| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870612
Identifier: 119870612
GI number: 119870612
Start: 4814779
End: 4815378
Strand: Direct
Name: 119870612
Synonym: Mkms_4583
Alternate gene names: NA
Gene position: 4814779-4815378 (Clockwise)
Preceding gene: 119870606
Following gene: 119870613
Centisome position: 83.92
GC content: 71.33
Gene sequence:
>600_bases GTGACCACCGCTCGCCCGCTGCGCGCCGACGCGGCCCGCAACCGCGAGCTGCTTCTCGCGGCGGCCGAGGAGGAATTCGC CGAGCGCGGCCTGGACGCCTCGGTCGCCGACATCGCCCGGCGTGCCGGCATCGCGAAGGGCACGGTGTTCCGCCACTTCG CCACGAAGGAAGACCTGATCGCGTCCATCGTCAGCGCGCACATCGCGGCACTCGCCGCGGCGGCCCGCGGTCTGGCCGAC GCGGCCGACCCGGGTGCGGCGCTCCTGGAGTTCCTCACCGTCGCCGCCGACCAGCGTCAACAGCGCGACCTGACGTTCCT GCAGTCGGCCAGTGACGACGATCCGCGGGTCATCGAGGTCCGTGACGAGCTGCACGCCGCGCTCGAAACGCTGGTCGGAC GGGCTCGCGACGCCGGCGCCATCCGCTCGGACATCACCGAGACCGACGTGTTCCTGTTGATGTGCGCACCTATCCACGTC GTCGAGAACCTCGCTGCGCCAACCCCGTTGCTGTGGCAGCGCTACCTCGCGATCATCTTCGACGGGTTGCGACCCGAGGG CGCCCATCCCCTGCCGCAACCGGCGCCGAACCTGCCCTAG
Upstream 100 bases:
>100_bases CCAATCGTTTTCACGCCTCAAAGAAAATGACCCTGTGGTCACCTTGCTCTTCGAAGGTTGCCACAAGATGACCGACCGGT CAACTTGGTAGCCTCGGGTC
Downstream 100 bases:
>100_bases GCTCGGACCATGACGGTGTCCAGACTGCGGCCGTACGCGGTGACGGTGTTCGCCGAGATGTCGGCGCTCGCCGCGCGGAT CGGCGCGGTGAACCTCGGAC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: TetR-Type Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator; Tetr Family Transcriptional Regulator
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTTARPLRADAARNRELLLAAAEEEFAERGLDASVADIARRAGIAKGTVFRHFATKEDLIASIVSAHIAALAAAARGLAD AADPGAALLEFLTVAADQRQQRDLTFLQSASDDDPRVIEVRDELHAALETLVGRARDAGAIRSDITETDVFLLMCAPIHV VENLAAPTPLLWQRYLAIIFDGLRPEGAHPLPQPAPNLP
Sequences:
>Translated_199_residues MTTARPLRADAARNRELLLAAAEEEFAERGLDASVADIARRAGIAKGTVFRHFATKEDLIASIVSAHIAALAAAARGLAD AADPGAALLEFLTVAADQRQQRDLTFLQSASDDDPRVIEVRDELHAALETLVGRARDAGAIRSDITETDVFLLMCAPIHV VENLAAPTPLLWQRYLAIIFDGLRPEGAHPLPQPAPNLP >Mature_198_residues TTARPLRADAARNRELLLAAAEEEFAERGLDASVADIARRAGIAKGTVFRHFATKEDLIASIVSAHIAALAAAARGLADA ADPGAALLEFLTVAADQRQQRDLTFLQSASDDDPRVIEVRDELHAALETLVGRARDAGAIRSDITETDVFLLMCAPIHVV ENLAAPTPLLWQRYLAIIFDGLRPEGAHPLPQPAPNLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21339; Mature: 21208
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTARPLRADAARNRELLLAAAEEEFAERGLDASVADIARRAGIAKGTVFRHFATKEDLI CCCCCCCHHHHHCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH ASIVSAHIAALAAAARGLADAADPGAALLEFLTVAADQRQQRDLTFLQSASDDDPRVIEV HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHH RDELHAALETLVGRARDAGAIRSDITETDVFLLMCAPIHVVENLAAPTPLLWQRYLAIIF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH DGLRPEGAHPLPQPAPNLP HCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTARPLRADAARNRELLLAAAEEEFAERGLDASVADIARRAGIAKGTVFRHFATKEDLI CCCCCCHHHHHCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH ASIVSAHIAALAAAARGLADAADPGAALLEFLTVAADQRQQRDLTFLQSASDDDPRVIEV HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHH RDELHAALETLVGRARDAGAIRSDITETDVFLLMCAPIHVVENLAAPTPLLWQRYLAIIF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH DGLRPEGAHPLPQPAPNLP HCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA