Definition Mycobacterium sp. KMS chromosome, complete genome.
Accession NC_008705
Length 5,737,227

Click here to switch to the map view.

The map label for this gene is 119870425

Identifier: 119870425

GI number: 119870425

Start: 4618368

End: 4618961

Strand: Direct

Name: 119870425

Synonym: Mkms_4396

Alternate gene names: NA

Gene position: 4618368-4618961 (Clockwise)

Preceding gene: 119870424

Following gene: 119870432

Centisome position: 80.5

GC content: 68.86

Gene sequence:

>594_bases
ATGAGCACACCTGCAACGCCGCGGAACGGTTCGAAGCGCGCTGCCGATACCGATCGGATTCAGGTCGCGCAGTTGCTCAC
TGATGCCGCGGCGCAGGGTCGCCTCCAGATGACCGAGTACGAAGATCGGTTGACCAAGGCGTACGCCGCCCAGACCTATG
ACGAACTCGCCTCGTTGAGCGCCGACCTCCCGGGCGCGATGACCACACCGCGCGGCACCGGACCGTGCCGGCCCGCACCG
TCGACGATGTTGCTGGCGATCATGAGCGGGTTCGAACGCCGTGGCCGGTGGAATGTGCCGCGGCGGCTCACCACCATGGC
TCTCTTCGGTGGCGGTGTCGTCGACCTGCGCTACGCGGACTTCACCGCCCCCGAGGTCGAGATCCGGGCGTATTCGGTGT
TCGGCGGTCAGACGATCCTGGTGCCGCCGGAGGTCAACGTCGACCTGCGCGGTGTCGCGGTGATGGGCGCGTTCGACCAC
AGCGTGCCGGGTCAGGGCAGCCCGGGCGCGCCGTGCGTGCGGATCGGCGGCTTCGCGCTGTGGGGCAGCGTCGCCGTCAA
GCGCAAGAAGCGCAAGCAGGCCGCCGCCGGTTAA

Upstream 100 bases:

>100_bases
CCGGAAACTTCGAACAACTACAGGGTTCGCCGTCGCGGGCGAGGGCACAGTTTAGCCAACACTCTTGCATGTGCCAGCGT
TCGTCGTAGGCTCGTCTCTG

Downstream 100 bases:

>100_bases
TCGGTTTCGTCGCCGCCGGCCGCGTCGTCGGTCTTGTCGGTATTCGCCCCGATCGACGCGCCGCCGGTCACCTTCTTGAC
CACATCGTTGATCCGCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSTPATPRNGSKRAADTDRIQVAQLLTDAAAQGRLQMTEYEDRLTKAYAAQTYDELASLSADLPGAMTTPRGTGPCRPAP
STMLLAIMSGFERRGRWNVPRRLTTMALFGGGVVDLRYADFTAPEVEIRAYSVFGGQTILVPPEVNVDLRGVAVMGAFDH
SVPGQGSPGAPCVRIGGFALWGSVAVKRKKRKQAAAG

Sequences:

>Translated_197_residues
MSTPATPRNGSKRAADTDRIQVAQLLTDAAAQGRLQMTEYEDRLTKAYAAQTYDELASLSADLPGAMTTPRGTGPCRPAP
STMLLAIMSGFERRGRWNVPRRLTTMALFGGGVVDLRYADFTAPEVEIRAYSVFGGQTILVPPEVNVDLRGVAVMGAFDH
SVPGQGSPGAPCVRIGGFALWGSVAVKRKKRKQAAAG
>Mature_196_residues
STPATPRNGSKRAADTDRIQVAQLLTDAAAQGRLQMTEYEDRLTKAYAAQTYDELASLSADLPGAMTTPRGTGPCRPAPS
TMLLAIMSGFERRGRWNVPRRLTTMALFGGGVVDLRYADFTAPEVEIRAYSVFGGQTILVPPEVNVDLRGVAVMGAFDHS
VPGQGSPGAPCVRIGGFALWGSVAVKRKKRKQAAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012551 [H]

Pfam domain/function: PF08044 DUF1707 [H]

EC number: NA

Molecular weight: Translated: 20968; Mature: 20837

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPATPRNGSKRAADTDRIQVAQLLTDAAAQGRLQMTEYEDRLTKAYAAQTYDELASLS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHC
ADLPGAMTTPRGTGPCRPAPSTMLLAIMSGFERRGRWNVPRRLTTMALFGGGVVDLRYAD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECC
FTAPEVEIRAYSVFGGQTILVPPEVNVDLRGVAVMGAFDHSVPGQGSPGAPCVRIGGFAL
CCCCCEEEEEEEEECCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCHH
WGSVAVKRKKRKQAAAG
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STPATPRNGSKRAADTDRIQVAQLLTDAAAQGRLQMTEYEDRLTKAYAAQTYDELASLS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHC
ADLPGAMTTPRGTGPCRPAPSTMLLAIMSGFERRGRWNVPRRLTTMALFGGGVVDLRYAD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECC
FTAPEVEIRAYSVFGGQTILVPPEVNVDLRGVAVMGAFDHSVPGQGSPGAPCVRIGGFAL
CCCCCEEEEEEEEECCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCHH
WGSVAVKRKKRKQAAAG
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]