| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is dhbE [H]
Identifier: 119869566
GI number: 119869566
Start: 3721273
End: 3722922
Strand: Direct
Name: dhbE [H]
Synonym: Mkms_3534
Alternate gene names: 119869566
Gene position: 3721273-3722922 (Clockwise)
Preceding gene: 119869557
Following gene: 119869569
Centisome position: 64.86
GC content: 70.0
Gene sequence:
>1650_bases ATGAGCACCGGATTCCAGCATGTGCACAGCGACCTGACCGATGGCTTCGTCCCATTCCCCGAAGACCGCGCCGAGCAGTA CCGGCGGGCCGGGTACTGGACCGGGCGGCCCCTCGAGTCCCTTCTCCTTGACGCGGCACACCGACGGCCCGATCACCCGG CCGTCGTCGACGTCGACGGATCCCTCACGTTCGCGGAGCTGACCGCGCGCGCCGACACCGTCGCCGCGGCGCTGGCCGGA CTCGGGATCCGTCCTGGTGACCGGGTGCTGCTGCAACTACCCAACTCCGTGCGTTTCGCCGTCGCGTTCTTCGGTCTGCT GCGGGCGGGCGCGGTGCCGGTGATGTGCCTGCCCGGCCACCGCACCGCCGAGCTGGGACACTTCGCCGACGTCAGCGGCG CGGTGGCGCTGATCGTGCCCGACGAGGTCGGCGGCTTCGACTACCGCGAGATGGCCGCCCAGTTGGTGGCGGACCGGCCC ACGCTGCGGCACGTGCTCGTCGACGGTGACCCGGGACCGTTCCTATCGTGGGCGGCACTGATCGACAGCGGCGGCGTGGC ACCGGAGATCGGACCCGTCGACACCTCGCTGCCTGCCCTGCTGCTGGTCTCCGGCGGAACGACCGGACTGCCCAAGCTGA TCCCCCGCACCCACGACGACTACGTCTACACCGCGGTGTCGAGCGCGCAGGCGTGCCACTTCACCCCCGACGACGTCTAC CTGGTGGCGTTGCCGGCCGGCCACAACTTCCCGTTGGCGTGCCCCGGCATGCTGGGGGCAATGACCGTGGGGGCGACGAC GGTGTTCACCGCCGATCCCAGCCCGGAGGAGGCGTTCGCGCTCATCGACAAACACCAGGTGACCGTCACCGGGCTGGTCA ACGCGCTGGGCAAGCTGTGGGCGCAGGCGTGCGACTGGGAACCGGTGCTGCCGACGTCGCTGCGCCTGGTGCAGGTGGGC GGTTCGCGGATGAGCCCGGAGGAGGCGCGGTTCATCCTCGATCGCCTGACCCCCGGGCTGTCCCAGATCTTCGGAATGGC CGAGGGCATGCTGAATTTCACGCGGCCGGGAGATCCGCTCGACGTCGTGGTGCACACCCAGGGCAGGCCGGTCTCCCCGC ACGACGAGATGCGGGTGGTCGACGAGTCCGGTGTCGAGGTCGCACCGGGTGAAGAGGGCGAACTGCTGGTGCGCGGTCCC AACACACTCAACGGGTACTACCGGGCCGACGAGGCCAACGCCCGGTGCTTCAGCCCGGACGGCTTCTACCGCACCGGGGA CCGGGTGCGGATCTTCGCCGACGGCCCGCTGGCCGGCAACGTCGAGGTGACCGGCCGGATCAAGGACGTCATCCACCGCG GCGGTGAGACGGTTTCGGCGACCGACCTCGAGGACCATCTGCTGACCCACCCCGCGATCTATGCGGCGGCCGCCGTCGCG CTACCCGACGACTATCTCGGTGAGAAGATCTGCGCCGCAGTGGTGTTCCGCGGCAAGCAGCTCACGCTCGCCGAACTCAA CGCATTCCTCGACGAACGCGGGGCGTCCACTCACGCCCGGCCCGACGTGCTGGCTGCGATGCCGTCGCTGCCGCTGACCG CGGTCGGCAAGGTCGACAAGAAGAAGCTCGTCGCCCAGCTGACGGGGTGA
Upstream 100 bases:
>100_bases ACCGTGTTCCTCCAAGTCAACGTAGGCTGCCCTAACTTCAGGAAGGCTATCCTATATTCAGGGAGTCGAACACTCCTACC TCGAGGGGCCTCTACGCGCG
Downstream 100 bases:
>100_bases CCGCGCGTTACGAGCCGCGTTCGTGACCGGATGGCGGAAATCAGGGCCGGTTTCCGCCGTGACGTCACGAACGCGGACCG TCGGCCCCCACTTATGCGGC
Product: AMP-dependent synthetase and ligase
Products: NA
Alternate protein names: Dihydroxybenzoic acid-activating enzyme [H]
Number of amino acids: Translated: 549; Mature: 548
Protein sequence:
>549_residues MSTGFQHVHSDLTDGFVPFPEDRAEQYRRAGYWTGRPLESLLLDAAHRRPDHPAVVDVDGSLTFAELTARADTVAAALAG LGIRPGDRVLLQLPNSVRFAVAFFGLLRAGAVPVMCLPGHRTAELGHFADVSGAVALIVPDEVGGFDYREMAAQLVADRP TLRHVLVDGDPGPFLSWAALIDSGGVAPEIGPVDTSLPALLLVSGGTTGLPKLIPRTHDDYVYTAVSSAQACHFTPDDVY LVALPAGHNFPLACPGMLGAMTVGATTVFTADPSPEEAFALIDKHQVTVTGLVNALGKLWAQACDWEPVLPTSLRLVQVG GSRMSPEEARFILDRLTPGLSQIFGMAEGMLNFTRPGDPLDVVVHTQGRPVSPHDEMRVVDESGVEVAPGEEGELLVRGP NTLNGYYRADEANARCFSPDGFYRTGDRVRIFADGPLAGNVEVTGRIKDVIHRGGETVSATDLEDHLLTHPAIYAAAAVA LPDDYLGEKICAAVVFRGKQLTLAELNAFLDERGASTHARPDVLAAMPSLPLTAVGKVDKKKLVAQLTG
Sequences:
>Translated_549_residues MSTGFQHVHSDLTDGFVPFPEDRAEQYRRAGYWTGRPLESLLLDAAHRRPDHPAVVDVDGSLTFAELTARADTVAAALAG LGIRPGDRVLLQLPNSVRFAVAFFGLLRAGAVPVMCLPGHRTAELGHFADVSGAVALIVPDEVGGFDYREMAAQLVADRP TLRHVLVDGDPGPFLSWAALIDSGGVAPEIGPVDTSLPALLLVSGGTTGLPKLIPRTHDDYVYTAVSSAQACHFTPDDVY LVALPAGHNFPLACPGMLGAMTVGATTVFTADPSPEEAFALIDKHQVTVTGLVNALGKLWAQACDWEPVLPTSLRLVQVG GSRMSPEEARFILDRLTPGLSQIFGMAEGMLNFTRPGDPLDVVVHTQGRPVSPHDEMRVVDESGVEVAPGEEGELLVRGP NTLNGYYRADEANARCFSPDGFYRTGDRVRIFADGPLAGNVEVTGRIKDVIHRGGETVSATDLEDHLLTHPAIYAAAAVA LPDDYLGEKICAAVVFRGKQLTLAELNAFLDERGASTHARPDVLAAMPSLPLTAVGKVDKKKLVAQLTG >Mature_548_residues STGFQHVHSDLTDGFVPFPEDRAEQYRRAGYWTGRPLESLLLDAAHRRPDHPAVVDVDGSLTFAELTARADTVAAALAGL GIRPGDRVLLQLPNSVRFAVAFFGLLRAGAVPVMCLPGHRTAELGHFADVSGAVALIVPDEVGGFDYREMAAQLVADRPT LRHVLVDGDPGPFLSWAALIDSGGVAPEIGPVDTSLPALLLVSGGTTGLPKLIPRTHDDYVYTAVSSAQACHFTPDDVYL VALPAGHNFPLACPGMLGAMTVGATTVFTADPSPEEAFALIDKHQVTVTGLVNALGKLWAQACDWEPVLPTSLRLVQVGG SRMSPEEARFILDRLTPGLSQIFGMAEGMLNFTRPGDPLDVVVHTQGRPVSPHDEMRVVDESGVEVAPGEEGELLVRGPN TLNGYYRADEANARCFSPDGFYRTGDRVRIFADGPLAGNVEVTGRIKDVIHRGGETVSATDLEDHLLTHPAIYAAAAVAL PDDYLGEKICAAVVFRGKQLTLAELNAFLDERGASTHARPDVLAAMPSLPLTAVGKVDKKKLVAQLTG
Specific function: Activation of the carboxylate group of 2,3-dihydroxy- benzoate (DHB), via ATP-dependent PPi exchange reactions, to the acyladenylate [H]
COG id: COG1021
COG function: function code Q; Peptide arylation enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=552, Percent_Identity=25.5434782608696, Blast_Score=139, Evalue=9e-33, Organism=Homo sapiens, GI187761345, Length=546, Percent_Identity=27.8388278388278, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI187761343, Length=546, Percent_Identity=27.8388278388278, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI38505220, Length=530, Percent_Identity=25.0943396226415, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI227499619, Length=572, Percent_Identity=25, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI157311624, Length=521, Percent_Identity=21.6890595009597, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI157311622, Length=521, Percent_Identity=21.6890595009597, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI115511026, Length=549, Percent_Identity=22.9508196721311, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI122937307, Length=538, Percent_Identity=23.7918215613383, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI1786810, Length=530, Percent_Identity=40, Blast_Score=368, Evalue=1e-103, Organism=Escherichia coli, GI145693145, Length=553, Percent_Identity=30.7414104882459, Blast_Score=211, Evalue=7e-56, Organism=Escherichia coli, GI1788107, Length=548, Percent_Identity=27.5547445255474, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI221142682, Length=506, Percent_Identity=27.2727272727273, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1790505, Length=523, Percent_Identity=25.8126195028681, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1789201, Length=545, Percent_Identity=24.5871559633028, Blast_Score=79, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17560308, Length=531, Percent_Identity=26.9303201506591, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17557194, Length=550, Percent_Identity=25.4545454545455, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17538037, Length=533, Percent_Identity=24.953095684803, Blast_Score=111, Evalue=8e-25, Organism=Caenorhabditis elegans, GI71994703, Length=519, Percent_Identity=24.4701348747592, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71994694, Length=519, Percent_Identity=24.4701348747592, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71994690, Length=519, Percent_Identity=24.4701348747592, Blast_Score=109, Evalue=4e-24, Organism=Caenorhabditis elegans, GI32563687, Length=502, Percent_Identity=23.3067729083665, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17531443, Length=503, Percent_Identity=25.2485089463221, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71996755, Length=529, Percent_Identity=22.8733459357278, Blast_Score=93, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17559526, Length=550, Percent_Identity=24, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71983001, Length=540, Percent_Identity=25, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71982997, Length=540, Percent_Identity=25, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71985884, Length=374, Percent_Identity=24.8663101604278, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17560140, Length=497, Percent_Identity=23.943661971831, Blast_Score=74, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6319699, Length=504, Percent_Identity=24.8015873015873, Blast_Score=116, Evalue=7e-27, Organism=Drosophila melanogaster, GI24581924, Length=517, Percent_Identity=26.6924564796905, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI18859661, Length=512, Percent_Identity=25.1953125, Blast_Score=109, Evalue=6e-24, Organism=Drosophila melanogaster, GI21355181, Length=523, Percent_Identity=24.8565965583174, Blast_Score=92, Evalue=9e-19, Organism=Drosophila melanogaster, GI24656500, Length=364, Percent_Identity=26.3736263736264, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI45550496, Length=546, Percent_Identity=23.992673992674, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI45552801, Length=546, Percent_Identity=23.992673992674, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24648260, Length=364, Percent_Identity=25.2747252747253, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24648253, Length=353, Percent_Identity=25.4957507082153, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24648255, Length=353, Percent_Identity=25.4957507082153, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR011963 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: 6.3.2.-
Molecular weight: Translated: 58397; Mature: 58266
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGFQHVHSDLTDGFVPFPEDRAEQYRRAGYWTGRPLESLLLDAAHRRPDHPAVVDVDG CCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEECC SLTFAELTARADTVAAALAGLGIRPGDRVLLQLPNSVRFAVAFFGLLRAGAVPVMCLPGH CEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCC RTAELGHFADVSGAVALIVPDEVGGFDYREMAAQLVADRPTLRHVLVDGDPGPFLSWAAL CCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH IDSGGVAPEIGPVDTSLPALLLVSGGTTGLPKLIPRTHDDYVYTAVSSAQACHFTPDDVY HHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCEEEEEECCCCEEECCCCCEE LVALPAGHNFPLACPGMLGAMTVGATTVFTADPSPEEAFALIDKHQVTVTGLVNALGKLW EEEEECCCCCCEECCCHHHHHHHCCEEEEECCCCHHHHHHHHHCCEEHHHHHHHHHHHHH AQACDWEPVLPTSLRLVQVGGSRMSPEEARFILDRLTPGLSQIFGMAEGMLNFTRPGDPL HHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCE DVVVHTQGRPVSPHDEMRVVDESGVEVAPGEEGELLVRGPNTLNGYYRADEANARCFSPD EEEEECCCCCCCCCHHEEEECCCCCEECCCCCCCEEEECCCCCCCEEECCCCCCEEECCC GFYRTGDRVRIFADGPLAGNVEVTGRIKDVIHRGGETVSATDLEDHLLTHPAIYAAAAVA CCEECCCEEEEEECCCCCCCEEEEHHHHHHHHCCCCEEEECCCHHHHHCCCHHHHHHHHC LPDDYLGEKICAAVVFRGKQLTLAELNAFLDERGASTHARPDVLAAMPSLPLTAVGKVDK CCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHCCCCCH KKLVAQLTG HHHHHCCCC >Mature Secondary Structure STGFQHVHSDLTDGFVPFPEDRAEQYRRAGYWTGRPLESLLLDAAHRRPDHPAVVDVDG CCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEECC SLTFAELTARADTVAAALAGLGIRPGDRVLLQLPNSVRFAVAFFGLLRAGAVPVMCLPGH CEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCC RTAELGHFADVSGAVALIVPDEVGGFDYREMAAQLVADRPTLRHVLVDGDPGPFLSWAAL CCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH IDSGGVAPEIGPVDTSLPALLLVSGGTTGLPKLIPRTHDDYVYTAVSSAQACHFTPDDVY HHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCEEEEEECCCCEEECCCCCEE LVALPAGHNFPLACPGMLGAMTVGATTVFTADPSPEEAFALIDKHQVTVTGLVNALGKLW EEEEECCCCCCEECCCHHHHHHHCCEEEEECCCCHHHHHHHHHCCEEHHHHHHHHHHHHH AQACDWEPVLPTSLRLVQVGGSRMSPEEARFILDRLTPGLSQIFGMAEGMLNFTRPGDPL HHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCE DVVVHTQGRPVSPHDEMRVVDESGVEVAPGEEGELLVRGPNTLNGYYRADEANARCFSPD EEEEECCCCCCCCCHHEEEECCCCCEECCCCCCCEEEECCCCCCCEEECCCCCCEEECCC GFYRTGDRVRIFADGPLAGNVEVTGRIKDVIHRGGETVSATDLEDHLLTHPAIYAAAAVA CCEECCCEEEEEECCCCCCCEEEEHHHHHHHHCCCCEEEECCCHHHHHCCCHHHHHHHHC LPDDYLGEKICAAVVFRGKQLTLAELNAFLDERGASTHARPDVLAAMPSLPLTAVGKVDK CCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHCCCCCH KKLVAQLTG HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8921902; 9384377; 8224884; 12221282 [H]