| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119868894
Identifier: 119868894
GI number: 119868894
Start: 2983739
End: 2985796
Strand: Direct
Name: 119868894
Synonym: Mkms_2862
Alternate gene names: NA
Gene position: 2983739-2985796 (Clockwise)
Preceding gene: 119868893
Following gene: 119868895
Centisome position: 52.01
GC content: 70.65
Gene sequence:
>2058_bases ATGGGTAGGCACAGCATTCCCGATCCTGAGGACTCCGACGACGACGCCGGCGTCCCCGACGACAGGATCGACGACGGCGG ATACGGCTCCGACGACGGCCCGTCGGGTCGGCACAGTGGCGAGTTCCCGGCACAGCCCGAGGGTGCGGATGCACGCCAGG GCGACTACACCACCGACGAGTACGCCGACGGCGACTATGCCGACAGTGAGTATGCCGACGAGTACGCCGACGAGTACGCC GACGACCATCCGGTCACCGCGGGGGCCCAGCCACCCGCCGAACCGTCCGGACCCGCGCACGGCGGCACCTGGGACGGCGG CGAGTGGACCGGCAGCCACCGGGCGGTGACGCCCGGACGGCGCGGCCTCAGCATCGGGGTCATCGCCGCGCTCGTCACGG TCGTCGTCGTGGTCGGCGGGGTCATCCTGTGGCGCTTCTTCGGTGACGCCCTCTCCGAACGCAGCGACGCCGCATCGGCG CGGTGCGTCGACGGCAACCTCGACGTCGCCGTGCTGGCCGACCCGTCGATCGCGGAGACGATCGGCGGACTGGCCGACCA GTACAACGAGAACGCCGCCCCGGTGGGTGACCGCTGTGTGAAGGTGGGCGTCAAACCGGCCGGTTCCGAGCAGGTCATCA ACGGCTTCGGCGACACCTGGCCCGGTGACCTCGGCGAGCGTCCGGCGCTGTGGATTCCCGCGAGCGGTGTCTCGGCGGCC CGGCTCGAGGCCGCGACGGACCAGAAGACGGTCAGCGATTCACGCACCCTGGTCAGCACACCGGTCGTTCTGGCGGTGCG GCCCGAGCTCAAACCCGCCCTGGCGCAGCAGAACTGGGGCACCCTGCCCGATCTGCAGACCAACCCGACAGCGCTCGACG GACTCGGCCTGCCCGGGTGGGGCGCGCTGAAGCTCGCGCTGCCACGCAGCGGCAACGCCGACGCGTCGTATCTGGCGGCC GAGGCCGTCGCCGCCGCGGCGAGCCCCGACGGCGCACCCGTGACCGACGGGATCAGCGCGATCAACACCCTGTCCGCCGG CGCACCCGAACTGCCCGCCGATACCGCCGACGCCGCCATGAAGGCGCTGCTGACCTCCGGAGATCCGGCGAAGGCGCCGG TGCACGCCGTCGCCACGACCGAACAGCAAGTGGTGGCACGTGCCGCCTCGTCGCCCGATGCGAAATCCGAACTCGCCTCG TGGCTGCCGCCGGGTCCGGTGGCGACCGCCGACTACCCGACCGTGCTGCTGTCGGGCGACTGGCTCTCACGTGAACAGGT CACTGCGGCCAGCCAGTTCGCCCGGTTCATGCGTGAGCCCGATCGCATGAACGAACTCGCCAAGGCCGGGTTCCGCACCC AGGGCGGCACACCCCCGCCGAGCGACGTCACCGACTTCCCGAAGCTGGCGGCGCCGTTGTCGGTCGGCGACGATGCGGCA CGGGTGAAACTGGCCGAGGCCCTGACCTCACCGGCGCAGGCCTCCACGACCACGATCATGCTCGATCTGTCCATGCCCGG CGCGGAAGGCGACAACACGAGGATGGGCAACGTCGTCAACGCGCTGATCCCCCGGGTCGACGCGCTTCCGCCGACGACGG CACTGGGTCTGTGGACGTTCGACGCCGCCGCGGGCAACTCGCAGATCACCACCGGTCCGCTGTCCGAACCGGTCGACGGT CAACCGCGGTCCGCCGCGTTGACCACGACACTCGACACGCTCTCGTCGACCTCCGGCGGCGCGGTGTCGTTCACCACGCT GCGTCTGGTCTACAACGAGGCGATGGCCAACTTCCGTGCGGGACAACCCAATTCGGTGCTGGTGATCACCCAGGGTCCGC ACACCGACCGGACACTCGACGGTGCGGGACTCGAAGCGTTCATCCGCGACGCGTTCGATCCGGCCCGGCCGGTGGCCGTC AACGTCATCGACTTCGGTGACGACCCCGACCGGGGGACGTGGGAGACCGTCGCGCGGACGACCGGGGGCCAGTACCAGAA CCTCGCCACGTCGGATTCACCCGAACTCACGGCGGCGATCACCACGCTGCTGCGGTGA
Upstream 100 bases:
>100_bases TCCTGGCGGACGACTAGACTGCCCGGGGCGCGGACGAAAGCGGCGATGACCCAGCGATGATCAAGCGACGACGCGAACAC GGGGACCGGAATGGGTAGGC
Downstream 100 bases:
>100_bases TCGGTTCTTGGTATCGCAAGTAGTCGCTGAGTAAGACCGCGCAATGCCCGCCGAGGTGCGGAACGCCTGTGTTAGATACG GACCATGGCGGGGCAGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 685; Mature: 684
Protein sequence:
>685_residues MGRHSIPDPEDSDDDAGVPDDRIDDGGYGSDDGPSGRHSGEFPAQPEGADARQGDYTTDEYADGDYADSEYADEYADEYA DDHPVTAGAQPPAEPSGPAHGGTWDGGEWTGSHRAVTPGRRGLSIGVIAALVTVVVVVGGVILWRFFGDALSERSDAASA RCVDGNLDVAVLADPSIAETIGGLADQYNENAAPVGDRCVKVGVKPAGSEQVINGFGDTWPGDLGERPALWIPASGVSAA RLEAATDQKTVSDSRTLVSTPVVLAVRPELKPALAQQNWGTLPDLQTNPTALDGLGLPGWGALKLALPRSGNADASYLAA EAVAAAASPDGAPVTDGISAINTLSAGAPELPADTADAAMKALLTSGDPAKAPVHAVATTEQQVVARAASSPDAKSELAS WLPPGPVATADYPTVLLSGDWLSREQVTAASQFARFMREPDRMNELAKAGFRTQGGTPPPSDVTDFPKLAAPLSVGDDAA RVKLAEALTSPAQASTTTIMLDLSMPGAEGDNTRMGNVVNALIPRVDALPPTTALGLWTFDAAAGNSQITTGPLSEPVDG QPRSAALTTTLDTLSSTSGGAVSFTTLRLVYNEAMANFRAGQPNSVLVITQGPHTDRTLDGAGLEAFIRDAFDPARPVAV NVIDFGDDPDRGTWETVARTTGGQYQNLATSDSPELTAAITTLLR
Sequences:
>Translated_685_residues MGRHSIPDPEDSDDDAGVPDDRIDDGGYGSDDGPSGRHSGEFPAQPEGADARQGDYTTDEYADGDYADSEYADEYADEYA DDHPVTAGAQPPAEPSGPAHGGTWDGGEWTGSHRAVTPGRRGLSIGVIAALVTVVVVVGGVILWRFFGDALSERSDAASA RCVDGNLDVAVLADPSIAETIGGLADQYNENAAPVGDRCVKVGVKPAGSEQVINGFGDTWPGDLGERPALWIPASGVSAA RLEAATDQKTVSDSRTLVSTPVVLAVRPELKPALAQQNWGTLPDLQTNPTALDGLGLPGWGALKLALPRSGNADASYLAA EAVAAAASPDGAPVTDGISAINTLSAGAPELPADTADAAMKALLTSGDPAKAPVHAVATTEQQVVARAASSPDAKSELAS WLPPGPVATADYPTVLLSGDWLSREQVTAASQFARFMREPDRMNELAKAGFRTQGGTPPPSDVTDFPKLAAPLSVGDDAA RVKLAEALTSPAQASTTTIMLDLSMPGAEGDNTRMGNVVNALIPRVDALPPTTALGLWTFDAAAGNSQITTGPLSEPVDG QPRSAALTTTLDTLSSTSGGAVSFTTLRLVYNEAMANFRAGQPNSVLVITQGPHTDRTLDGAGLEAFIRDAFDPARPVAV NVIDFGDDPDRGTWETVARTTGGQYQNLATSDSPELTAAITTLLR >Mature_684_residues GRHSIPDPEDSDDDAGVPDDRIDDGGYGSDDGPSGRHSGEFPAQPEGADARQGDYTTDEYADGDYADSEYADEYADEYAD DHPVTAGAQPPAEPSGPAHGGTWDGGEWTGSHRAVTPGRRGLSIGVIAALVTVVVVVGGVILWRFFGDALSERSDAASAR CVDGNLDVAVLADPSIAETIGGLADQYNENAAPVGDRCVKVGVKPAGSEQVINGFGDTWPGDLGERPALWIPASGVSAAR LEAATDQKTVSDSRTLVSTPVVLAVRPELKPALAQQNWGTLPDLQTNPTALDGLGLPGWGALKLALPRSGNADASYLAAE AVAAAASPDGAPVTDGISAINTLSAGAPELPADTADAAMKALLTSGDPAKAPVHAVATTEQQVVARAASSPDAKSELASW LPPGPVATADYPTVLLSGDWLSREQVTAASQFARFMREPDRMNELAKAGFRTQGGTPPPSDVTDFPKLAAPLSVGDDAAR VKLAEALTSPAQASTTTIMLDLSMPGAEGDNTRMGNVVNALIPRVDALPPTTALGLWTFDAAAGNSQITTGPLSEPVDGQ PRSAALTTTLDTLSSTSGGAVSFTTLRLVYNEAMANFRAGQPNSVLVITQGPHTDRTLDGAGLEAFIRDAFDPARPVAVN VIDFGDDPDRGTWETVARTTGGQYQNLATSDSPELTAAITTLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70630; Mature: 70499
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRHSIPDPEDSDDDAGVPDDRIDDGGYGSDDGPSGRHSGEFPAQPEGADARQGDYTTDE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YADGDYADSEYADEYADEYADDHPVTAGAQPPAEPSGPAHGGTWDGGEWTGSHRAVTPGR CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGLSIGVIAALVTVVVVVGGVILWRFFGDALSERSDAASARCVDGNLDVAVLADPSIAET CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCHHHHH IGGLADQYNENAAPVGDRCVKVGVKPAGSEQVINGFGDTWPGDLGERPALWIPASGVSAA HHHHHHHHCCCCCCCCCHHEEECCCCCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCHH RLEAATDQKTVSDSRTLVSTPVVLAVRPELKPALAQQNWGTLPDLQTNPTALDGLGLPGW HHHHHCCHHHHCCCCEEEECCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GALKLALPRSGNADASYLAAEAVAAAASPDGAPVTDGISAINTLSAGAPELPADTADAAM CEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH KALLTSGDPAKAPVHAVATTEQQVVARAASSPDAKSELASWLPPGPVATADYPTVLLSGD HHHHCCCCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECC WLSREQVTAASQFARFMREPDRMNELAKAGFRTQGGTPPPSDVTDFPKLAAPLSVGDDAA CCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHH RVKLAEALTSPAQASTTTIMLDLSMPGAEGDNTRMGNVVNALIPRVDALPPTTALGLWTF HHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEE DAAAGNSQITTGPLSEPVDGQPRSAALTTTLDTLSSTSGGAVSFTTLRLVYNEAMANFRA CCCCCCCCEECCCCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCC GQPNSVLVITQGPHTDRTLDGAGLEAFIRDAFDPARPVAVNVIDFGDDPDRGTWETVART CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHC TGGQYQNLATSDSPELTAAITTLLR CCCCCCCCCCCCCCHHHHHHHHHHC >Mature Secondary Structure GRHSIPDPEDSDDDAGVPDDRIDDGGYGSDDGPSGRHSGEFPAQPEGADARQGDYTTDE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YADGDYADSEYADEYADEYADDHPVTAGAQPPAEPSGPAHGGTWDGGEWTGSHRAVTPGR CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGLSIGVIAALVTVVVVVGGVILWRFFGDALSERSDAASARCVDGNLDVAVLADPSIAET CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCHHHHH IGGLADQYNENAAPVGDRCVKVGVKPAGSEQVINGFGDTWPGDLGERPALWIPASGVSAA HHHHHHHHCCCCCCCCCHHEEECCCCCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCHH RLEAATDQKTVSDSRTLVSTPVVLAVRPELKPALAQQNWGTLPDLQTNPTALDGLGLPGW HHHHHCCHHHHCCCCEEEECCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GALKLALPRSGNADASYLAAEAVAAAASPDGAPVTDGISAINTLSAGAPELPADTADAAM CEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH KALLTSGDPAKAPVHAVATTEQQVVARAASSPDAKSELASWLPPGPVATADYPTVLLSGD HHHHCCCCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECC WLSREQVTAASQFARFMREPDRMNELAKAGFRTQGGTPPPSDVTDFPKLAAPLSVGDDAA CCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHH RVKLAEALTSPAQASTTTIMLDLSMPGAEGDNTRMGNVVNALIPRVDALPPTTALGLWTF HHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEE DAAAGNSQITTGPLSEPVDGQPRSAALTTTLDTLSSTSGGAVSFTTLRLVYNEAMANFRA CCCCCCCCEECCCCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCC GQPNSVLVITQGPHTDRTLDGAGLEAFIRDAFDPARPVAVNVIDFGDDPDRGTWETVART CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHC TGGQYQNLATSDSPELTAAITTLLR CCCCCCCCCCCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]