| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869506
Identifier: 119869506
GI number: 119869506
Start: 3649440
End: 3650336
Strand: Direct
Name: 119869506
Synonym: Mkms_3474
Alternate gene names: NA
Gene position: 3649440-3650336 (Clockwise)
Preceding gene: 119869505
Following gene: 119869507
Centisome position: 63.61
GC content: 71.35
Gene sequence:
>897_bases ATGAACGCGAACGGTAGCGGCATCCTGGTGGGTGTCGACGGCTCGGCGGAGTCCGACGCCGCCATCCGCTGGGCGACCCA GGAGGCGGTGATGCGCCGTGCGCCACTGACGTTGGCGCACGTGGTCGCGGCCGTGGCGACGAGCTCACCGATCGGGCCCA TCCTCGCCGAGATCAACGAGTGGCAGCAGGACAACGCCCGGCACGTCCTCGAACAGGCACTCAAGACCGCGCAGGCCTGC GCACCCGAATCCCATCACCCCGACATCCACACCGAAGTCCTCGGCGCGAGCGTGGTGCCGACGCTGGTGCGCGAATCCGC CGACAAACAGATGATCGTCGTCGGCAACCGCGGAACCGGTGCGCTCGGCCGGCTGCTGCTCGGCTCGGTCAGTACCGGGC TGGTACACCACGCCCACTGCCCGGTGGCCGTCATCCGCCCCACCCGCGGCGGGTCCCCGGACGCCGATGCGCCCGTCCTG CTCGGCATCGACGGGTCACCCGCCTCGGAGGCCGCCACCGCGATGGCGTTCGACGAGGCGGCACGCCGCGGAGTCGACCT GGTGGCCCTGCACGCGTGGAGCGATGTGGCGGTGTTCCCGATAGTGGGTCCGGCCTGGCGCGAATACGAGAGCCAGGGCG AAGAGGTCCTCGGCGAACGGCTCGCCGGCTGGCAGGAACAATATCCCGACGTGCGCGTCCACCGTCGCCTCGTCTGCGAC CAACCGGCCCGATGGCTGATCCGCGAGTCCGAGCACGCGCAGCTGGTGGTGGTCGGCGTCCGCGGCCGCGGCGGCTTCGC AAGCACCTGGCTGGGTTCGGTGAGCTCGGCGGTGGCGCAGTCCGCGGACACCCCGGTGCTCGTGGTGCGCGACGCATCGA GGGGTCAGGGCCGATGA
Upstream 100 bases:
>100_bases GCCCCGACGATCGAGGAGAATCGGGCGCCGACACCGCGGCTTCCCCTCAGCGACGTCATGCAGATTCGACGATCGAACCG CCCTCGGCCGGAGGAGTGAC
Downstream 100 bases:
>100_bases GACGGTCCGGCGAACGCACAGGACACGGACCGGCCATCGTCACGCTGACGATGAACCCGGCGCTCGACATCACCACGAGC GCGCCGCAGGTCCGGCCGAC
Product: UspA domain-containing protein
Products: NA
Alternate protein names: USP Rv2026c [H]
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MNANGSGILVGVDGSAESDAAIRWATQEAVMRRAPLTLAHVVAAVATSSPIGPILAEINEWQQDNARHVLEQALKTAQAC APESHHPDIHTEVLGASVVPTLVRESADKQMIVVGNRGTGALGRLLLGSVSTGLVHHAHCPVAVIRPTRGGSPDADAPVL LGIDGSPASEAATAMAFDEAARRGVDLVALHAWSDVAVFPIVGPAWREYESQGEEVLGERLAGWQEQYPDVRVHRRLVCD QPARWLIRESEHAQLVVVGVRGRGGFASTWLGSVSSAVAQSADTPVLVVRDASRGQGR
Sequences:
>Translated_298_residues MNANGSGILVGVDGSAESDAAIRWATQEAVMRRAPLTLAHVVAAVATSSPIGPILAEINEWQQDNARHVLEQALKTAQAC APESHHPDIHTEVLGASVVPTLVRESADKQMIVVGNRGTGALGRLLLGSVSTGLVHHAHCPVAVIRPTRGGSPDADAPVL LGIDGSPASEAATAMAFDEAARRGVDLVALHAWSDVAVFPIVGPAWREYESQGEEVLGERLAGWQEQYPDVRVHRRLVCD QPARWLIRESEHAQLVVVGVRGRGGFASTWLGSVSSAVAQSADTPVLVVRDASRGQGR >Mature_298_residues MNANGSGILVGVDGSAESDAAIRWATQEAVMRRAPLTLAHVVAAVATSSPIGPILAEINEWQQDNARHVLEQALKTAQAC APESHHPDIHTEVLGASVVPTLVRESADKQMIVVGNRGTGALGRLLLGSVSTGLVHHAHCPVAVIRPTRGGSPDADAPVL LGIDGSPASEAATAMAFDEAARRGVDLVALHAWSDVAVFPIVGPAWREYESQGEEVLGERLAGWQEQYPDVRVHRRLVCD QPARWLIRESEHAQLVVVGVRGRGGFASTWLGSVSSAVAQSADTPVLVVRDASRGQGR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 31434; Mature: 31434
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNANGSGILVGVDGSAESDAAIRWATQEAVMRRAPLTLAHVVAAVATSSPIGPILAEINE CCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHH WQQDNARHVLEQALKTAQACAPESHHPDIHTEVLGASVVPTLVRESADKQMIVVGNRGTG HHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC ALGRLLLGSVSTGLVHHAHCPVAVIRPTRGGSPDADAPVLLGIDGSPASEAATAMAFDEA HHHHHHHHHHHHCCEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH ARRGVDLVALHAWSDVAVFPIVGPAWREYESQGEEVLGERLAGWQEQYPDVRVHRRLVCD HHCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCC QPARWLIRESEHAQLVVVGVRGRGGFASTWLGSVSSAVAQSADTPVLVVRDASRGQGR CCHHHHEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC >Mature Secondary Structure MNANGSGILVGVDGSAESDAAIRWATQEAVMRRAPLTLAHVVAAVATSSPIGPILAEINE CCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHH WQQDNARHVLEQALKTAQACAPESHHPDIHTEVLGASVVPTLVRESADKQMIVVGNRGTG HHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC ALGRLLLGSVSTGLVHHAHCPVAVIRPTRGGSPDADAPVLLGIDGSPASEAATAMAFDEA HHHHHHHHHHHHCCEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH ARRGVDLVALHAWSDVAVFPIVGPAWREYESQGEEVLGERLAGWQEQYPDVRVHRRLVCD HHCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCC QPARWLIRESEHAQLVVVGVRGRGGFASTWLGSVSSAVAQSADTPVLVVRDASRGQGR CCHHHHEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]