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The map label for this gene is ybiH [C]

Identifier: 119870100

GI number: 119870100

Start: 4295968

End: 4296654

Strand: Direct

Name: ybiH [C]

Synonym: Mkms_4070

Alternate gene names: 119870100

Gene position: 4295968-4296654 (Clockwise)

Preceding gene: 119870099

Following gene: 119870101

Centisome position: 74.88

GC content: 67.83

Gene sequence:

>687_bases
ATGCGTTCAGCCGACGCCGACCGGACCACCCTCGCCCGTATCCGAGATGCGGCGATCGAGCAGTTCGGCCGGCACGGCTT
CGGCGTCGGAGTGCGCACGATCGCCGAATCCGCCGGGGTGAGCCCCGCGCTGGTGATCCACCACTTCGGTTCCAAGGACG
GCCTGCGCAAGGCCTGCGACGAATACGTCGCCGAGGTGATCCGCAGCGACAAGTCGGCCTCGATCCAGAGCAACGATCCG
GCGACCTGGCTGGCGCAGATCGCCGAGATCGAGTCGTACGCCCCGCTGATGGCCTACCTGGTGCGCAGCCTGCAGTCCGG
CGGCGACCTGGCGCGGGCGTTCTGGCGGCGGATGATCGACAACGTCGAGCAGTATCTCGACGAGGGGGTCCGCGCGGGTA
CGGTCAAACCCAGCCACGACCCCCGAGGACGGGCCCGCTTCCTGGCGATGGCCAGCGGCGGCGGCTTCCTGCTGTATCTG
CAGATGCACGAGGACCCGACCGACCTGCGCCGGGTCCTGCGCGACTACTCCGACGACATGGTCCTGCCCGCCCTCGAGAT
CTACACCAACGGGCTGATGGCCGATTCGACGATGTACGACGCCTTCCTGGCAAACCAGGGCGCCTCATCCACACACCAAG
GAGACGGTGATGACGGTTCAGACGAGCAGGTCCCCGCGACGGCCTGA

Upstream 100 bases:

>100_bases
CTCGGCGACGGCCTTCTCGCCGCCGCCCGCGACTGACGTTTCCCCTCGACGAGCGGTGCGGTCTTGACCCGCGACTGAAC
GCGCGTTTAGCATCTTGAAC

Downstream 100 bases:

>100_bases
GGGCACGACACCCCCGGCCGTCGAAATCCGGGGACTGGTCAAGACATTCGGCCGCACCCGGGCGCTCGACGGTCTCGACA
TGAGCGTCTCCCCCGGTGAC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator; Regulatory Protein TetR; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MRSADADRTTLARIRDAAIEQFGRHGFGVGVRTIAESAGVSPALVIHHFGSKDGLRKACDEYVAEVIRSDKSASIQSNDP
ATWLAQIAEIESYAPLMAYLVRSLQSGGDLARAFWRRMIDNVEQYLDEGVRAGTVKPSHDPRGRARFLAMASGGGFLLYL
QMHEDPTDLRRVLRDYSDDMVLPALEIYTNGLMADSTMYDAFLANQGASSTHQGDGDDGSDEQVPATA

Sequences:

>Translated_228_residues
MRSADADRTTLARIRDAAIEQFGRHGFGVGVRTIAESAGVSPALVIHHFGSKDGLRKACDEYVAEVIRSDKSASIQSNDP
ATWLAQIAEIESYAPLMAYLVRSLQSGGDLARAFWRRMIDNVEQYLDEGVRAGTVKPSHDPRGRARFLAMASGGGFLLYL
QMHEDPTDLRRVLRDYSDDMVLPALEIYTNGLMADSTMYDAFLANQGASSTHQGDGDDGSDEQVPATA
>Mature_228_residues
MRSADADRTTLARIRDAAIEQFGRHGFGVGVRTIAESAGVSPALVIHHFGSKDGLRKACDEYVAEVIRSDKSASIQSNDP
ATWLAQIAEIESYAPLMAYLVRSLQSGGDLARAFWRRMIDNVEQYLDEGVRAGTVKPSHDPRGRARFLAMASGGGFLLYL
QMHEDPTDLRRVLRDYSDDMVLPALEIYTNGLMADSTMYDAFLANQGASSTHQGDGDDGSDEQVPATA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24872; Mature: 24872

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSADADRTTLARIRDAAIEQFGRHGFGVGVRTIAESAGVSPALVIHHFGSKDGLRKACD
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH
EYVAEVIRSDKSASIQSNDPATWLAQIAEIESYAPLMAYLVRSLQSGGDLARAFWRRMID
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NVEQYLDEGVRAGTVKPSHDPRGRARFLAMASGGGFLLYLQMHEDPTDLRRVLRDYSDDM
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCCH
VLPALEIYTNGLMADSTMYDAFLANQGASSTHQGDGDDGSDEQVPATA
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSADADRTTLARIRDAAIEQFGRHGFGVGVRTIAESAGVSPALVIHHFGSKDGLRKACD
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH
EYVAEVIRSDKSASIQSNDPATWLAQIAEIESYAPLMAYLVRSLQSGGDLARAFWRRMID
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NVEQYLDEGVRAGTVKPSHDPRGRARFLAMASGGGFLLYLQMHEDPTDLRRVLRDYSDDM
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCCH
VLPALEIYTNGLMADSTMYDAFLANQGASSTHQGDGDDGSDEQVPATA
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA