| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870659
Identifier: 119870659
GI number: 119870659
Start: 4854054
End: 4855253
Strand: Direct
Name: 119870659
Synonym: Mkms_4630
Alternate gene names: NA
Gene position: 4854054-4855253 (Clockwise)
Preceding gene: 119870656
Following gene: 119870665
Centisome position: 84.61
GC content: 69.67
Gene sequence:
>1200_bases GTGGCCAGCCACCGCCGTCACCCGCCGTACCGGCTGGCCGGCGCGGTTGCGCTCGCGGTGTTCTGCGTTGTGGCGGCAAC CATTTCGCTACAGTTCCGCGGCGCCTTCGCCGAGCGGGTGACACTCACCCTGTTGTCCCCCCGGGCCGGGCTGGTGGTGG ACCCGGGAGCGAAGGTGACGTTCAACGGGGTGGAGATCGGACGGGTGACCGCGATCTCCGCCCGAGCCGACGAGACCGCA CCGGCAGAGTTGGCCCTGTCGGTCGACCCGCGCCATCTGCACGTCATCCCGGCCAATGTGATCGCCGACATCAGGGCCAG CACAGTCTTCGGCAACAAGTACGTTGCGCTCCGGTCACCGGATCACCCTGCGCGCGAACCGATCTCACCGGACCTCCCGA TCCGGTCGGTGGCGGTCACCACCGAGTTCAACACGTTGTTCGAGACGGTCGTGAGCCTGGCCGAGCGGGTGGACCCGGTC AAGCTCAACCAGACCCTCGCCGCCACCGCCGAGGCACTCACCGGGCTGGGTGCACGCTTCGGCGAATCGCTGGAACACGG AGCCGCGATCCTGGCGGACCTCAATCCGCGGATGGATCAGGTGCGCCACGACGTGGCGCGCACCGCCGATCTGGCAGGCA TCTACGCCGACGCCTCCCCCGACCTGTGGTCGGCGCTGGACCACGCCGCGCTCACCGCGGCGACGGTGAACGCCCGTCGT TCCGACGTCGACGCCGCGCTGCTGGCGGCGGCCGGTTTCGAGGCGGGCGCCGACACGCTGCGGCGCGCCGGGCCGTACCT GGTGCGCGGTAGTGCCGACCTGCAGCCCACCACCGCACTGCTCGACGACTACCGGGGCATGATCTTCTGCACGATCCGCA ACTACCACGACGTCGCACCGGAGATCCAGCGCACGCTCGGCGGAGACAACGGCTACGCGCTGCGCGCGGCGGGCACCGTG CTCGGCGCCGGCAATCCCTATGTGTATCCCGACAATCTGCCGCGAATCAACGCCCGCGGCGGACCCGGCGGCAGGCCGGG CTGCTGGCAGAAGGTCACCCGCGAGCTGTGGCCGCATCCGTATCTGGTGATGGACACCGGCTACAGCCTGGCCCCGTACA ACCACGCCGAGTTCGGCCAACCGTTCGCGATGGACTACGTGTGGGGCCGCCAACTCGGCGAGCTCACCATCAATCCCTGA
Upstream 100 bases:
>100_bases GGCCGTGTCGTCGCGCAGCCAGTCCACGACGGCCGATACCGCCGCGCGGGTCTGCGCCGGATCGGCGGTGCGGCGGGCGG CCATACCTTAGTGTCGCAAA
Downstream 100 bases:
>100_bases CCGCCGAGCGCAGGGGCCGCTGGACGGCCAGCGCCGCGAGCGCACCGGCCTCGTTGACCGCCAGATGCGCCAGCATCGGC GCGACCAGACTGCCGGACCG
Product: virulence factor Mce family protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family A; Virulence Factor; MCE-Family Protein; Mce Family A; MCE Family Protein; Mce-Related Protein; Cell Invasion Protein; MCE-Family; Virulence Factor MCE-Like Protein
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MASHRRHPPYRLAGAVALAVFCVVAATISLQFRGAFAERVTLTLLSPRAGLVVDPGAKVTFNGVEIGRVTAISARADETA PAELALSVDPRHLHVIPANVIADIRASTVFGNKYVALRSPDHPAREPISPDLPIRSVAVTTEFNTLFETVVSLAERVDPV KLNQTLAATAEALTGLGARFGESLEHGAAILADLNPRMDQVRHDVARTADLAGIYADASPDLWSALDHAALTAATVNARR SDVDAALLAAAGFEAGADTLRRAGPYLVRGSADLQPTTALLDDYRGMIFCTIRNYHDVAPEIQRTLGGDNGYALRAAGTV LGAGNPYVYPDNLPRINARGGPGGRPGCWQKVTRELWPHPYLVMDTGYSLAPYNHAEFGQPFAMDYVWGRQLGELTINP
Sequences:
>Translated_399_residues MASHRRHPPYRLAGAVALAVFCVVAATISLQFRGAFAERVTLTLLSPRAGLVVDPGAKVTFNGVEIGRVTAISARADETA PAELALSVDPRHLHVIPANVIADIRASTVFGNKYVALRSPDHPAREPISPDLPIRSVAVTTEFNTLFETVVSLAERVDPV KLNQTLAATAEALTGLGARFGESLEHGAAILADLNPRMDQVRHDVARTADLAGIYADASPDLWSALDHAALTAATVNARR SDVDAALLAAAGFEAGADTLRRAGPYLVRGSADLQPTTALLDDYRGMIFCTIRNYHDVAPEIQRTLGGDNGYALRAAGTV LGAGNPYVYPDNLPRINARGGPGGRPGCWQKVTRELWPHPYLVMDTGYSLAPYNHAEFGQPFAMDYVWGRQLGELTINP >Mature_398_residues ASHRRHPPYRLAGAVALAVFCVVAATISLQFRGAFAERVTLTLLSPRAGLVVDPGAKVTFNGVEIGRVTAISARADETAP AELALSVDPRHLHVIPANVIADIRASTVFGNKYVALRSPDHPAREPISPDLPIRSVAVTTEFNTLFETVVSLAERVDPVK LNQTLAATAEALTGLGARFGESLEHGAAILADLNPRMDQVRHDVARTADLAGIYADASPDLWSALDHAALTAATVNARRS DVDAALLAAAGFEAGADTLRRAGPYLVRGSADLQPTTALLDDYRGMIFCTIRNYHDVAPEIQRTLGGDNGYALRAAGTVL GAGNPYVYPDNLPRINARGGPGGRPGCWQKVTRELWPHPYLVMDTGYSLAPYNHAEFGQPFAMDYVWGRQLGELTINP
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42684; Mature: 42553
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASHRRHPPYRLAGAVALAVFCVVAATISLQFRGAFAERVTLTLLSPRAGLVVDPGAKVT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCCEEECCCCEEE FNGVEIGRVTAISARADETAPAELALSVDPRHLHVIPANVIADIRASTVFGNKYVALRSP ECCEEECEEEEEECCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHEEECCEEEEEECC DHPAREPISPDLPIRSVAVTTEFNTLFETVVSLAERVDPVKLNQTLAATAEALTGLGARF CCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH GESLEHGAAILADLNPRMDQVRHDVARTADLAGIYADASPDLWSALDHAALTAATVNARR HHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCC SDVDAALLAAAGFEAGADTLRRAGPYLVRGSADLQPTTALLDDYRGMIFCTIRNYHDVAP CCHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHCCCCEEEEEECCCHHCCH EIQRTLGGDNGYALRAAGTVLGAGNPYVYPDNLPRINARGGPGGRPGCWQKVTRELWPHP HHHHHHCCCCCEEEEECCEEEECCCCEECCCCCCEEECCCCCCCCCHHHHHHHHHHCCCC YLVMDTGYSLAPYNHAEFGQPFAMDYVWGRQLGELTINP EEEEECCCCCCCCCCCCCCCCEEEHHHHHCCCCCEEECC >Mature Secondary Structure ASHRRHPPYRLAGAVALAVFCVVAATISLQFRGAFAERVTLTLLSPRAGLVVDPGAKVT CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCCEEECCCCEEE FNGVEIGRVTAISARADETAPAELALSVDPRHLHVIPANVIADIRASTVFGNKYVALRSP ECCEEECEEEEEECCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHEEECCEEEEEECC DHPAREPISPDLPIRSVAVTTEFNTLFETVVSLAERVDPVKLNQTLAATAEALTGLGARF CCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH GESLEHGAAILADLNPRMDQVRHDVARTADLAGIYADASPDLWSALDHAALTAATVNARR HHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCC SDVDAALLAAAGFEAGADTLRRAGPYLVRGSADLQPTTALLDDYRGMIFCTIRNYHDVAP CCHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHCCCCEEEEEECCCHHCCH EIQRTLGGDNGYALRAAGTVLGAGNPYVYPDNLPRINARGGPGGRPGCWQKVTRELWPHP HHHHHHCCCCCEEEEECCEEEECCCCEECCCCCCEEECCCCCCCCCHHHHHHHHHHCCCC YLVMDTGYSLAPYNHAEFGQPFAMDYVWGRQLGELTINP EEEEECCCCCCCCCCCCCCCCEEEHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA