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The map label for this gene is ybcJ [C]

Identifier: 119869188

GI number: 119869188

Start: 3303351

End: 3303569

Strand: Direct

Name: ybcJ [C]

Synonym: Mkms_3156

Alternate gene names: 119869188

Gene position: 3303351-3303569 (Clockwise)

Preceding gene: 119869186

Following gene: 119869191

Centisome position: 57.58

GC content: 68.95

Gene sequence:

>219_bases
ATGGCGGCGCACGAGGTTCCGATCGGTGACGACACGATCCGTCTCGGTCAGTTCCTCAAACTCGCCTCGCTGATCGACAG
CGGAGCGGATGCCAAATCGGTGATCGCCGACGGGGCGGTCACGGTCAACGGCGAGGTGGAACTGCGCCGGGGCCGCCAAC
TCCACCCCGGCGACACCGTGACCCTGGGCGGGGAGTCCGCGCGCGTCACCCGCGGATGA

Upstream 100 bases:

>100_bases
GGGTCAACTGCTCGACCGACGCGAAGAACGCGTCCATGTCCAGGTGCAGGACCCAGCGCACGTCCACACCCGCAGATGCT
AGGGCGTTAGCCTGAGCGTC

Downstream 100 bases:

>100_bases
CAGCCTGCTCTCCGGCGCGGGGCAGGATCCGGACCGCGTCGGCGGTCAGTGTCTCCTCGCACTGATCGCAGGCCAGTTCC
GGGACGAAACGCTGTCCGCA

Product: RNA-binding S4 domain-containing protein

Products: NA

Alternate protein names: S4 Domain Protein YaaA; Pseudouridylate Synthase; S4 Domain Protein

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MAAHEVPIGDDTIRLGQFLKLASLIDSGADAKSVIADGAVTVNGEVELRRGRQLHPGDTVTLGGESARVTRG

Sequences:

>Translated_72_residues
MAAHEVPIGDDTIRLGQFLKLASLIDSGADAKSVIADGAVTVNGEVELRRGRQLHPGDTVTLGGESARVTRG
>Mature_71_residues
AAHEVPIGDDTIRLGQFLKLASLIDSGADAKSVIADGAVTVNGEVELRRGRQLHPGDTVTLGGESARVTRG

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7468; Mature: 7336

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAHEVPIGDDTIRLGQFLKLASLIDSGADAKSVIADGAVTVNGEVELRRGRQLHPGDTV
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCEEEECCEEEECCCCCCCCCCEE
TLGGESARVTRG
EECCCCCEEECC
>Mature Secondary Structure 
AAHEVPIGDDTIRLGQFLKLASLIDSGADAKSVIADGAVTVNGEVELRRGRQLHPGDTV
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCEEEECCEEEECCCCCCCCCCEE
TLGGESARVTRG
EECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA