| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870705
Identifier: 119870705
GI number: 119870705
Start: 4902604
End: 4903020
Strand: Direct
Name: 119870705
Synonym: Mkms_4676
Alternate gene names: NA
Gene position: 4902604-4903020 (Clockwise)
Preceding gene: 119870704
Following gene: 119870708
Centisome position: 85.45
GC content: 64.51
Gene sequence:
>417_bases ATGCTCGGGGCCATGGCGACCGTCTTCACCAAGATCATCAACGGAGAACTCCCGGGCCGATTCGTCTACGAGGACGACGA GATCGTCGCGTTCCTCACCATCGCGCCGATGACGCAGGGCCACACGCTCGTCGTGCCGCGCGCGGAGATCGACCAGTGGC AGGACATCGAACCCGCGGTGTTCGCCCGCGTCATGGAGGTGTCGCAGCTGATCGGCAAGGCGGTTGTCAAGGCGTTCGGT GCCGAACGCGCGGGCGTCATCATCGCCGGCCTCGAAGTCCCGCACCTTCACGTGCACGTCTTCCCCGCCTACAACCTCAC CGACTTCGGATTCGCGAACGTCGACAACAACCCGTCGCCGGAATCGCTCGACGAGGCCCAGTCCAAGATCAAGGCCGCAC TCGCCGAACTCGGTTGA
Upstream 100 bases:
>100_bases CGGGGGCTGAGCGTCGCCGAACGTGAAGCCACTGCGAAAAATCGGGCCGTTCGTCGCACTCAGTTCACGTTCGACGGATG GAGCCCGGCGGAGCGTCACT
Downstream 100 bases:
>100_bases GCATCAAGCCGTTTCGACGGGAACGTCGCTGAACCGCGGTAGGTGCACGGTGAACCGGCAGCCCTGCCCCGGCGCCGTCG TCACGCGCACCGTCCCGCCG
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MLGAMATVFTKIINGELPGRFVYEDDEIVAFLTIAPMTQGHTLVVPRAEIDQWQDIEPAVFARVMEVSQLIGKAVVKAFG AERAGVIIAGLEVPHLHVHVFPAYNLTDFGFANVDNNPSPESLDEAQSKIKAALAELG
Sequences:
>Translated_138_residues MLGAMATVFTKIINGELPGRFVYEDDEIVAFLTIAPMTQGHTLVVPRAEIDQWQDIEPAVFARVMEVSQLIGKAVVKAFG AERAGVIIAGLEVPHLHVHVFPAYNLTDFGFANVDNNPSPESLDEAQSKIKAALAELG >Mature_138_residues MLGAMATVFTKIINGELPGRFVYEDDEIVAFLTIAPMTQGHTLVVPRAEIDQWQDIEPAVFARVMEVSQLIGKAVVKAFG AERAGVIIAGLEVPHLHVHVFPAYNLTDFGFANVDNNPSPESLDEAQSKIKAALAELG
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 14929; Mature: 14929
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGAMATVFTKIINGELPGRFVYEDDEIVAFLTIAPMTQGHTLVVPRAEIDQWQDIEPAV CCCHHHHHHHHHHCCCCCCCEEEECCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCHHH FARVMEVSQLIGKAVVKAFGAERAGVIIAGLEVPHLHVHVFPAYNLTDFGFANVDNNPSP HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCC ESLDEAQSKIKAALAELG CHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLGAMATVFTKIINGELPGRFVYEDDEIVAFLTIAPMTQGHTLVVPRAEIDQWQDIEPAV CCCHHHHHHHHHHCCCCCCCEEEECCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCHHH FARVMEVSQLIGKAVVKAFGAERAGVIIAGLEVPHLHVHVFPAYNLTDFGFANVDNNPSP HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCC ESLDEAQSKIKAALAELG CHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]