| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870314
Identifier: 119870314
GI number: 119870314
Start: 4506166
End: 4507035
Strand: Direct
Name: 119870314
Synonym: Mkms_4284
Alternate gene names: NA
Gene position: 4506166-4507035 (Clockwise)
Preceding gene: 119870308
Following gene: 119870319
Centisome position: 78.54
GC content: 68.62
Gene sequence:
>870_bases ATGGCCTCTGAACGACTCGGTGAGTTCCTGCGGGCGCGTCGTGCCCAGGTGAATCCGGAGGACGTCGGGTTGCAGCATTA CGGTGAGCGCCGACGGGTGGCCGGACTGCGTCGCGAGGAACTCGCGCAGTTGGCGGGTGTGAGCGTGTCGTACTACACGC GCTTGGAGCAGGGGCAGTCCGTGAACGCCTCGGCAGCGATCCTGGATTCGCTGGCCCGCGCCCTGCAGTTGAACGAATAT GAGCGACAACATCTTCGAGACCTCGCCACCCGCCGGACCGAGCCGGTCCGGCGGCCGCCGGCCGAACGGGTCAGCACGCT CACCCGCGACCTGTTGCGTTCCCTCGGCGATCTTCCCGCGGTCGTGGTCGGCCGGCGCACCGATGTCCTGGCCTGGAACG ACGTCGGTCACGCGCTGGTGGCCGGCCACATCGACCGCGAGGCGGTGGAACGGGCCACCGAGCGCCCTAACCTGGCCCGG ATGATGTTCCTCGACCCGCACACCCGCGAGCTGTACCTGGACTGGCCGCGCAAGGCGCGGGCGGTGGTGGGGAACCTGCG TCATGTCGCGGGCCGCCATCCCGAGGATGCCCTGCTGTCCGCGCCGATCGGTGAACTGACGGTCAAAAGCCCGGAGTTCG TGGCGCTGTGGGCAGACCACCGGGTCAAACGCTGTGAGGCAGATACCTACGACCTGCATCACCCCCTGGTCGGCCCGCTC ACCGTCACCCAGCAGAACCTCACACTGGCCCGCTCCCCCGAGCAGGCGTTGTCCGTCATGACCACCGCGGAAGGATCCGC GTCGGCCGACACCATGCAACTGCTGATCCGTTCGGTCCGCGGCGATCACCCGGCGCCGCAACGGGTCTGA
Upstream 100 bases:
>100_bases TGCGCCCAGCGTGGGTCGCCGGTGGCGGGCGGACCAGCCCCGCGCTTGCCTACCCCTGTCAGGGTCAGGCAGCCCGGCCG CGTGTGACGCATAGTGGGGT
Downstream 100 bases:
>100_bases CCTCGTTTGCGGTCAGCGTGCGGAATCTACCCGCGTCAGCAGCAGGGCCGCCTCGTTGTAAGGGAACGCCCGGTAGAACA GCCGGGAACGGGGGGCGACG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Helix-Turn-Helix Protein; Helix-Turn-Helix Domain Containing Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MASERLGEFLRARRAQVNPEDVGLQHYGERRRVAGLRREELAQLAGVSVSYYTRLEQGQSVNASAAILDSLARALQLNEY ERQHLRDLATRRTEPVRRPPAERVSTLTRDLLRSLGDLPAVVVGRRTDVLAWNDVGHALVAGHIDREAVERATERPNLAR MMFLDPHTRELYLDWPRKARAVVGNLRHVAGRHPEDALLSAPIGELTVKSPEFVALWADHRVKRCEADTYDLHHPLVGPL TVTQQNLTLARSPEQALSVMTTAEGSASADTMQLLIRSVRGDHPAPQRV
Sequences:
>Translated_289_residues MASERLGEFLRARRAQVNPEDVGLQHYGERRRVAGLRREELAQLAGVSVSYYTRLEQGQSVNASAAILDSLARALQLNEY ERQHLRDLATRRTEPVRRPPAERVSTLTRDLLRSLGDLPAVVVGRRTDVLAWNDVGHALVAGHIDREAVERATERPNLAR MMFLDPHTRELYLDWPRKARAVVGNLRHVAGRHPEDALLSAPIGELTVKSPEFVALWADHRVKRCEADTYDLHHPLVGPL TVTQQNLTLARSPEQALSVMTTAEGSASADTMQLLIRSVRGDHPAPQRV >Mature_288_residues ASERLGEFLRARRAQVNPEDVGLQHYGERRRVAGLRREELAQLAGVSVSYYTRLEQGQSVNASAAILDSLARALQLNEYE RQHLRDLATRRTEPVRRPPAERVSTLTRDLLRSLGDLPAVVVGRRTDVLAWNDVGHALVAGHIDREAVERATERPNLARM MFLDPHTRELYLDWPRKARAVVGNLRHVAGRHPEDALLSAPIGELTVKSPEFVALWADHRVKRCEADTYDLHHPLVGPLT VTQQNLTLARSPEQALSVMTTAEGSASADTMQLLIRSVRGDHPAPQRV
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32342; Mature: 32211
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASERLGEFLRARRAQVNPEDVGLQHYGERRRVAGLRREELAQLAGVSVSYYTRLEQGQS CCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCC VNASAAILDSLARALQLNEYERQHLRDLATRRTEPVRRPPAERVSTLTRDLLRSLGDLPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCE VVVGRRTDVLAWNDVGHALVAGHIDREAVERATERPNLARMMFLDPHTRELYLDWPRKAR EEECCCCCEEEECCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCEEEECCCHHHH AVVGNLRHVAGRHPEDALLSAPIGELTVKSPEFVALWADHRVKRCEADTYDLHHPLVGPL HHHHHHHHHHCCCCCHHHHHCCCCCEEECCCCEEEEECHHHHHHCCCCCCCCCCCCCCCE TVTQQNLTLARSPEQALSVMTTAEGSASADTMQLLIRSVRGDHPAPQRV EEECCCCEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ASERLGEFLRARRAQVNPEDVGLQHYGERRRVAGLRREELAQLAGVSVSYYTRLEQGQS CHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCC VNASAAILDSLARALQLNEYERQHLRDLATRRTEPVRRPPAERVSTLTRDLLRSLGDLPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCE VVVGRRTDVLAWNDVGHALVAGHIDREAVERATERPNLARMMFLDPHTRELYLDWPRKAR EEECCCCCEEEECCCCHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCEEEECCCHHHH AVVGNLRHVAGRHPEDALLSAPIGELTVKSPEFVALWADHRVKRCEADTYDLHHPLVGPL HHHHHHHHHHCCCCCHHHHHCCCCCEEECCCCEEEEECHHHHHHCCCCCCCCCCCCCCCE TVTQQNLTLARSPEQALSVMTTAEGSASADTMQLLIRSVRGDHPAPQRV EEECCCCEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA