| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is emrE [C]
Identifier: 119868942
GI number: 119868942
Start: 3051822
End: 3052166
Strand: Direct
Name: emrE [C]
Synonym: Mkms_2910
Alternate gene names: 119868942
Gene position: 3051822-3052166 (Clockwise)
Preceding gene: 119868935
Following gene: 119868943
Centisome position: 53.19
GC content: 70.72
Gene sequence:
>345_bases GTGCGAAGATCAGTGCTGTTGATCGCAGCCATCGCCACCGAGGTCACCGCCACCCTGGCGCTGCGGGCATCCCACGATGA TTCGTGGTGGCTGATCGTCGTGGTCGCCGGATATCTCGGGGCGTTCCTGCTCCTCACCGCGGTGCTGCGGGCCGGGATGG CCGTCGGCGTCGCCTACGGGATCTGGGGGGCATCGGGCACCGCGGCGACCGCGATCCTGGCCGCGGGCATCTTCGGCGAT CCGTTCACCTGGCCCATTGCCGCCGGCATCGCGCTGATCGTCGGCGGGGTGCTGTTGGTCGAATTCGGCTCGCGCCCGCG GCCGGAACCCGGTGGCGCGCGGTGA
Upstream 100 bases:
>100_bases GGGCCTGATGCACCGGTTGATTCGGTCGTCACGAGCAGCACCTCCCTGCGGTAAGCATCGACCCGACCAGGCTACTCACG CAGTCGGTTAGGTTGGCGCG
Downstream 100 bases:
>100_bases TGTACCTCGCACTTGCCGCGGCCATCGCGCTGGAGGTGCTCGCGACGCTGTGCCTGCGGGCGTCCGACGGCTTCCGCAAG AAGGTGTGGATGGCGCCGGT
Product: small multidrug resistance protein
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Multidrug Efflux Transporter; Multidrug Resistance Membrane Protein; Integral Membrane Efflux Protein; Small Multidrug Resistance Protein SMR Family; Transporter Small Multidrug Resistance Family Protein; Cation/Cationic Drug Transporter
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MRRSVLLIAAIATEVTATLALRASHDDSWWLIVVVAGYLGAFLLLTAVLRAGMAVGVAYGIWGASGTAATAILAAGIFGD PFTWPIAAGIALIVGGVLLVEFGSRPRPEPGGAR
Sequences:
>Translated_114_residues MRRSVLLIAAIATEVTATLALRASHDDSWWLIVVVAGYLGAFLLLTAVLRAGMAVGVAYGIWGASGTAATAILAAGIFGD PFTWPIAAGIALIVGGVLLVEFGSRPRPEPGGAR >Mature_114_residues MRRSVLLIAAIATEVTATLALRASHDDSWWLIVVVAGYLGAFLLLTAVLRAGMAVGVAYGIWGASGTAATAILAAGIFGD PFTWPIAAGIALIVGGVLLVEFGSRPRPEPGGAR
Specific function: Multidrug Transporter. Confers Resistance To A Wide Range Of Toxic Compounds By Removing Them For The Cells. The Efflux Is Coupled To An Influx Of Protons. Probably Prevents The Incorporation Of Methyl VIologen Into Cells. Involved In Ethidium Bromide Ef
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11645; Mature: 11645
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSVLLIAAIATEVTATLALRASHDDSWWLIVVVAGYLGAFLLLTAVLRAGMAVGVAYG CCCHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWGASGTAATAILAAGIFGDPFTWPIAAGIALIVGGVLLVEFGSRPRPEPGGAR CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRRSVLLIAAIATEVTATLALRASHDDSWWLIVVVAGYLGAFLLLTAVLRAGMAVGVAYG CCCHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWGASGTAATAILAAGIFGDPFTWPIAAGIALIVGGVLLVEFGSRPRPEPGGAR CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA