGCTGGGTCGCGTTGACAGCAGCCATTGCCGTCATGTTGGCAGTGGATCT GTTCCTGCACCGCGACAACCACGTGATCGGGTTCCGGGAAGCCGCCGTCTGGTCCGCCATCTGGATCGCGGCCGGCCTCG GCTTCGGGGCGATCGTCTGGTGGGCGTACGGCGGTGACGTCGCAGGCACCTACTATGCCGGTTACCTCATCGAGAAGGCG CTGTCGGTCGACAACGTCTTCGTGTTCGCCCTGATCTTCACCTACTTCGCCGTTCCGGACGAGTACCAGCACAAAGTCCT GTTCTACGGCGTCATCGGTGCTCTGCTCTTCCGTCTGGTGTTCATCTTCGTCGGCGCCGAATTGCTGGCGGCGTTCTTCT GGACGGCCTACCTGTTCGGCGCCTTCCTCATCTACACCGCCTACAAGATGGCCTTCCAACACGACAAGGACCTGGAGCCC GACAAGAACCTGATGGTGCGTCTGGTCCGCCGCCTGGTCCCGATCGACACTCGATACCACGGGGACCGGCTGTTCACCCG CGTCGACGGCAAACGCGTCGCGACCCTGCTGTTCGTCGTGCTCATCGCGGTGGAGGCGACCGACCTCATCTTCGCGATCG ACTCGGTCGCCGCGGTCCTGGCGATCACGACCAGCACCTTCATCGTGTGGACGGCCAATGCGTTCGCCGTGTTGGGGTTG CGCAGCCTGTACTTCTGCCTGTCCGGCCTGCTGCGACGCTTCACCCACCTGCATTACGGATTGGCGATCCTGCTGGCGTT CGCCGGCGTGAAACTCATCCTCTCGGAGACACCCGTCGGCAAGCTGCCCATCCCGTTGACGCTGTCGGTCATCGTCGTGA CCTTGACCGCCTCCGTCGTGTGGAGCCTGGTCGCCACCCGCGCGAGTGACGCGCCACGGCAGTCCCCGTCACCGAAGCCC AATACGTGA
Upstream 100 bases:
>100_bases CATCGGCGCGCCGCCGTCAGCCCACTGACGACATCCAGCGTCCTCGCGCCGCACGGAATCCATTGGCAGTGAACGTGATC AGATGACGGGAGCAGTATCG
Downstream 100 bases:
>100_bases ATCGGACAGCTAGGATGGCCCCGCAATGGTTGCCACCAAGAAGATCTCGAAGCCGACGGAACGACCGCGGGCGAGGACCC GGTCCGCTCCGGCGGAAAGT
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTDPVIVPLWGWVALTAAIAVMLAVDLFLHRDNHVIGFREAAVWSAIWIAAGLGFGAIVWWAYGGDVAGTYYAGYLIEKA LSVDNVFVFALIFTYFAVPDEYQHKVLFYGVIGALLFRLVFIFVGAELLAAFFWTAYLFGAFLIYTAYKMAFQHDKDLEP DKNLMVRLVRRLVPIDTRYHGDRLFTRVDGKRVATLLFVVLIAVEATDLIFAIDSVAAVLAITTSTFIVWTANAFAVLGL RSLYFCLSGLLRRFTHLHYGLAILLAFAGVKLILSETPVGKLPIPLTLSVIVVTLTASVVWSLVATRASDAPRQSPSPKP NT
Sequences:
>Translated_322_residues MTDPVIVPLWGWVALTAAIAVMLAVDLFLHRDNHVIGFREAAVWSAIWIAAGLGFGAIVWWAYGGDVAGTYYAGYLIEKA LSVDNVFVFALIFTYFAVPDEYQHKVLFYGVIGALLFRLVFIFVGAELLAAFFWTAYLFGAFLIYTAYKMAFQHDKDLEP DKNLMVRLVRRLVPIDTRYHGDRLFTRVDGKRVATLLFVVLIAVEATDLIFAIDSVAAVLAITTSTFIVWTANAFAVLGL RSLYFCLSGLLRRFTHLHYGLAILLAFAGVKLILSETPVGKLPIPLTLSVIVVTLTASVVWSLVATRASDAPRQSPSPKP NT >Mature_321_residues TDPVIVPLWGWVALTAAIAVMLAVDLFLHRDNHVIGFREAAVWSAIWIAAGLGFGAIVWWAYGGDVAGTYYAGYLIEKAL SVDNVFVFALIFTYFAVPDEYQHKVLFYGVIGALLFRLVFIFVGAELLAAFFWTAYLFGAFLIYTAYKMAFQHDKDLEPD KNLMVRLVRRLVPIDTRYHGDRLFTRVDGKRVATLLFVVLIAVEATDLIFAIDSVAAVLAITTSTFIVWTANAFAVLGLR SLYFCLSGLLRRFTHLHYGLAILLAFAGVKLILSETPVGKLPIPLTLSVIVVTLTASVVWSLVATRASDAPRQSPSPKPN T
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=315, Percent_Identity=39.6825396825397, Blast_Score=221, Evalue=5e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 35587; Mature: 35456
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPVIVPLWGWVALTAAIAVMLAVDLFLHRDNHVIGFREAAVWSAIWIAAGLGFGAIVW CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHH WAYGGDVAGTYYAGYLIEKALSVDNVFVFALIFTYFAVPDEYQHKVLFYGVIGALLFRLV EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH FIFVGAELLAAFFWTAYLFGAFLIYTAYKMAFQHDKDLEPDKNLMVRLVRRLVPIDTRYH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC GDRLFTRVDGKRVATLLFVVLIAVEATDLIFAIDSVAAVLAITTSTFIVWTANAFAVLGL CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHH RSLYFCLSGLLRRFTHLHYGLAILLAFAGVKLILSETPVGKLPIPLTLSVIVVTLTASVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHH WSLVATRASDAPRQSPSPKPNT HHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TDPVIVPLWGWVALTAAIAVMLAVDLFLHRDNHVIGFREAAVWSAIWIAAGLGFGAIVW CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHH WAYGGDVAGTYYAGYLIEKALSVDNVFVFALIFTYFAVPDEYQHKVLFYGVIGALLFRLV EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH FIFVGAELLAAFFWTAYLFGAFLIYTAYKMAFQHDKDLEPDKNLMVRLVRRLVPIDTRYH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC GDRLFTRVDGKRVATLLFVVLIAVEATDLIFAIDSVAAVLAITTSTFIVWTANAFAVLGL CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHH RSLYFCLSGLLRRFTHLHYGLAILLAFAGVKLILSETPVGKLPIPLTLSVIVVTLTASVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHH WSLVATRASDAPRQSPSPKPNT HHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA