| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119871048
Identifier: 119871048
GI number: 119871048
Start: 5260758
End: 5261438
Strand: Direct
Name: 119871048
Synonym: Mkms_5021
Alternate gene names: NA
Gene position: 5260758-5261438 (Clockwise)
Preceding gene: 119871045
Following gene: 119871054
Centisome position: 91.7
GC content: 68.43
Gene sequence:
>681_bases ATGGACATGCCGAATCCGAGCAACGACGTCTGGGAAGTGCTGTCCACCGCGCGCTCCATCCGCCGCTTCACCGACGATCC GGTCGCCGACGACGTGCTCGAACGCTGCCTCGAGGCGGCGACGTGGGCACCGAACGGTGCGAATGCGCAGCTCTGGCGCT TCGTCGTCCTCGACGCGCCCGACCAGCGGGCCGCGGTCGCCAAGGCGGCCCAGATCGCTCTGCAGACAATCGAATCGGTG TACGGCATGACCAGGCCGGCCGACGACGACCACAGCCGCGCGGCACGAAACAACCGGGCCACCTACGAACTCCACGACCG TGCCGGTCAGCACACGTCGGTGTTGTTCACTGCCTTCAAGAACGAGTTCGCGTCCGAGTACCTGCAGGCCGGGTCGATCT ATCCGGCCATGGAGAACTTCTATCTCGCCGCCCGCGCCCAGGGGCTCGGCGCGTGCTTCACCAGTTGGGCGTCCTATGCC GGCGAACAGGTACTCCGCGATGCCATCGGTATCCCGGACGAGTGGTTCCTGGCCGGACACCTCGTCGTCGGCTGGCCGCG CGGGAGCCACGGACCGGTGCGCCGGCGGCCCCTGTCCGACGTGGTGTTCCGGAACACCTGGGATCCCGAGCGCGCGGACA TCACGTACGGACGCGGCGCGCGGCCCCGCGGCAAGAGCTAA
Upstream 100 bases:
>100_bases CCTGTCGCTCACAGCGTCACTCCCGTCTCCGCACTATTGTGTGCAGTACGAATGTACAGCATCGTGATGCTCGACAACCC GGCTTGCGTCGAGTACACCA
Downstream 100 bases:
>100_bases CCGGCGCGCGCCAACTCGCTGAGCAGTCCACGGGTGCGCTTCAGCGACGCCGACAGCTGCGCCCGATCGGCGCCCACGGC GACCGGCTGCGCCCACACGT
Product: nitroreductase
Products: NA
Alternate protein names: Nitroreductase Family Protein
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MDMPNPSNDVWEVLSTARSIRRFTDDPVADDVLERCLEAATWAPNGANAQLWRFVVLDAPDQRAAVAKAAQIALQTIESV YGMTRPADDDHSRAARNNRATYELHDRAGQHTSVLFTAFKNEFASEYLQAGSIYPAMENFYLAARAQGLGACFTSWASYA GEQVLRDAIGIPDEWFLAGHLVVGWPRGSHGPVRRRPLSDVVFRNTWDPERADITYGRGARPRGKS
Sequences:
>Translated_226_residues MDMPNPSNDVWEVLSTARSIRRFTDDPVADDVLERCLEAATWAPNGANAQLWRFVVLDAPDQRAAVAKAAQIALQTIESV YGMTRPADDDHSRAARNNRATYELHDRAGQHTSVLFTAFKNEFASEYLQAGSIYPAMENFYLAARAQGLGACFTSWASYA GEQVLRDAIGIPDEWFLAGHLVVGWPRGSHGPVRRRPLSDVVFRNTWDPERADITYGRGARPRGKS >Mature_226_residues MDMPNPSNDVWEVLSTARSIRRFTDDPVADDVLERCLEAATWAPNGANAQLWRFVVLDAPDQRAAVAKAAQIALQTIESV YGMTRPADDDHSRAARNNRATYELHDRAGQHTSVLFTAFKNEFASEYLQAGSIYPAMENFYLAARAQGLGACFTSWASYA GEQVLRDAIGIPDEWFLAGHLVVGWPRGSHGPVRRRPLSDVVFRNTWDPERADITYGRGARPRGKS
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25139; Mature: 25139
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMPNPSNDVWEVLSTARSIRRFTDDPVADDVLERCLEAATWAPNGANAQLWRFVVLDAP CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECC DQRAAVAKAAQIALQTIESVYGMTRPADDDHSRAARNNRATYELHDRAGQHTSVLFTAFK CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEHHHCCCHHHHHHHHHH NEFASEYLQAGSIYPAMENFYLAARAQGLGACFTSWASYAGEQVLRDAIGIPDEWFLAGH HHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECE LVVGWPRGSHGPVRRRPLSDVVFRNTWDPERADITYGRGARPRGKS EEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDMPNPSNDVWEVLSTARSIRRFTDDPVADDVLERCLEAATWAPNGANAQLWRFVVLDAP CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECC DQRAAVAKAAQIALQTIESVYGMTRPADDDHSRAARNNRATYELHDRAGQHTSVLFTAFK CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEHHHCCCHHHHHHHHHH NEFASEYLQAGSIYPAMENFYLAARAQGLGACFTSWASYAGEQVLRDAIGIPDEWFLAGH HHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECE LVVGWPRGSHGPVRRRPLSDVVFRNTWDPERADITYGRGARPRGKS EEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA