| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is camA [H]
Identifier: 119869313
GI number: 119869313
Start: 3439290
End: 3440489
Strand: Direct
Name: camA [H]
Synonym: Mkms_3281
Alternate gene names: 119869313
Gene position: 3439290-3440489 (Clockwise)
Preceding gene: 119869312
Following gene: 119869318
Centisome position: 59.95
GC content: 63.5
Gene sequence:
>1200_bases GTGACTCCCGAACGAGCGGTGATCGTCGGCGCGAGCCACGCCGGCGCGCAGTTGGCAGCTAATCTTCGAAGGGAGGGGTG GTCTGGGGAGGTCGTGCTCATCGGCGACGAGGGGGGACTGCCCTACCACCGGCCTCCGTTGTCGAAGGGATACCTGGCCG GCAAGAACGGCCTCGACGACCTCCTGATTCGCGGCGCTGATTTCTACGAAAAGCAGCACATTCGACTCTTGAATGCGACC GTGGAGGCGATCCACCGGAGTGCCAAGCGTGTGTCTCTGAGCACCGGCGACACGCTGACGTACACCAAGCTCGCGTTGTG CACCGGCGCAAGGGCCAGACGACTCCCCACACCAGGGGTGGATCTTCCCGGAATTCACTACCTGCGTACCGCTGCAGACG TCGAGTTGATCCGTGCCGCCGCTACACCGGGTCGGAGGGTTGTGATCGTGGGCGGCGGTTACATCGGGTTGGAAACGGCG GCCTCGCTGTGTTCGCTCGGCATGAACGTCACCGTCCTCGAGGCAACCGAGCGTGTACTCGAACGGGTCACCGCGCCGGA GGTTTCCGCGTTTTACACCCGAATCCACAACGGCGAGGGAGTGGAGATCCGAACACACGCTCTCGTCGAAGCCTTCTCCG GCAACGGCAGAGTGCAGGAGGTCGTGCTGGCAGGCGGCGAACCGATCCCCGCCGACTTGGTCATCGTCGGCGTCGGTGTG GTGCCGAACACCGAGCTCGCCTCGGCCGCAGGATTATCCGTCGACAACGGCATCGTGATCGACGACCAGGCCCGCACCAG CGACCCCGACATCGTGGCCGCCGGCGACTGCACCAGCCACACCATGGCTCGATACGGCTCGCGTATTCGTTTGGAATCCG TATCGAGCGCCGGCGAGCAGGCCAAGATCGCTGCGGCGACAATCTGCGGAAAACACAGCGCAATCGCTGCGCTTCCGTGG TTCTGGTCCGACCAGTACGATCTCAAACTCCAGATCGCCGGTCTCAACACCGGATACGACGAAGTGGTCTTCAGCGGCGA CCCGTCGCGTGACCGTGACTTCAGCTGCTTCTACTTCCGCGATCGTGAACTCATCGCCGCCGACTGCGTCAACCGTCCTC GCGATTTCATGTTCAGTAAGCGGGCCATCAGCCAGCAGCTCCGAGTTGACCGCTCAGAGCTCCTCGCCGGCTCGATCTGA
Upstream 100 bases:
>100_bases TTGAGAACATCGAGGTGGTCGGCGAACCCGAGTATGTGCAATCGAATTTCGTCAGGGGTATCAGCAAGCTGATGGTTCGC CTCACTCCCAGGCCAAGTGC
Downstream 100 bases:
>100_bases CACGAGAGCTTGCTAGTTACAAACTGTGGACAACTCCCAGGTACCTGAGTGCTACGCGGGAGATCCGCTCACCGGTGGTG GCGATGTCCGCGGCTGGGAG
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: Oxidized Ferredoxin; NADH; cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol; NAD [C]
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MTPERAVIVGASHAGAQLAANLRREGWSGEVVLIGDEGGLPYHRPPLSKGYLAGKNGLDDLLIRGADFYEKQHIRLLNAT VEAIHRSAKRVSLSTGDTLTYTKLALCTGARARRLPTPGVDLPGIHYLRTAADVELIRAAATPGRRVVIVGGGYIGLETA ASLCSLGMNVTVLEATERVLERVTAPEVSAFYTRIHNGEGVEIRTHALVEAFSGNGRVQEVVLAGGEPIPADLVIVGVGV VPNTELASAAGLSVDNGIVIDDQARTSDPDIVAAGDCTSHTMARYGSRIRLESVSSAGEQAKIAAATICGKHSAIAALPW FWSDQYDLKLQIAGLNTGYDEVVFSGDPSRDRDFSCFYFRDRELIAADCVNRPRDFMFSKRAISQQLRVDRSELLAGSI
Sequences:
>Translated_399_residues MTPERAVIVGASHAGAQLAANLRREGWSGEVVLIGDEGGLPYHRPPLSKGYLAGKNGLDDLLIRGADFYEKQHIRLLNAT VEAIHRSAKRVSLSTGDTLTYTKLALCTGARARRLPTPGVDLPGIHYLRTAADVELIRAAATPGRRVVIVGGGYIGLETA ASLCSLGMNVTVLEATERVLERVTAPEVSAFYTRIHNGEGVEIRTHALVEAFSGNGRVQEVVLAGGEPIPADLVIVGVGV VPNTELASAAGLSVDNGIVIDDQARTSDPDIVAAGDCTSHTMARYGSRIRLESVSSAGEQAKIAAATICGKHSAIAALPW FWSDQYDLKLQIAGLNTGYDEVVFSGDPSRDRDFSCFYFRDRELIAADCVNRPRDFMFSKRAISQQLRVDRSELLAGSI >Mature_398_residues TPERAVIVGASHAGAQLAANLRREGWSGEVVLIGDEGGLPYHRPPLSKGYLAGKNGLDDLLIRGADFYEKQHIRLLNATV EAIHRSAKRVSLSTGDTLTYTKLALCTGARARRLPTPGVDLPGIHYLRTAADVELIRAAATPGRRVVIVGGGYIGLETAA SLCSLGMNVTVLEATERVLERVTAPEVSAFYTRIHNGEGVEIRTHALVEAFSGNGRVQEVVLAGGEPIPADLVIVGVGVV PNTELASAAGLSVDNGIVIDDQARTSDPDIVAAGDCTSHTMARYGSRIRLESVSSAGEQAKIAAATICGKHSAIAALPWF WSDQYDLKLQIAGLNTGYDEVVFSGDPSRDRDFSCFYFRDRELIAADCVNRPRDFMFSKRAISQQLRVDRSELLAGSI
Specific function: The oxidation of camphor by cytochrome P450-CAM requires the participation of a flavoprotein, putidaredoxin reductase, and an iron-sulfur protein, putidaredoxin, to mediate the transfer of electrons from NADH to P450 for oxygen activation [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI65787454, Length=371, Percent_Identity=29.9191374663073, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI21389617, Length=371, Percent_Identity=29.9191374663073, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI226437568, Length=371, Percent_Identity=29.9191374663073, Blast_Score=165, Evalue=8e-41, Organism=Homo sapiens, GI4757732, Length=333, Percent_Identity=24.3243243243243, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI22202629, Length=333, Percent_Identity=24.3243243243243, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1788892, Length=402, Percent_Identity=36.0696517412935, Blast_Score=178, Evalue=5e-46, Organism=Escherichia coli, GI1789065, Length=272, Percent_Identity=31.25, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1789765, Length=345, Percent_Identity=27.8260869565217, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17559934, Length=364, Percent_Identity=31.043956043956, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI32564386, Length=409, Percent_Identity=24.9388753056235, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24639257, Length=367, Percent_Identity=29.1553133514986, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI281359715, Length=367, Percent_Identity=29.1553133514986, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI281359713, Length=367, Percent_Identity=29.1553133514986, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI24639250, Length=367, Percent_Identity=29.1553133514986, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI18543267, Length=367, Percent_Identity=29.1553133514986, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI24639252, Length=367, Percent_Identity=29.1553133514986, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI24585130, Length=367, Percent_Identity=24.2506811989101, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24581020, Length=356, Percent_Identity=23.876404494382, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI28573993, Length=356, Percent_Identity=23.876404494382, Blast_Score=82, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.18.1.3 [C]
Molecular weight: Translated: 42708; Mature: 42577
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPERAVIVGASHAGAQLAANLRREGWSGEVVLIGDEGGLPYHRPPLSKGYLAGKNGLDD CCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCHHH LLIRGADFYEKQHIRLLNATVEAIHRSAKRVSLSTGDTLTYTKLALCTGARARRLPTPGV HHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEHHHHHHHCCCHHCCCCCCCC DLPGIHYLRTAADVELIRAAATPGRRVVIVGGGYIGLETAASLCSLGMNVTVLEATERVL CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEECHHHHHHHHHCCCCEEEEHHHHHHH ERVTAPEVSAFYTRIHNGEGVEIRTHALVEAFSGNGRVQEVVLAGGEPIPADLVIVGVGV HHHCCCCHHHHHHHHCCCCCCEEEHHEEHHHHCCCCCEEEEEEECCCCCCCCEEEEEECC VPNTELASAAGLSVDNGIVIDDQARTSDPDIVAAGDCTSHTMARYGSRIRLESVSSAGEQ CCCCCHHHHCCCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHCCCEEEEEHHHCCCCC AKIAAATICGKHSAIAALPWFWSDQYDLKLQIAGLNTGYDEVVFSGDPSRDRDFSCFYFR CEEEEEECCCCCCCEEEECEEECCCEEEEEEEEECCCCCCCEEECCCCCCCCCEEEEEEE DRELIAADCVNRPRDFMFSKRAISQQLRVDRSELLAGSI CCCCHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCCCC >Mature Secondary Structure TPERAVIVGASHAGAQLAANLRREGWSGEVVLIGDEGGLPYHRPPLSKGYLAGKNGLDD CCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCHHH LLIRGADFYEKQHIRLLNATVEAIHRSAKRVSLSTGDTLTYTKLALCTGARARRLPTPGV HHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEHHHHHHHCCCHHCCCCCCCC DLPGIHYLRTAADVELIRAAATPGRRVVIVGGGYIGLETAASLCSLGMNVTVLEATERVL CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEECHHHHHHHHHCCCCEEEEHHHHHHH ERVTAPEVSAFYTRIHNGEGVEIRTHALVEAFSGNGRVQEVVLAGGEPIPADLVIVGVGV HHHCCCCHHHHHHHHCCCCCCEEEHHEEHHHHCCCCCEEEEEEECCCCCCCCEEEEEECC VPNTELASAAGLSVDNGIVIDDQARTSDPDIVAAGDCTSHTMARYGSRIRLESVSSAGEQ CCCCCHHHHCCCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHCCCEEEEEHHHCCCCC AKIAAATICGKHSAIAALPWFWSDQYDLKLQIAGLNTGYDEVVFSGDPSRDRDFSCFYFR CEEEEEECCCCCCCEEEECEEECCCEEEEEEEEECCCCCCCEEECCCCCCCCCEEEEEEE DRELIAADCVNRPRDFMFSKRAISQQLRVDRSELLAGSI CCCCHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Reduced Ferredoxin; NAD(+); 3-phenylpropionate; NADH; Proton; O2 [C]
Specific reaction: Reduced Ferredoxin + NAD(+) = Oxidized Ferredoxin + NADH. 3-phenylpropionate + NADH + Proton + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2180940; 2613690; 3003058; 12011076; 11524002 [H]