| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119871212
Identifier: 119871212
GI number: 119871212
Start: 5430303
End: 5430872
Strand: Direct
Name: 119871212
Synonym: Mkms_5185
Alternate gene names: NA
Gene position: 5430303-5430872 (Clockwise)
Preceding gene: 119871211
Following gene: 119871213
Centisome position: 94.65
GC content: 68.07
Gene sequence:
>570_bases ATGGTGTGTGCGGTGGATGTCATGAGCCGCCCGGTGGTGTCGGTGCAATCCTCGACTCCACTGCGGGAAACCGGTTCACT TCTCGCCGATTACGGCTACGCCGGCATACCCGTGGTCGATGAGGATGGCGTCCTGCTGGGCATGGTCACCTCCGGAGACG CGCTGCGTGCAGATCCTGCTCGGCATCACACCGCGGGCGCGGTGATGACAACGCCGGCCGTGGCTGTCGACGCCTCCGCC GATCTCGACGAGGTCGGACGGCTGCTCCTGCAACGCGGTATTCGCAGTGTCCCGGTGGTGGACGACGAGTGTCGGGTTCT CGGTGTCGTGAGCCGGGGTGACCTGTTGCGGCTCAGCGCGACCAGCGACGACGCCATCGCCGTGGGAGTGCAGAAACTGC TCGACGACTACACCGGAAAGCGGCGGTGGATCGCCCAGGTGCGCGAAGGCGACGTCACCGTCGCCGGCCCGTTCGACGAC GACTCGGAACGCCGGATCGCTCTCGCACTGGCCCGCATGGTTCCGGGCGCGCGCGAGGTGCGCATCGGCGCGCCGCCGTC AGCCCACTGA
Upstream 100 bases:
>100_bases CCGACTCGGCAACCGCCCCTGCCGCCGCACGATTTATTGCGAAGTTTATTTCGTGTGTTACTATTCACGTATGTCACAAC CGGTACTGGGAAACGGCAGC
Downstream 100 bases:
>100_bases CGACATCCAGCGTCCTCGCGCCGCACGGAATCCATTGGCAGTGAACGTGATCAGATGACGGGAGCAGTATCGATGACGGA TCCGGTGATCGTTCCACTGT
Product: signal-transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MVCAVDVMSRPVVSVQSSTPLRETGSLLADYGYAGIPVVDEDGVLLGMVTSGDALRADPARHHTAGAVMTTPAVAVDASA DLDEVGRLLLQRGIRSVPVVDDECRVLGVVSRGDLLRLSATSDDAIAVGVQKLLDDYTGKRRWIAQVREGDVTVAGPFDD DSERRIALALARMVPGAREVRIGAPPSAH
Sequences:
>Translated_189_residues MVCAVDVMSRPVVSVQSSTPLRETGSLLADYGYAGIPVVDEDGVLLGMVTSGDALRADPARHHTAGAVMTTPAVAVDASA DLDEVGRLLLQRGIRSVPVVDDECRVLGVVSRGDLLRLSATSDDAIAVGVQKLLDDYTGKRRWIAQVREGDVTVAGPFDD DSERRIALALARMVPGAREVRIGAPPSAH >Mature_189_residues MVCAVDVMSRPVVSVQSSTPLRETGSLLADYGYAGIPVVDEDGVLLGMVTSGDALRADPARHHTAGAVMTTPAVAVDASA DLDEVGRLLLQRGIRSVPVVDDECRVLGVVSRGDLLRLSATSDDAIAVGVQKLLDDYTGKRRWIAQVREGDVTVAGPFDD DSERRIALALARMVPGAREVRIGAPPSAH
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR002708 - InterPro: IPR016426 - ProDom: PD011569 [H]
Pfam domain/function: PF00571 CBS; PF01837 DUF39 [H]
EC number: NA
Molecular weight: Translated: 19911; Mature: 19911
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCAVDVMSRPVVSVQSSTPLRETGSLLADYGYAGIPVVDEDGVLLGMVTSGDALRADPA CEEEEECCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEECCCCEEEEEEECCCCCCCCCC RHHTAGAVMTTPAVAVDASADLDEVGRLLLQRGIRSVPVVDDECRVLGVVSRGDLLRLSA CCCCCCEEEECCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEC TSDDAIAVGVQKLLDDYTGKRRWIAQVREGDVTVAGPFDDDSERRIALALARMVPGAREV CCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEE RIGAPPSAH EECCCCCCC >Mature Secondary Structure MVCAVDVMSRPVVSVQSSTPLRETGSLLADYGYAGIPVVDEDGVLLGMVTSGDALRADPA CEEEEECCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEECCCCEEEEEEECCCCCCCCCC RHHTAGAVMTTPAVAVDASADLDEVGRLLLQRGIRSVPVVDDECRVLGVVSRGDLLRLSA CCCCCCEEEECCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEC TSDDAIAVGVQKLLDDYTGKRRWIAQVREGDVTVAGPFDDDSERRIALALARMVPGAREV CCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEE RIGAPPSAH EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]