Definition Mycobacterium sp. KMS chromosome, complete genome.
Accession NC_008705
Length 5,737,227

Click here to switch to the map view.

The map label for this gene is 119870299

Identifier: 119870299

GI number: 119870299

Start: 4493678

End: 4494283

Strand: Direct

Name: 119870299

Synonym: Mkms_4269

Alternate gene names: NA

Gene position: 4493678-4494283 (Clockwise)

Preceding gene: 119870294

Following gene: 119870300

Centisome position: 78.32

GC content: 69.97

Gene sequence:

>606_bases
ATGGCTTTCATGTCGGCGCCCGCCCCCGCCCGGGACCGTCGCGTCCGTCGGTCGCGCGCCGCGCTGATCCAGGCGGCGAT
CGACGTGGTCACCGGACGCGACACCGCCTCGGTCGCGCTCAGCGATATCGCCGAGGCCGCCGGCGTCACCCGCAAGGTGG
CCTATCAGCAGTTCGGCGACCGCGATGCGCTGCTGATGGAAGCGGCGCTGGATCTGATGCGCCGGGAAGTGGTGCCGCAG
GTGATCAACCTGCCGCCGGGCAAGCCACGTGCCCTGGCTGCGCTCCGCCACTTCGCCGACCACCGTCGCTTCTACCGGGC
GGTGCTGACCGGCCCGAACGCGGTGAGCCTGGGCGCCGGGCTGGCGGATCTGGTGCTACCGCGCACCCGGGACCGCATCC
GCGACCTCCACGGCGACGACCTCGACCCCCAGTTGGTGGCCGATCTGGCCGTTCAGATCAACGGCGGCATCCTCGCGATG
ATCACCGCGTGGTTGATCGAGGGCGATGACCCGTTGGACCCCGACGACTTCGCCGAACGGATGTTGCGGGTGCAGTACTT
CTTGATTCCCGAGGGCAGGCGTGATGCCGACGAGGGGCGTCGTTGA

Upstream 100 bases:

>100_bases
GGTACCGCGTCCGCACCGCACAAGGCCCGCGGACCGGCACTATGGAACAACCGTATCTTATGGAACACTTGTTCCCTAAC
GCACAGGATATAACTGTGAG

Downstream 100 bases:

>100_bases
CGAGACTGTCGACGCGACCGAGCAGTTGATTGCCCTGCCGAGTATGGAATCCGCTCGCGGCGTCTGCGCATTGGGGCCGG
GCATCGAGAAGTCCCAGGTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein TetR

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAFMSAPAPARDRRVRRSRAALIQAAIDVVTGRDTASVALSDIAEAAGVTRKVAYQQFGDRDALLMEAALDLMRREVVPQ
VINLPPGKPRALAALRHFADHRRFYRAVLTGPNAVSLGAGLADLVLPRTRDRIRDLHGDDLDPQLVADLAVQINGGILAM
ITAWLIEGDDPLDPDDFAERMLRVQYFLIPEGRRDADEGRR

Sequences:

>Translated_201_residues
MAFMSAPAPARDRRVRRSRAALIQAAIDVVTGRDTASVALSDIAEAAGVTRKVAYQQFGDRDALLMEAALDLMRREVVPQ
VINLPPGKPRALAALRHFADHRRFYRAVLTGPNAVSLGAGLADLVLPRTRDRIRDLHGDDLDPQLVADLAVQINGGILAM
ITAWLIEGDDPLDPDDFAERMLRVQYFLIPEGRRDADEGRR
>Mature_200_residues
AFMSAPAPARDRRVRRSRAALIQAAIDVVTGRDTASVALSDIAEAAGVTRKVAYQQFGDRDALLMEAALDLMRREVVPQV
INLPPGKPRALAALRHFADHRRFYRAVLTGPNAVSLGAGLADLVLPRTRDRIRDLHGDDLDPQLVADLAVQINGGILAMI
TAWLIEGDDPLDPDDFAERMLRVQYFLIPEGRRDADEGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22142; Mature: 22011

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFMSAPAPARDRRVRRSRAALIQAAIDVVTGRDTASVALSDIAEAAGVTRKVAYQQFGD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
RDALLMEAALDLMRREVVPQVINLPPGKPRALAALRHFADHRRFYRAVLTGPNAVSLGAG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
LADLVLPRTRDRIRDLHGDDLDPQLVADLAVQINGGILAMITAWLIEGDDPLDPDDFAER
HHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHH
MLRVQYFLIPEGRRDADEGRR
HHHHHHEECCCCCCCCCCCCC
>Mature Secondary Structure 
AFMSAPAPARDRRVRRSRAALIQAAIDVVTGRDTASVALSDIAEAAGVTRKVAYQQFGD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
RDALLMEAALDLMRREVVPQVINLPPGKPRALAALRHFADHRRFYRAVLTGPNAVSLGAG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
LADLVLPRTRDRIRDLHGDDLDPQLVADLAVQINGGILAMITAWLIEGDDPLDPDDFAER
HHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHH
MLRVQYFLIPEGRRDADEGRR
HHHHHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA