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The map label for this gene is pobB [H]

Identifier: 119868951

GI number: 119868951

Start: 3059519

End: 3060625

Strand: Direct

Name: pobB [H]

Synonym: Mkms_2919

Alternate gene names: 119868951

Gene position: 3059519-3060625 (Clockwise)

Preceding gene: 119868950

Following gene: 119868953

Centisome position: 53.33

GC content: 72.45

Gene sequence:

>1107_bases
ATGCCGCTGCTCGACCGGTTCCGGCAGGCGCCCCCGAGCGCGTTCGGCCGGTTGCGCCACGACGTGTCGATCGGCGTCGC
CGACGCCGCCATCTCCGCGCTGTGGGCCCTGTCGGGCCGCGTCCGCGACATCTCCGAACCGCGGCCGCGAGAACACCTGA
TCACCTTGACCGTCACCGACCGCCGCATGGTCGCCCACGACGAGGACGTCGTCGCGCTCACGTTCACCGCGTCCGACGGC
GCCACACTGCCGCCCTGGCACCCCGGGGCACACCTCGACCTGCACCTGCCCAGCGGGCGCATCCGGCAGTACTCGCTGTG
CGGGGACCCCTCGGTGCGGGACAGCTATCGCATCGCCGTCCGGCGCATCGCCGACGGCGGTGGCGGTTCGGTCGAGGTGC
ACGAAAAACTGCACCCGGGCGTGGCCGTGGGAACGTTGGGCCCCCGCAACGCCTTTCCGCTCACACTGCCCGGGTACGGA
TCCCCGGCCCGACTGCTGCACTTCGTCGCCGGAGGTATCGGCATCACCCCGATCCTGCCGATGCTCGCGCTCGCGCAGCG
GTTCGAGGTGCCGTGGACGATGTCCTACGCCGGGCGCAGCCGTGCCAGCCTGCCCTTCCTCGACGAAGTGGCCGCCTACG
GCGAACGGGTGCGCCTCCACACCGACGACGTCGCAGGTGTGCCCGCAGCCGGCGATCTGCTCGGCGAGTGCCCGGACGGC
ACAACGGTGTACGCGTGCGGGCCGGCGCCGATGCTGACCGCCGTGCGGTCGGCACTCGCCGGGCGCGCCGGGGTCGAACT
GCATTTCGAGCGGTTCGCCGCACCGCCCGTCGTCGACGGCGCACCTTTCTCCGTGTCGATCACCTCGACGGGTGCGGTGG
TGCCGGTGGCCGCGGACGAAACCCTGCTCAGCGCCCTCGACAGGTCGGGTGTGCACGCCGCCTACTCGTGCAGGCAGGGG
TTCTGCGGCACCTGCCGGACCCGGGTGCTCGCCGGCACGGTCGACCACCGCGACACACTGCTCACCGAGCCGGAACGCGC
AGGCGGGATGATGCTGACCTGCGTGTCGCGCGCCCCGGCGGGGCAGCGACTGACGCTGGACCTGTAG

Upstream 100 bases:

>100_bases
TGTACTTCAGGCCGGGATTCTCACCCGAGGAGATGGGATCGACGGCGCAGGCGGTCGCCTACCTGGCCAGCTCCCCGGCG
GCGCGGGCCGCGCACCTCTG

Downstream 100 bases:

>100_bases
CCGCTAGGCGTGTTCGGTGAACGGCCACCACAGGCCGTCGCTGCCGCGGACGCCGTACGGCGTGTCCATGGCGGCGGTGA
TCTCCTCGATCTCGTTGTCC

Product: ferredoxin

Products: NA

Alternate protein names: 4-carboxydiphenyl ether; phenoxybenzoate dioxygenase subunit beta [H]

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MPLLDRFRQAPPSAFGRLRHDVSIGVADAAISALWALSGRVRDISEPRPREHLITLTVTDRRMVAHDEDVVALTFTASDG
ATLPPWHPGAHLDLHLPSGRIRQYSLCGDPSVRDSYRIAVRRIADGGGGSVEVHEKLHPGVAVGTLGPRNAFPLTLPGYG
SPARLLHFVAGGIGITPILPMLALAQRFEVPWTMSYAGRSRASLPFLDEVAAYGERVRLHTDDVAGVPAAGDLLGECPDG
TTVYACGPAPMLTAVRSALAGRAGVELHFERFAAPPVVDGAPFSVSITSTGAVVPVAADETLLSALDRSGVHAAYSCRQG
FCGTCRTRVLAGTVDHRDTLLTEPERAGGMMLTCVSRAPAGQRLTLDL

Sequences:

>Translated_368_residues
MPLLDRFRQAPPSAFGRLRHDVSIGVADAAISALWALSGRVRDISEPRPREHLITLTVTDRRMVAHDEDVVALTFTASDG
ATLPPWHPGAHLDLHLPSGRIRQYSLCGDPSVRDSYRIAVRRIADGGGGSVEVHEKLHPGVAVGTLGPRNAFPLTLPGYG
SPARLLHFVAGGIGITPILPMLALAQRFEVPWTMSYAGRSRASLPFLDEVAAYGERVRLHTDDVAGVPAAGDLLGECPDG
TTVYACGPAPMLTAVRSALAGRAGVELHFERFAAPPVVDGAPFSVSITSTGAVVPVAADETLLSALDRSGVHAAYSCRQG
FCGTCRTRVLAGTVDHRDTLLTEPERAGGMMLTCVSRAPAGQRLTLDL
>Mature_367_residues
PLLDRFRQAPPSAFGRLRHDVSIGVADAAISALWALSGRVRDISEPRPREHLITLTVTDRRMVAHDEDVVALTFTASDGA
TLPPWHPGAHLDLHLPSGRIRQYSLCGDPSVRDSYRIAVRRIADGGGGSVEVHEKLHPGVAVGTLGPRNAFPLTLPGYGS
PARLLHFVAGGIGITPILPMLALAQRFEVPWTMSYAGRSRASLPFLDEVAAYGERVRLHTDDVAGVPAAGDLLGECPDGT
TVYACGPAPMLTAVRSALAGRAGVELHFERFAAPPVVDGAPFSVSITSTGAVVPVAADETLLSALDRSGVHAAYSCRQGF
CGTCRTRVLAGTVDHRDTLLTEPERAGGMMLTCVSRAPAGQRLTLDL

Specific function: Degrades exclusively diarylether compounds having carboxyl groups in the 3- or 4-position. Yields a hemiacetal that spontaneously hydrolyzes to phenol and protocatechuate [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788104, Length=310, Percent_Identity=36.1290322580645, Blast_Score=167, Evalue=8e-43,
Organism=Escherichia coli, GI1787658, Length=314, Percent_Identity=29.2993630573248, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787098, Length=270, Percent_Identity=28.1481481481481, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38979; Mature: 38848

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLDRFRQAPPSAFGRLRHDVSIGVADAAISALWALSGRVRDISEPRPREHLITLTVTD
CCHHHHHHCCCHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEC
RRMVAHDEDVVALTFTASDGATLPPWHPGAHLDLHLPSGRIRQYSLCGDPSVRDSYRIAV
CEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCHHEEEE
RRIADGGGGSVEVHEKLHPGVAVGTLGPRNAFPLTLPGYGSPARLLHFVAGGIGITPILP
EEECCCCCCEEEEHHHCCCCEEEECCCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHH
MLALAQRFEVPWTMSYAGRSRASLPFLDEVAAYGERVRLHTDDVAGVPAAGDLLGECPDG
HHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCCC
TTVYACGPAPMLTAVRSALAGRAGVELHFERFAAPPVVDGAPFSVSITSTGAVVPVAADE
CEEEEECCHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCCEEEEECCCEEEEEECCH
TLLSALDRSGVHAAYSCRQGFCGTCRTRVLAGTVDHRDTLLTEPERAGGMMLTCVSRAPA
HHHHHHHHCCCHHHHHHCCCCCHHHHHHHEECCCCCCCHHCCCCHHHCCEEEEEECCCCC
GQRLTLDL
CCEEEEEC
>Mature Secondary Structure 
PLLDRFRQAPPSAFGRLRHDVSIGVADAAISALWALSGRVRDISEPRPREHLITLTVTD
CHHHHHHCCCHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEC
RRMVAHDEDVVALTFTASDGATLPPWHPGAHLDLHLPSGRIRQYSLCGDPSVRDSYRIAV
CEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCHHEEEE
RRIADGGGGSVEVHEKLHPGVAVGTLGPRNAFPLTLPGYGSPARLLHFVAGGIGITPILP
EEECCCCCCEEEEHHHCCCCEEEECCCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHH
MLALAQRFEVPWTMSYAGRSRASLPFLDEVAAYGERVRLHTDDVAGVPAAGDLLGECPDG
HHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCCC
TTVYACGPAPMLTAVRSALAGRAGVELHFERFAAPPVVDGAPFSVSITSTGAVVPVAADE
CEEEEECCHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCCEEEEECCCEEEEEECCH
TLLSALDRSGVHAAYSCRQGFCGTCRTRVLAGTVDHRDTLLTEPERAGGMMLTCVSRAPA
HHHHHHHHCCCHHHHHHCCCCCHHHHHHHEECCCCCCCHHCCCCHHHCCEEEEEECCCCC
GQRLTLDL
CCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7710319 [H]