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The map label for this gene is soxC [H]

Identifier: 119870036

GI number: 119870036

Start: 4224069

End: 4225271

Strand: Direct

Name: soxC [H]

Synonym: Mkms_4006

Alternate gene names: 119870036

Gene position: 4224069-4225271 (Clockwise)

Preceding gene: 119870035

Following gene: 119870040

Centisome position: 73.63

GC content: 70.07

Gene sequence:

>1203_bases
GTGGAGAACGCCAGGGCCCTGCCCGGCTCACCGGAATTCGCTGTCCTGCTGGCCCAGATCGCGGCGGGCGCACGCGACCG
GGACCGCGACGACGAGAACCCCTTCGACCAGGTGGCCGCACTCAAACGTGCCGGGTTCGGCGCGCTGCGGCTGCCGGAGT
CTCTGGGTGGCGCCGGACTGACTGTGCCGCAGTTGTTCTCGACGATCATCGACGTGGCCGCCGCCGACCCGATCGTCGCG
CACATCTTCCGCGCCCACTTCTGGTTCGTCGAGGAGCGGCTGCGCACCGCCGACGACCCGGCGTCGCGGCGCTGGCTGGA
CCGGGTGCTCGACGGCAAGATCGTCGGCAACGCGTTCAGCGAGAAGGGCGGGTTGGCCGTCGGCAGCCTGGTGTTCGACA
CCCGCCTGCTGCCCGACGGGCAGGGCGGCTACCGGCTGACCGGTGAGAAGTACTACAGCACCGGCACGTTGTTCTCCGAT
TATCTGACGGTGACCGCGACCACCGACCACGATTCGGTGGCGACGGTGGTGGTACCCGCCGACCGCGAAGGCGTCGGGAT
CGTCGACGACTGGGACGGCTTCGGGCAGCGCCGGACGGGCACCGGCACCACGACGTTCACCGATGTCGCGGTGGCGGCCG
ACGAGGTGCTCACCGATGCGCCGTACGACGCCGAACCGCAGCCGACGGTGCAGTTCGCGTTCCTGCAGTTGTTCATCCAC
GCCGTGGTCGCGGGGATCCTGGAGAACGTGGTGGAGGACGGGGTCGCGCTGTTGGAGTCGCGTGAGCGCAACTTCAGCCA
TGCGGTGGCGGAGCGGCCGGTCGACGACCCGTTGCTGCAGCGGCAGCTCGGCGAACTGGCCAGCACCGCCTACGTCGCCC
GGGCGGCTGTGCTGGATGCCGCCGCGATCATCGGTGCGGCCACCGATTCGGCGGTCGACGGGGTGCCGGACGCGACGCTG
GCGCAGGACGCGCAACTCGCCGTCGCGAAGGTGAAGGTGCATCTGGACCGGGTGGCGCCGGACGCCGCCACCCGCCTGCT
GGAACTCGGCGGGGCCAGCGCCGCAAGCCGGACACGCAATCTCGACCGGCACTGGCGCAACATCCGCACGATCACACTGC
ACAATCCGGTCGCGTACAAGGCGCGGGTGGTCGGCGAGAACCTGCTACACGGCACGCCGGTTCCCGCCAACGCATACTTC
TGA

Upstream 100 bases:

>100_bases
ACTCGAAGATCGGCTTCGTGAAGTAGCCGGGTTCGGGTCCCGCTGATCCAAACGGTGCTGCCCGGCAGGCGGCCTCGGTA
GAACCGAGGACATGACGACT

Downstream 100 bases:

>100_bases
GGGCTTCGCGCTCTCAGGTGGGGTTGCCGGGGCGCTTGACCGCCTTCTTGGCAGGCGCCTTCTTGGCCGGGGTCTTCTTG
GCCGGGGTCTTCTTGGCGGC

Product: acyl-CoA dehydrogenase type 2

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MENARALPGSPEFAVLLAQIAAGARDRDRDDENPFDQVAALKRAGFGALRLPESLGGAGLTVPQLFSTIIDVAAADPIVA
HIFRAHFWFVEERLRTADDPASRRWLDRVLDGKIVGNAFSEKGGLAVGSLVFDTRLLPDGQGGYRLTGEKYYSTGTLFSD
YLTVTATTDHDSVATVVVPADREGVGIVDDWDGFGQRRTGTGTTTFTDVAVAADEVLTDAPYDAEPQPTVQFAFLQLFIH
AVVAGILENVVEDGVALLESRERNFSHAVAERPVDDPLLQRQLGELASTAYVARAAVLDAAAIIGAATDSAVDGVPDATL
AQDAQLAVAKVKVHLDRVAPDAATRLLELGGASAASRTRNLDRHWRNIRTITLHNPVAYKARVVGENLLHGTPVPANAYF

Sequences:

>Translated_400_residues
MENARALPGSPEFAVLLAQIAAGARDRDRDDENPFDQVAALKRAGFGALRLPESLGGAGLTVPQLFSTIIDVAAADPIVA
HIFRAHFWFVEERLRTADDPASRRWLDRVLDGKIVGNAFSEKGGLAVGSLVFDTRLLPDGQGGYRLTGEKYYSTGTLFSD
YLTVTATTDHDSVATVVVPADREGVGIVDDWDGFGQRRTGTGTTTFTDVAVAADEVLTDAPYDAEPQPTVQFAFLQLFIH
AVVAGILENVVEDGVALLESRERNFSHAVAERPVDDPLLQRQLGELASTAYVARAAVLDAAAIIGAATDSAVDGVPDATL
AQDAQLAVAKVKVHLDRVAPDAATRLLELGGASAASRTRNLDRHWRNIRTITLHNPVAYKARVVGENLLHGTPVPANAYF
>Mature_400_residues
MENARALPGSPEFAVLLAQIAAGARDRDRDDENPFDQVAALKRAGFGALRLPESLGGAGLTVPQLFSTIIDVAAADPIVA
HIFRAHFWFVEERLRTADDPASRRWLDRVLDGKIVGNAFSEKGGLAVGSLVFDTRLLPDGQGGYRLTGEKYYSTGTLFSD
YLTVTATTDHDSVATVVVPADREGVGIVDDWDGFGQRRTGTGTTTFTDVAVAADEVLTDAPYDAEPQPTVQFAFLQLFIH
AVVAGILENVVEDGVALLESRERNFSHAVAERPVDDPLLQRQLGELASTAYVARAAVLDAAAIIGAATDSAVDGVPDATL
AQDAQLAVAKVKVHLDRVAPDAATRLLELGGASAASRTRNLDRHWRNIRTITLHNPVAYKARVVGENLLHGTPVPANAYF

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42785; Mature: 42785

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENARALPGSPEFAVLLAQIAAGARDRDRDDENPFDQVAALKRAGFGALRLPESLGGAGL
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCHHCCCCCC
TVPQLFSTIIDVAAADPIVAHIFRAHFWFVEERLRTADDPASRRWLDRVLDGKIVGNAFS
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEECCCCC
EKGGLAVGSLVFDTRLLPDGQGGYRLTGEKYYSTGTLFSDYLTVTATTDHDSVATVVVPA
CCCCEEEHHHHHHHCCCCCCCCCEEECCCEEECCCCEEECEEEEEEECCCCCEEEEEEEC
DREGVGIVDDWDGFGQRRTGTGTTTFTDVAVAADEVLTDAPYDAEPQPTVQFAFLQLFIH
CCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AVVAGILENVVEDGVALLESRERNFSHAVAERPVDDPLLQRQLGELASTAYVARAAVLDA
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAIIGAATDSAVDGVPDATLAQDAQLAVAKVKVHLDRVAPDAATRLLELGGASAASRTRN
HHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHH
LDRHWRNIRTITLHNPVAYKARVVGENLLHGTPVPANAYF
HHHHHHCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MENARALPGSPEFAVLLAQIAAGARDRDRDDENPFDQVAALKRAGFGALRLPESLGGAGL
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCHHCCCCCC
TVPQLFSTIIDVAAADPIVAHIFRAHFWFVEERLRTADDPASRRWLDRVLDGKIVGNAFS
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEECCCCC
EKGGLAVGSLVFDTRLLPDGQGGYRLTGEKYYSTGTLFSDYLTVTATTDHDSVATVVVPA
CCCCEEEHHHHHHHCCCCCCCCCEEECCCEEECCCCEEECEEEEEEECCCCCEEEEEEEC
DREGVGIVDDWDGFGQRRTGTGTTTFTDVAVAADEVLTDAPYDAEPQPTVQFAFLQLFIH
CCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AVVAGILENVVEDGVALLESRERNFSHAVAERPVDDPLLQRQLGELASTAYVARAAVLDA
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAIIGAATDSAVDGVPDATLAQDAQLAVAKVKVHLDRVAPDAATRLLELGGASAASRTRN
HHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHH
LDRHWRNIRTITLHNPVAYKARVVGENLLHGTPVPANAYF
HHHHHHCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]