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The map label for this gene is qcrB [H]

Identifier: 119869388

GI number: 119869388

Start: 3519392

End: 3521068

Strand: Direct

Name: qcrB [H]

Synonym: Mkms_3356

Alternate gene names: 119869388

Gene position: 3519392-3521068 (Clockwise)

Preceding gene: 119869387

Following gene: 119869393

Centisome position: 61.34

GC content: 66.01

Gene sequence:

>1677_bases
ATGAGTGCACAGAGTGGTTCCAAGATGGCCGCCAGGCTTGCCGCACAGGGAAACGCGATCGATTCGCGCTACCACCCGTC
GGCGGCGGTCCGTCGCCAGCTGAACAAGGTCTTCCCCACCCACTGGTCGTTCCTGCTGGGTGAGATCGCCTTGTACAGCT
TCATCATCCTGCTGATCACCGGCGTCTGGCTCACCCTGTTCTTCGACCCCTCGATGTCCGAGGTCGTCTACGACGGCGTG
TACCAACCGCTGCGCGGCGTCGAGATGTCGAAGGCCTACGAATCGGCACTCGACATCAGCTTCGAGGTACGCGGCGGGCT
GTTCGTCCGTCAGATCCACCACTGGGCGGCACTGCTGTTCGCGGCGTCGATCATGGTGCACCTCGCCCGCATCTTCTTCA
CCGGCGCTTTCCGGCGTCCGCGTGAGGCCAACTGGGTCATCGGCTCGCTGCTGCTGATCCTGGCGATGTTCGAGGGCTTC
TTCGGCTACTCGCTGCCCGACGACCTGCTGTCCGGCACCGGCCTGCGCGCCGCCCTCTCCGGCATCACGATGGGCATCCC
GGTCGTCGGCACGTGGATGCACTGGGCGCTGTTCGGCGGCGACTTCCCCGGCACGATCATCATCCCGCGCCTGTACGCAC
TGCACATCCTGCTGATCCCGGGCATCATGCTCGCGCTCATCGCCGCCCACCTGGCACTGGTGTGGTTCCAGAAGCACACC
CAGTTCCCCGGCCCCGGCCGCACCGAGAAGAACGTCGTCGGCGTGCGCGTCATGCCGGTGTTCGCGGTCAAGTCGGGTGC
GTTCTTCGCCCTGACCGTGGGCATCCTCGGCCTGATGGGCGGTCTGCTGCAGATCAACCCGATCTGGGTTCTGGGCCCCT
ACAAGCCTTCTCAGGTGTCCGCGGGCAGCCAGCCGGACTTCTACATGATGTGGACCGACGGCCTGATCCGGTTGTGGCCG
GCGTGGGAGTTCTACATCGGCAACTACACCATCCCGCAGCCGGTGTGGATCGCGGTGCTGATGGGCCTGATCCTCGGGCT
GCTCACGGTGTATCCGTTCCTCGAGAAGCGGCTCACCGGGGACGACGCCCACCACAACCTGTTGCAGCGTCCGCGTGACG
CCCCGGTCCGCACCGCGATCGGCGCGATGGCGATAGCGTTCTACATTCTGCTGACGTTCGCCTGCATGAACGACATCATC
GCGCTCAAGTTCCACATCTCGCTGAACGCGACGACGTGGATCGGCCGGATCGGCATGGTGGTGTTGCCGGTGATCGTCTA
CTACGTCACCTACCGGTGGGCGGTGTCGTTGCAGCGCAGCGACCGCGAGGTGCTCGAGCACGGCATCGAGACGGGCATCA
TCAAGCGGCTGCCGCACGGCGCCTACATCGAGCTGCACCAGCCGCTCGGACCGGTCGACGCCCACGGGCACCCGATTCCG
CTGGAATACCAGGGCGCTCCTCTGCCGAAGCGGATGAACAAGCTGGGCTCCGGCGGTGCACCGGGCAGCGGCAGCTTCCT
GACCGCCGATCCGATCGTCGAGCACGAGGCACTGACCGAGGCTGCGCACGCCTCACACCGCCGGGCGCTGACCGCCCTAC
GGGAGCGGCAGGGAACCAACGGTTCCAACGGCGCTGCCAACGGCGATGGCGACGGTTCGCCGAACGGCCACCACTAG

Upstream 100 bases:

>100_bases
TCGCGCAGTTGCCCATCACCATTGACCAGGACGGGTACCTGGTCGCCAACGGCGACTTCATCGAACCCGTCGGGCCTGCA
TTCTGGGAACGGAAGACATC

Downstream 100 bases:

>100_bases
AGTCCGACAGCGATACGGCCGCCGCGGTCCTCCCAACGGAGGTCGCGGCGGCCGTTTCGTATGCGGTGAGCGCGTGGAGC
CCGTCGTGAGACTGAACTCC

Product: cytochrome b/b6 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MSAQSGSKMAARLAAQGNAIDSRYHPSAAVRRQLNKVFPTHWSFLLGEIALYSFIILLITGVWLTLFFDPSMSEVVYDGV
YQPLRGVEMSKAYESALDISFEVRGGLFVRQIHHWAALLFAASIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGF
FGYSLPDDLLSGTGLRAALSGITMGIPVVGTWMHWALFGGDFPGTIIIPRLYALHILLIPGIMLALIAAHLALVWFQKHT
QFPGPGRTEKNVVGVRVMPVFAVKSGAFFALTVGILGLMGGLLQINPIWVLGPYKPSQVSAGSQPDFYMMWTDGLIRLWP
AWEFYIGNYTIPQPVWIAVLMGLILGLLTVYPFLEKRLTGDDAHHNLLQRPRDAPVRTAIGAMAIAFYILLTFACMNDII
ALKFHISLNATTWIGRIGMVVLPVIVYYVTYRWAVSLQRSDREVLEHGIETGIIKRLPHGAYIELHQPLGPVDAHGHPIP
LEYQGAPLPKRMNKLGSGGAPGSGSFLTADPIVEHEALTEAAHASHRRALTALRERQGTNGSNGAANGDGDGSPNGHH

Sequences:

>Translated_558_residues
MSAQSGSKMAARLAAQGNAIDSRYHPSAAVRRQLNKVFPTHWSFLLGEIALYSFIILLITGVWLTLFFDPSMSEVVYDGV
YQPLRGVEMSKAYESALDISFEVRGGLFVRQIHHWAALLFAASIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGF
FGYSLPDDLLSGTGLRAALSGITMGIPVVGTWMHWALFGGDFPGTIIIPRLYALHILLIPGIMLALIAAHLALVWFQKHT
QFPGPGRTEKNVVGVRVMPVFAVKSGAFFALTVGILGLMGGLLQINPIWVLGPYKPSQVSAGSQPDFYMMWTDGLIRLWP
AWEFYIGNYTIPQPVWIAVLMGLILGLLTVYPFLEKRLTGDDAHHNLLQRPRDAPVRTAIGAMAIAFYILLTFACMNDII
ALKFHISLNATTWIGRIGMVVLPVIVYYVTYRWAVSLQRSDREVLEHGIETGIIKRLPHGAYIELHQPLGPVDAHGHPIP
LEYQGAPLPKRMNKLGSGGAPGSGSFLTADPIVEHEALTEAAHASHRRALTALRERQGTNGSNGAANGDGDGSPNGHH
>Mature_557_residues
SAQSGSKMAARLAAQGNAIDSRYHPSAAVRRQLNKVFPTHWSFLLGEIALYSFIILLITGVWLTLFFDPSMSEVVYDGVY
QPLRGVEMSKAYESALDISFEVRGGLFVRQIHHWAALLFAASIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGFF
GYSLPDDLLSGTGLRAALSGITMGIPVVGTWMHWALFGGDFPGTIIIPRLYALHILLIPGIMLALIAAHLALVWFQKHTQ
FPGPGRTEKNVVGVRVMPVFAVKSGAFFALTVGILGLMGGLLQINPIWVLGPYKPSQVSAGSQPDFYMMWTDGLIRLWPA
WEFYIGNYTIPQPVWIAVLMGLILGLLTVYPFLEKRLTGDDAHHNLLQRPRDAPVRTAIGAMAIAFYILLTFACMNDIIA
LKFHISLNATTWIGRIGMVVLPVIVYYVTYRWAVSLQRSDREVLEHGIETGIIKRLPHGAYIELHQPLGPVDAHGHPIPL
EYQGAPLPKRMNKLGSGGAPGSGSFLTADPIVEHEALTEAAHASHRRALTALRERQGTNGSNGAANGDGDGSPNGHH

Specific function: Unknown

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61252; Mature: 61121

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQSGSKMAARLAAQGNAIDSRYHPSAAVRRQLNKVFPTHWSFLLGEIALYSFIILLIT
CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GVWLTLFFDPSMSEVVYDGVYQPLRGVEMSKAYESALDISFEVRGGLFVRQIHHWAALLF
HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHH
AASIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGLRAALS
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHH
GITMGIPVVGTWMHWALFGGDFPGTIIIPRLYALHILLIPGIMLALIAAHLALVWFQKHT
HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QFPGPGRTEKNVVGVRVMPVFAVKSGAFFALTVGILGLMGGLLQINPIWVLGPYKPSQVS
CCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCEEECCEEEECCCCCCCCC
AGSQPDFYMMWTDGLIRLWPAWEFYIGNYTIPQPVWIAVLMGLILGLLTVYPFLEKRLTG
CCCCCCEEEEECCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DDAHHNLLQRPRDAPVRTAIGAMAIAFYILLTFACMNDIIALKFHISLNATTWIGRIGMV
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHH
VLPVIVYYVTYRWAVSLQRSDREVLEHGIETGIIKRLPHGAYIELHQPLGPVDAHGHPIP
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC
LEYQGAPLPKRMNKLGSGGAPGSGSFLTADPIVEHEALTEAAHASHRRALTALRERQGTN
CCCCCCCCHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GSNGAANGDGDGSPNGHH
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAQSGSKMAARLAAQGNAIDSRYHPSAAVRRQLNKVFPTHWSFLLGEIALYSFIILLIT
CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GVWLTLFFDPSMSEVVYDGVYQPLRGVEMSKAYESALDISFEVRGGLFVRQIHHWAALLF
HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHH
AASIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGFFGYSLPDDLLSGTGLRAALS
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHH
GITMGIPVVGTWMHWALFGGDFPGTIIIPRLYALHILLIPGIMLALIAAHLALVWFQKHT
HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QFPGPGRTEKNVVGVRVMPVFAVKSGAFFALTVGILGLMGGLLQINPIWVLGPYKPSQVS
CCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCEEECCEEEECCCCCCCCC
AGSQPDFYMMWTDGLIRLWPAWEFYIGNYTIPQPVWIAVLMGLILGLLTVYPFLEKRLTG
CCCCCCEEEEECCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DDAHHNLLQRPRDAPVRTAIGAMAIAFYILLTFACMNDIIALKFHISLNATTWIGRIGMV
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHH
VLPVIVYYVTYRWAVSLQRSDREVLEHGIETGIIKRLPHGAYIELHQPLGPVDAHGHPIP
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC
LEYQGAPLPKRMNKLGSGGAPGSGSFLTADPIVEHEALTEAAHASHRRALTALRERQGTN
CCCCCCCCHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GSNGAANGDGDGSPNGHH
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11234002; 2181404 [H]