| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870902
Identifier: 119870902
GI number: 119870902
Start: 5105657
End: 5106937
Strand: Direct
Name: 119870902
Synonym: Mkms_4874
Alternate gene names: NA
Gene position: 5105657-5106937 (Clockwise)
Preceding gene: 119870901
Following gene: 119870903
Centisome position: 88.99
GC content: 73.93
Gene sequence:
>1281_bases GTGACCGACGCGGCGCCGTCGACCGGCCCGGTCACGCGGAGCAGCGTGGCGCGGGTCGGCATCGCGACGGCCGTGACCGC GCTGTGCGGCTACGCGGTGCTCTATCTGGCGGCCCGCGACCTGGAACCCGAGGGCTTTTCGGTGTTCGGGGTGTTCTGGG GGGCCTTCGGTCTGGCCAGCGGGGCGGCATTCGGCCTGCTGCAGGAGGCGACGCGGGAGGTCCGCGACGCCCGGGTGGAG CACGCGGGCGACGGTCCACACACCCACCCCGTGCGGATCGGCGCGGTGGTGGGCGTCGTCGCCGCCGTCCTCATCGTGGT GACGGCGCCGCTGTGGGCGGGCCGCGTGTTCGTCGAGGCGCGGTGGCTGTCGGTGCTGCTGCTCAGCGCCGGACTGGCGG GGTTCTGCGTGCACGCGACGCTGCTCGGCATGCTGGCCGGCGTCAACCGCTGGACGCAGTACGGGGCGCTCATGGTGACC GACGCGGTGATCCGTGTCCTGGTGGCCGTGGCGACGTTCGCCGTCGGCTGGGGTCTCGGCGGATTCCTGTGGGCCACCGT CGGCGGGGCGATCGCCTGGCTGCTCCTGCTCATCTGCTCCCCCGCCACCCGGGCCGCCGCGCGCCTGCGCACGCCGGGCA GTACAGCGACGTTCCTGCGCGGCGCCGCGCACTCGATCGCCGCCGCGGGTGCCAGCGCCGTCCTGGTGATGGGGTTCCCC GTCCTGCTCAAGGCGACGTCGGACGATCTCGGCGCCGCCGGCGGTGTGGTGATCCTGGCCGTGACGCTGACCCGGGCGCC GCTGCTGGTGCCGTTGACGGCGATGCAGGGCAACCTGATCGCCCACTTCGTCGACCAGCGCAGCGCACGCCTGCGCGCCC TGGTGGCGCCGTCGGCTCTGGTGCTGGGACTCGGCACGCTCGGCGTGATCGCCGCGGGACTGCTCGGGCCGTGGCTGCTG CGCGCGGGGTTCGGCGAGCAGTACCAGGCCGACGGCGCGCTGCTGGCCTGGTTGACGACGGCGGCGGTGGCGATCGCGCT GCTGACTTTGACCGGCGCGGCGACCGTCGCCGCCGCCATGCACCGCACGTACGCGTTGGGGTGGGTGGGCGCCACGGTGG CGGCGGTGCTGTTGCTGCTGCTGCCGCTGGACCTGGAGACCAGGACCGTGGTTGCGTTGCTGTGCGGTCCGCTGGTCGGG ATCGCCGTGCACCTCGCCGGACTTGCGGGCGCACCGGACCGCACGCATATCCTGCGTTCTCGACGAAGGAGGGCTCCATG A
Upstream 100 bases:
>100_bases CGTTCACCGACGACTTCACCGGTCTGGCAGCCAATTACGCCGACGAGTCACTGCGCCCGCTGTGGGATGCCTGGCTCTAC GCCGAGGATCTGCCGAAGCT
Downstream 100 bases:
>100_bases CCTGGCTCGTGACCGGCGGCGCCGGCTACATCGGCTCGCACGTCGTCCGGGCGTTGACCGAGGCCGACCTGCCGGTCGTC GTGATCGACGACCTGTCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTDAAPSTGPVTRSSVARVGIATAVTALCGYAVLYLAARDLEPEGFSVFGVFWGAFGLASGAAFGLLQEATREVRDARVE HAGDGPHTHPVRIGAVVGVVAAVLIVVTAPLWAGRVFVEARWLSVLLLSAGLAGFCVHATLLGMLAGVNRWTQYGALMVT DAVIRVLVAVATFAVGWGLGGFLWATVGGAIAWLLLLICSPATRAAARLRTPGSTATFLRGAAHSIAAAGASAVLVMGFP VLLKATSDDLGAAGGVVILAVTLTRAPLLVPLTAMQGNLIAHFVDQRSARLRALVAPSALVLGLGTLGVIAAGLLGPWLL RAGFGEQYQADGALLAWLTTAAVAIALLTLTGAATVAAAMHRTYALGWVGATVAAVLLLLLPLDLETRTVVALLCGPLVG IAVHLAGLAGAPDRTHILRSRRRRAP
Sequences:
>Translated_426_residues MTDAAPSTGPVTRSSVARVGIATAVTALCGYAVLYLAARDLEPEGFSVFGVFWGAFGLASGAAFGLLQEATREVRDARVE HAGDGPHTHPVRIGAVVGVVAAVLIVVTAPLWAGRVFVEARWLSVLLLSAGLAGFCVHATLLGMLAGVNRWTQYGALMVT DAVIRVLVAVATFAVGWGLGGFLWATVGGAIAWLLLLICSPATRAAARLRTPGSTATFLRGAAHSIAAAGASAVLVMGFP VLLKATSDDLGAAGGVVILAVTLTRAPLLVPLTAMQGNLIAHFVDQRSARLRALVAPSALVLGLGTLGVIAAGLLGPWLL RAGFGEQYQADGALLAWLTTAAVAIALLTLTGAATVAAAMHRTYALGWVGATVAAVLLLLLPLDLETRTVVALLCGPLVG IAVHLAGLAGAPDRTHILRSRRRRAP >Mature_425_residues TDAAPSTGPVTRSSVARVGIATAVTALCGYAVLYLAARDLEPEGFSVFGVFWGAFGLASGAAFGLLQEATREVRDARVEH AGDGPHTHPVRIGAVVGVVAAVLIVVTAPLWAGRVFVEARWLSVLLLSAGLAGFCVHATLLGMLAGVNRWTQYGALMVTD AVIRVLVAVATFAVGWGLGGFLWATVGGAIAWLLLLICSPATRAAARLRTPGSTATFLRGAAHSIAAAGASAVLVMGFPV LLKATSDDLGAAGGVVILAVTLTRAPLLVPLTAMQGNLIAHFVDQRSARLRALVAPSALVLGLGTLGVIAAGLLGPWLLR AGFGEQYQADGALLAWLTTAAVAIALLTLTGAATVAAAMHRTYALGWVGATVAAVLLLLLPLDLETRTVVALLCGPLVGI AVHLAGLAGAPDRTHILRSRRRRAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1510 and M.bovis Mb3654 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43511; Mature: 43380
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAAPSTGPVTRSSVARVGIATAVTALCGYAVLYLAARDLEPEGFSVFGVFWGAFGLAS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH GAAFGLLQEATREVRDARVEHAGDGPHTHPVRIGAVVGVVAAVLIVVTAPLWAGRVFVEA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH RWLSVLLLSAGLAGFCVHATLLGMLAGVNRWTQYGALMVTDAVIRVLVAVATFAVGWGLG HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH GFLWATVGGAIAWLLLLICSPATRAAARLRTPGSTATFLRGAAHSIAAAGASAVLVMGFP HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCH VLLKATSDDLGAAGGVVILAVTLTRAPLLVPLTAMQGNLIAHFVDQRSARLRALVAPSAL HHEEECCCCCCCCCCHHEEEHHHHCCCHHEEHHHHCCCHHHHHHHHHHHHHHHHHCCHHH VLGLGTLGVIAAGLLGPWLLRAGFGEQYQADGALLAWLTTAAVAIALLTLTGAATVAAAM HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRTYALGWVGATVAAVLLLLLPLDLETRTVVALLCGPLVGIAVHLAGLAGAPDRTHILRS HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH RRRRAP HHCCCC >Mature Secondary Structure TDAAPSTGPVTRSSVARVGIATAVTALCGYAVLYLAARDLEPEGFSVFGVFWGAFGLAS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH GAAFGLLQEATREVRDARVEHAGDGPHTHPVRIGAVVGVVAAVLIVVTAPLWAGRVFVEA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH RWLSVLLLSAGLAGFCVHATLLGMLAGVNRWTQYGALMVTDAVIRVLVAVATFAVGWGLG HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH GFLWATVGGAIAWLLLLICSPATRAAARLRTPGSTATFLRGAAHSIAAAGASAVLVMGFP HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCH VLLKATSDDLGAAGGVVILAVTLTRAPLLVPLTAMQGNLIAHFVDQRSARLRALVAPSAL HHEEECCCCCCCCCCHHEEEHHHHCCCHHEEHHHHCCCHHHHHHHHHHHHHHHHHCCHHH VLGLGTLGVIAAGLLGPWLLRAGFGEQYQADGALLAWLTTAAVAIALLTLTGAATVAAAM HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRTYALGWVGATVAAVLLLLLPLDLETRTVVALLCGPLVGIAVHLAGLAGAPDRTHILRS HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH RRRRAP HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]