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The map label for this gene is lpqH [H]

Identifier: 119871065

GI number: 119871065

Start: 5279179

End: 5279658

Strand: Direct

Name: lpqH [H]

Synonym: Mkms_5038

Alternate gene names: 119871065

Gene position: 5279179-5279658 (Clockwise)

Preceding gene: 119871058

Following gene: 119871066

Centisome position: 92.02

GC content: 68.33

Gene sequence:

>480_bases
GTGAGCGTGGGCGGCGCGGCGATCGTGATCGCAGGCCTGGCGGGCTGTTCCTCGGACAGCGGTTCCTCCGAGTCGACCAC
ATCGGCGGAGTCGAGCGACACCGCCACGGCGAGCGCATCGGCGGAGGCCACCTCGGCTCCCGGCGCCGCAAAGGTCGTGA
TCGACGGTCAGGACCAGAACATCCAGGGCACCGTCGCCTGCACCTCCATGGGCGGCAACCTCAACATCGCCATCGGTCAG
GCCACCACCGGGATCGGCGCGGTGGTGACCGAGGCCGATCCGCCGACCGTGCAGTCGGTCGGACTCGGCAACGTCAACGG
CGTGACCCTCGGCTTCCAGCAGGGCACCGGGCAGGGCAACGCCGAGGTGGAGAAGGACGACAAGACCTACAACATCAAGG
GCAATGCGACCGGCGTCGACATGGCCAACCCGCTGCAGCCGGTGACCAAACCGTTCGAGATCGAGGTCACCTGCCCGTAG

Upstream 100 bases:

>100_bases
TCGGCGGAGGCCCGCACACCGATACTGCTCGGGACGGCCCCGGCATTGACGACGGGGCCGCGTAGACCGAAGGAGATCGA
TTGTGAAACGTGGGTTCCTG

Downstream 100 bases:

>100_bases
TACTTGCGTATGCACAGAGACGGCGGCGGGCCGACGGTCCGCCGCCGTCTTTTGTTTGCTGTGCGGTAGCCTTCGAGTCC
GGCGCTCTTCGCCCACGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: 19 kDa lipoprotein antigen [H]

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSVGGAAIVIAGLAGCSSDSGSSESTTSAESSDTATASASAEATSAPGAAKVVIDGQDQNIQGTVACTSMGGNLNIAIGQ
ATTGIGAVVTEADPPTVQSVGLGNVNGVTLGFQQGTGQGNAEVEKDDKTYNIKGNATGVDMANPLQPVTKPFEIEVTCP

Sequences:

>Translated_159_residues
MSVGGAAIVIAGLAGCSSDSGSSESTTSAESSDTATASASAEATSAPGAAKVVIDGQDQNIQGTVACTSMGGNLNIAIGQ
ATTGIGAVVTEADPPTVQSVGLGNVNGVTLGFQQGTGQGNAEVEKDDKTYNIKGNATGVDMANPLQPVTKPFEIEVTCP
>Mature_158_residues
SVGGAAIVIAGLAGCSSDSGSSESTTSAESSDTATASASAEATSAPGAAKVVIDGQDQNIQGTVACTSMGGNLNIAIGQA
TTGIGAVVTEADPPTVQSVGLGNVNGVTLGFQQGTGQGNAEVEKDDKTYNIKGNATGVDMANPLQPVTKPFEIEVTCP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial 19 kDa antigen family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008691 [H]

Pfam domain/function: PF05481 Myco_19_kDa [H]

EC number: NA

Molecular weight: Translated: 15477; Mature: 15346

Theoretical pI: Translated: 3.71; Mature: 3.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVGGAAIVIAGLAGCSSDSGSSESTTSAESSDTATASASAEATSAPGAAKVVIDGQDQN
CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
IQGTVACTSMGGNLNIAIGQATTGIGAVVTEADPPTVQSVGLGNVNGVTLGFQQGTGQGN
EEEEEEEEECCCEEEEEEECCCCCCEEEEECCCCCCEEEECCCCCCEEEEEEECCCCCCC
AEVEKDDKTYNIKGNATGVDMANPLQPVTKPFEIEVTCP
CEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
SVGGAAIVIAGLAGCSSDSGSSESTTSAESSDTATASASAEATSAPGAAKVVIDGQDQN
CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
IQGTVACTSMGGNLNIAIGQATTGIGAVVTEADPPTVQSVGLGNVNGVTLGFQQGTGQGN
EEEEEEEEECCCEEEEEEECCCCCCEEEEECCCCCCEEEECCCCCCEEEEEEECCCCCCC
AEVEKDDKTYNIKGNATGVDMANPLQPVTKPFEIEVTCP
CEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2230723; 12788972 [H]