| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is acrR [C]
Identifier: 119869996
GI number: 119869996
Start: 4177981
End: 4178577
Strand: Direct
Name: acrR [C]
Synonym: Mkms_3966
Alternate gene names: 119869996
Gene position: 4177981-4178577 (Clockwise)
Preceding gene: 119869994
Following gene: 119870004
Centisome position: 72.82
GC content: 71.19
Gene sequence:
>597_bases ATGACGCCCGCGCAGTCCGTGCGTGACCGCTTGATGGATGCGGCGGAATCCTGCTTGCGCGCCAAGGGGATTCGGGCCAC GACAGTGTCGGAGGTCGCGGAGGTCGCCGGGGTGTCCCGCGGCTGGCTCTACCGGCACTTCCCCGACAAGGTGTCCCTGC TCGGCGCGGCGATCGTGCGGCTCAACGAGGCCTACTGGTCCGAGGCGCACGCCGTTCTCGAGCCCATCGACGGGCTGGCC GAGCAGATCGTGGCGGGCATCCGGCACGGACGGCTGGCCTACGACGACCCCGGTGCCCTGCTGATGAAGCTGCGCCTCGA AGAACCCGAGGAGTTCGCGGCCTGCGCAGGCGCCGGCGTGCAGGGGCTGGTCCCCGACCTCGCCGCCTTCTGGAGCCGCT ACCTGCTGGCCGCCCGCGAGCGGGGTGAGATCCATCCGGCCACCGATATCGCCGAGGCGTCGGAGTGGGTGGCGCGTTCG GTGATCTCGCTGGCGACGGTGCCGGGCAACACGCTCGATCCCGCCGACCCGGCGGCCCTGCTCACCCACATCCGCAGGTA TGTGATGCCGGGGTTGACGGCCGATCCCGCGGTCTGA
Upstream 100 bases:
>100_bases GCCCGGCGCTCCGGACCGGCGCGCCTGTTGGCAGAATGCACTCGTCGCGGTTGTCCGCGCGGCGAAATGCTCGAAGGGGG ACCGAAGCCCGGTGACGGCC
Downstream 100 bases:
>100_bases CGCGAAAAAGGCCCCCACCTCGACGGCGGGGGCCCTCCTCGTAGCACGGATCAGTCGTTGTCCACCGACCCCGGTGTGTT CTTGGAGACCTGCACCAGGA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; TetR-Family Protein Transcriptional Regulator; Regulatory Protein TetR
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MTPAQSVRDRLMDAAESCLRAKGIRATTVSEVAEVAGVSRGWLYRHFPDKVSLLGAAIVRLNEAYWSEAHAVLEPIDGLA EQIVAGIRHGRLAYDDPGALLMKLRLEEPEEFAACAGAGVQGLVPDLAAFWSRYLLAARERGEIHPATDIAEASEWVARS VISLATVPGNTLDPADPAALLTHIRRYVMPGLTADPAV
Sequences:
>Translated_198_residues MTPAQSVRDRLMDAAESCLRAKGIRATTVSEVAEVAGVSRGWLYRHFPDKVSLLGAAIVRLNEAYWSEAHAVLEPIDGLA EQIVAGIRHGRLAYDDPGALLMKLRLEEPEEFAACAGAGVQGLVPDLAAFWSRYLLAARERGEIHPATDIAEASEWVARS VISLATVPGNTLDPADPAALLTHIRRYVMPGLTADPAV >Mature_197_residues TPAQSVRDRLMDAAESCLRAKGIRATTVSEVAEVAGVSRGWLYRHFPDKVSLLGAAIVRLNEAYWSEAHAVLEPIDGLAE QIVAGIRHGRLAYDDPGALLMKLRLEEPEEFAACAGAGVQGLVPDLAAFWSRYLLAARERGEIHPATDIAEASEWVARSV ISLATVPGNTLDPADPAALLTHIRRYVMPGLTADPAV
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21291; Mature: 21159
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAQSVRDRLMDAAESCLRAKGIRATTVSEVAEVAGVSRGWLYRHFPDKVSLLGAAIVR CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHH LNEAYWSEAHAVLEPIDGLAEQIVAGIRHGRLAYDDPGALLMKLRLEEPEEFAACAGAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCC QGLVPDLAAFWSRYLLAARERGEIHPATDIAEASEWVARSVISLATVPGNTLDPADPAAL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LTHIRRYVMPGLTADPAV HHHHHHHHCCCCCCCCCC >Mature Secondary Structure TPAQSVRDRLMDAAESCLRAKGIRATTVSEVAEVAGVSRGWLYRHFPDKVSLLGAAIVR CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHH LNEAYWSEAHAVLEPIDGLAEQIVAGIRHGRLAYDDPGALLMKLRLEEPEEFAACAGAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCC QGLVPDLAAFWSRYLLAARERGEIHPATDIAEASEWVARSVISLATVPGNTLDPADPAAL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LTHIRRYVMPGLTADPAV HHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA