| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is ectD [H]
Identifier: 119870289
GI number: 119870289
Start: 4485167
End: 4486066
Strand: Direct
Name: ectD [H]
Synonym: Mkms_4259
Alternate gene names: 119870289
Gene position: 4485167-4486066 (Clockwise)
Preceding gene: 119870288
Following gene: 119870290
Centisome position: 78.18
GC content: 67.0
Gene sequence:
>900_bases ATGGCGGTCGACACGACGCACCGGGTGCGCGACCACTACCCCACCAGACTCGACCAGCCTGCTGAGCCCATCACGCGCGC CGAACCGACCGTGTGGGGTCGAGAGCCCGACGGTCCGCTCACCGGAGCTGACCTACGGACGATGGCCGGTGCCGGCTACC TCGTGCGGCCCGACACGCTGGACCCCATCTGGTTAGCGCCACTGCAGGATGAGCTGGCCCGGATCAGCACCGTGGCCGAC GCGGGTGACCCGCGCATCATCCGGGAGCGCACCGGAGGCATCCGGTCGGTGTTCCAGCCGCATCTGTTCAGCGAGGTCAT CGCCGAGGTCATCTCGCTCGACACCGTCCTCCCCGTGGCGCGCCAGATCCTGGGCAGCGACGTCTACATCCATCAGGCGC GAATCAACGTGATGCCGGGGTTCACCGGTGGCGGCTTCTATTGGCACTCGGATTTCGAGACGTGGCATGCGGAGGACGGC ATGCCGGCGATGCGCGCGGTCTCGTGTTCCATCGCGCTGACCGAGAACTTCCCGCACAACGGGTCGCTCATGGTCATGCC GGGTTCACATGAGGTGTTCTACCCGTGCGTCGGCGCGACGCCCGCCAACAACCACGAATCCTCACTGATCCGTCAGGAGG CGGGCGTGCCGGACCGCAACACGTTGACCGCCGCGGCCGAGCGATTCGGGATCGACCAGGTGACGGGTCCCGCGGGCACC GCGCTGTGGTTCGACTCGAACCTGATGCACGGGTCGGGTTCGAACATCACCCCGTTTCCGCGGTCGAACATCTTCCTGGT GTTCAACTCGGTGGAGAACCGGTTGTCGGAGCCGTTCGCGGCGTCGAGGCCTCGCCCGGAGTACCTCGCCGCCCGGGATA TGCGGCGAGTCGGTAACTGA
Upstream 100 bases:
>100_bases GTCACGAACAGCTCCGCATGCTGTGCGTGTTCAACCCGCCGGTCACGGGTCAGGAGGTCCACGACGAGTCCGGTGCCTAT CCGGCGCCGGTGGCGAGTTG
Downstream 100 bases:
>100_bases CTGTCCCGAGTTCGACCCGGCCCGGTTCTGGGTATGCGGTCCCAAACGTGAGGTCGACGGGAGGCGCGCGATGGTGGTGC TGGGTGTGTTGTTGCTGATC
Product: ectoine hydroxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MAVDTTHRVRDHYPTRLDQPAEPITRAEPTVWGREPDGPLTGADLRTMAGAGYLVRPDTLDPIWLAPLQDELARISTVAD AGDPRIIRERTGGIRSVFQPHLFSEVIAEVISLDTVLPVARQILGSDVYIHQARINVMPGFTGGGFYWHSDFETWHAEDG MPAMRAVSCSIALTENFPHNGSLMVMPGSHEVFYPCVGATPANNHESSLIRQEAGVPDRNTLTAAAERFGIDQVTGPAGT ALWFDSNLMHGSGSNITPFPRSNIFLVFNSVENRLSEPFAASRPRPEYLAARDMRRVGN
Sequences:
>Translated_299_residues MAVDTTHRVRDHYPTRLDQPAEPITRAEPTVWGREPDGPLTGADLRTMAGAGYLVRPDTLDPIWLAPLQDELARISTVAD AGDPRIIRERTGGIRSVFQPHLFSEVIAEVISLDTVLPVARQILGSDVYIHQARINVMPGFTGGGFYWHSDFETWHAEDG MPAMRAVSCSIALTENFPHNGSLMVMPGSHEVFYPCVGATPANNHESSLIRQEAGVPDRNTLTAAAERFGIDQVTGPAGT ALWFDSNLMHGSGSNITPFPRSNIFLVFNSVENRLSEPFAASRPRPEYLAARDMRRVGN >Mature_298_residues AVDTTHRVRDHYPTRLDQPAEPITRAEPTVWGREPDGPLTGADLRTMAGAGYLVRPDTLDPIWLAPLQDELARISTVADA GDPRIIRERTGGIRSVFQPHLFSEVIAEVISLDTVLPVARQILGSDVYIHQARINVMPGFTGGGFYWHSDFETWHAEDGM PAMRAVSCSIALTENFPHNGSLMVMPGSHEVFYPCVGATPANNHESSLIRQEAGVPDRNTLTAAAERFGIDQVTGPAGTA LWFDSNLMHGSGSNITPFPRSNIFLVFNSVENRLSEPFAASRPRPEYLAARDMRRVGN
Specific function: Catalyzes the conversion of ectoine to hydroxyectoine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PhyH family. EctD subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012774 - InterPro: IPR008775 [H]
Pfam domain/function: PF05721 PhyH [H]
EC number: NA
Molecular weight: Translated: 32841; Mature: 32710
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDTTHRVRDHYPTRLDQPAEPITRAEPTVWGREPDGPLTGADLRTMAGAGYLVRPDTL CCCCCCHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHCCCCEEECCCCC DPIWLAPLQDELARISTVADAGDPRIIRERTGGIRSVFQPHLFSEVIAEVISLDTVLPVA CCEEECCHHHHHHHHHHHHCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RQILGSDVYIHQARINVMPGFTGGGFYWHSDFETWHAEDGMPAMRAVSCSIALTENFPHN HHHHCCCEEEEEEEEEECCCCCCCCCEECCCCCEEECCCCCCHHHHEEEEEEEECCCCCC GSLMVMPGSHEVFYPCVGATPANNHESSLIRQEAGVPDRNTLTAAAERFGIDQVTGPAGT CEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCE ALWFDSNLMHGSGSNITPFPRSNIFLVFNSVENRLSEPFAASRPRPEYLAARDMRRVGN EEEEECCEECCCCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure AVDTTHRVRDHYPTRLDQPAEPITRAEPTVWGREPDGPLTGADLRTMAGAGYLVRPDTL CCCCCHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHCCCCEEECCCCC DPIWLAPLQDELARISTVADAGDPRIIRERTGGIRSVFQPHLFSEVIAEVISLDTVLPVA CCEEECCHHHHHHHHHHHHCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RQILGSDVYIHQARINVMPGFTGGGFYWHSDFETWHAEDGMPAMRAVSCSIALTENFPHN HHHHCCCEEEEEEEEEECCCCCCCCCEECCCCCEEECCCCCCHHHHEEEEEEEECCCCCC GSLMVMPGSHEVFYPCVGATPANNHESSLIRQEAGVPDRNTLTAAAERFGIDQVTGPAGT CEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCE ALWFDSNLMHGSGSNITPFPRSNIFLVFNSVENRLSEPFAASRPRPEYLAARDMRRVGN EEEEECCEECCCCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA