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The map label for this gene is ppe28 [H]

Identifier: 119871066

GI number: 119871066

Start: 5279774

End: 5281015

Strand: Direct

Name: ppe28 [H]

Synonym: Mkms_5039

Alternate gene names: 119871066

Gene position: 5279774-5281015 (Clockwise)

Preceding gene: 119871065

Following gene: 119871070

Centisome position: 92.03

GC content: 69.57

Gene sequence:

>1242_bases
TTGGCCAAACATCGCAAGGCGCGGCGCACAGCTGCCGCCCCCGCCTTCTTCGCCGGCGCCACCGCCGCGATCTCCACCGC
GCTCGCCCTGGGCCACGCCACCAACGCGACCGCCGCCACGATTCCCACCGCTGACACGGTGATCGGTGTCGGCGGCTGGC
GGAACCCGACGAGCGACCGGATCCCGAACAAGTTCGAGGGCGAGTTGGTACAGCCCGGGGAGACGTTCGTCGGGGTCCAG
TACCCGGCGGAACTGCCCGTGGACCCCAGCGTGGCCGCCGGTCAGAAACCGTTGGGCGACGCGGTCGACGCCGCCTCCGG
TTCCGTGCTGATCGTCGGCTACTCGGAGGGTTCGCTGGTCGCCGAGCGGTACAAGCGCGGACTCGTCGCGTCCGGTGCGC
CGAACACCGATGACGTCGCGTTCATGTTCATCGCCGCCCCGTTCGTCCCCAACGGCGGCGTCTACTCCCGATTCCCCGGT
CTGCGGCTCCCCGGCTTCACGAGCACCGGTGCCGCGGCGCCGTCACCTTACGACGAGACGTTCGTGACGCTCGAGTACGA
CCTGATCGGCGACTTCCCGGCGTATGCGAACCCGCTGTCACTCGCCAACGCCCTCGCGGGTCTGGTCTACGTGCACGGCG
ACCAGGGCCCCGACAACGTCGACCTGGAGACCGCCCCGAAGGCGGTGAAGGTGGTCACCAGCGAGGCGGGCGGCACCGAC
ACCTACATCCTGGTCCGTGCCGAACATCTGCCGCTGCTGCAGCCGATCCGCGATCTGGCGGCCGCCACCGGCACCACCGT
GGTGGTCGAACCGTTCGTCGGCGCCGTCGAACCGACGCTGCGCCTGCTCGTCGACATGGGCTACACCGACCGCGACTACC
AGAACGCGGACAAGCCGACGCGGTTCTCGCTGATCACCCCGCCCGATCGGATCATCGAGACCGCCGCGGCCATGAAGAAG
GTCGCGCCGAAGGCCGTTGCGCCCGACGAGAAGCCGGCCGAGCAGTCCGAACCCGAGCCGCAGAAGGCCGACGAACCCGA
GAGCAAGCCTTCGGTGAAGCGGAACACGTTGCTGCGCAATGTCTTCGGCGGACCCAAGGGCAAGCACCGGGCCGACACCA
CACCGGCAGCCGAACCGGAGCCGTCACGCCAGGACTCCGCGACGAACGACCCCGCCGACAACGGCACCACCGGTACCGAC
AGCGACACCAGCACCGACGAGAAGGACCAGCCCGCCGCCTGA

Upstream 100 bases:

>100_bases
AGAGACGGCGGCGGGCCGACGGTCCGCCGCCGTCTTTTGTTTGCTGTGCGGTAGCCTTCGAGTCCGGCGCTCTTCGCCCA
CGCTCCCAGAAAGCACGACC

Downstream 100 bases:

>100_bases
GGCGTCCTCACGCGGGCGAGGTCGACCCCACCCGGTCCTCGGCGTAGAGGTGCACCAGACCGGAGGCCACCGCGAACCGC
GGACCGTGCACCCCGTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MAKHRKARRTAAAPAFFAGATAAISTALALGHATNATAATIPTADTVIGVGGWRNPTSDRIPNKFEGELVQPGETFVGVQ
YPAELPVDPSVAAGQKPLGDAVDAASGSVLIVGYSEGSLVAERYKRGLVASGAPNTDDVAFMFIAAPFVPNGGVYSRFPG
LRLPGFTSTGAAAPSPYDETFVTLEYDLIGDFPAYANPLSLANALAGLVYVHGDQGPDNVDLETAPKAVKVVTSEAGGTD
TYILVRAEHLPLLQPIRDLAAATGTTVVVEPFVGAVEPTLRLLVDMGYTDRDYQNADKPTRFSLITPPDRIIETAAAMKK
VAPKAVAPDEKPAEQSEPEPQKADEPESKPSVKRNTLLRNVFGGPKGKHRADTTPAAEPEPSRQDSATNDPADNGTTGTD
SDTSTDEKDQPAA

Sequences:

>Translated_413_residues
MAKHRKARRTAAAPAFFAGATAAISTALALGHATNATAATIPTADTVIGVGGWRNPTSDRIPNKFEGELVQPGETFVGVQ
YPAELPVDPSVAAGQKPLGDAVDAASGSVLIVGYSEGSLVAERYKRGLVASGAPNTDDVAFMFIAAPFVPNGGVYSRFPG
LRLPGFTSTGAAAPSPYDETFVTLEYDLIGDFPAYANPLSLANALAGLVYVHGDQGPDNVDLETAPKAVKVVTSEAGGTD
TYILVRAEHLPLLQPIRDLAAATGTTVVVEPFVGAVEPTLRLLVDMGYTDRDYQNADKPTRFSLITPPDRIIETAAAMKK
VAPKAVAPDEKPAEQSEPEPQKADEPESKPSVKRNTLLRNVFGGPKGKHRADTTPAAEPEPSRQDSATNDPADNGTTGTD
SDTSTDEKDQPAA
>Mature_412_residues
AKHRKARRTAAAPAFFAGATAAISTALALGHATNATAATIPTADTVIGVGGWRNPTSDRIPNKFEGELVQPGETFVGVQY
PAELPVDPSVAAGQKPLGDAVDAASGSVLIVGYSEGSLVAERYKRGLVASGAPNTDDVAFMFIAAPFVPNGGVYSRFPGL
RLPGFTSTGAAAPSPYDETFVTLEYDLIGDFPAYANPLSLANALAGLVYVHGDQGPDNVDLETAPKAVKVVTSEAGGTDT
YILVRAEHLPLLQPIRDLAAATGTTVVVEPFVGAVEPTLRLLVDMGYTDRDYQNADKPTRFSLITPPDRIIETAAAMKKV
APKAVAPDEKPAEQSEPEPQKADEPESKPSVKRNTLLRNVFGGPKGKHRADTTPAAEPEPSRQDSATNDPADNGTTGTDS
DTSTDEKDQPAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PPE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013228
- InterPro:   IPR000030 [H]

Pfam domain/function: PF08237 PE-PPE; PF00823 PPE [H]

EC number: NA

Molecular weight: Translated: 43158; Mature: 43027

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKHRKARRTAAAPAFFAGATAAISTALALGHATNATAATIPTADTVIGVGGWRNPTSDR
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEECCCCCCCCCCC
IPNKFEGELVQPGETFVGVQYPAELPVDPSVAAGQKPLGDAVDAASGSVLIVGYSEGSLV
CCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCHH
AERYKRGLVASGAPNTDDVAFMFIAAPFVPNGGVYSRFPGLRLPGFTSTGAAAPSPYDET
HHHHHCCEEECCCCCCCCEEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCE
FVTLEYDLIGDFPAYANPLSLANALAGLVYVHGDQGPDNVDLETAPKAVKVVTSEAGGTD
EEEEEEEEECCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC
TYILVRAEHLPLLQPIRDLAAATGTTVVVEPFVGAVEPTLRLLVDMGYTDRDYQNADKPT
EEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
RFSLITPPDRIIETAAAMKKVAPKAVAPDEKPAEQSEPEPQKADEPESKPSVKRNTLLRN
EEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VFGGPKGKHRADTTPAAEPEPSRQDSATNDPADNGTTGTDSDTSTDEKDQPAA
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKHRKARRTAAAPAFFAGATAAISTALALGHATNATAATIPTADTVIGVGGWRNPTSDR
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEECCCCCCCCCCC
IPNKFEGELVQPGETFVGVQYPAELPVDPSVAAGQKPLGDAVDAASGSVLIVGYSEGSLV
CCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCHH
AERYKRGLVASGAPNTDDVAFMFIAAPFVPNGGVYSRFPGLRLPGFTSTGAAAPSPYDET
HHHHHCCEEECCCCCCCCEEEEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCE
FVTLEYDLIGDFPAYANPLSLANALAGLVYVHGDQGPDNVDLETAPKAVKVVTSEAGGTD
EEEEEEEEECCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC
TYILVRAEHLPLLQPIRDLAAATGTTVVVEPFVGAVEPTLRLLVDMGYTDRDYQNADKPT
EEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
RFSLITPPDRIIETAAAMKKVAPKAVAPDEKPAEQSEPEPQKADEPESKPSVKRNTLLRN
EEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VFGGPKGKHRADTTPAAEPEPSRQDSATNDPADNGTTGTDSDTSTDEKDQPAA
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]