| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is yqjI [H]
Identifier: 119868888
GI number: 119868888
Start: 2974804
End: 2976264
Strand: Direct
Name: yqjI [H]
Synonym: Mkms_2856
Alternate gene names: 119868888
Gene position: 2974804-2976264 (Clockwise)
Preceding gene: 119868887
Following gene: 119868889
Centisome position: 51.85
GC content: 67.49
Gene sequence:
>1461_bases ATGAGCTCATCCGAGAAGTCCACCGCCGGCACCGCGCAGATCGGGGTCACCGGCCTGGCCGTGATGGGTTCGAACATCGC ACGCAACTTCGCCAGGCACGGCTACACCGTCGCCCTGCACAACCGGTCGGTGGCCAAGACCGACGCGCTGCTGGCCGAAC ACGGTTCCGAGGGCTCCTTCGTGCGGACCGAGACCATCCCGGAATTCCTGGCCGCCCTGGAGAAACCGCGCCGCGTGCTG ATCATGGTCAAGGCCGGCGAGGCGACCGATGCGGTGATCAACGAGCTCGCCGACGCGATGGAAGACGGCGACATCATCAT CGACGGCGGCAACGCGCTCTACACCGACACGATCCGCCGTGAGAAGGCGATCCGGGAACGCGGTCTGCACTTCGTCGGCG CCGGCATCTCCGGCGGCGAGGAGGGTGCGCTCAACGGGCCGTCGATCATGCCCGGCGGCCCCGCGGAGTCCTACGAGAGC CTCGGTCCGCTGCTGGAGGAGATCTCCGCGCACGTCGACGGTGTCCCGTGCTGTACGCACATCGGACCCGACGGCGCGGG CCACTTCGTGAAGATGGTGCACAACGGCATCGAGTACTCCGACATGCAGCTCATCGGCGAGGCCTACCAGCTGCTGCGCG ACGGGCTCGGCAAGTCCGCCCCCGAGATCGCCGAGGTCTTCGACGAGTGGAACCGCGGCGACCTCGACAGCTTCCTGGTC GAGATCACCGCGCAGGTGCTGCGTCAGATCGACGAGAAGACCGGCAAACCGCTCGTCGACCTCATCCTCGACGAGGCCGA GCAGAAGGGCACCGGCCGCTGGACGGTGAAGTCGGCGCTCGACCTGGGTGTGCCCGTCACCGGTATCGCCGAGGCGGTGT TCGCCCGCGCGCTGTCGGGATCGGTCGCCCAGCGCCAGGCCACCACCGGGTTGGCCTCCGGCGACCTGGGCGAAAAGCCC AGTGACGCAGAGCAGTTCACCGAGGACATCCGACAGGCCCTCTACGCGTCGAAGATCATCGCCTACGCGCAGGGCTTCAA CCAGATCCAGGCAGGCAGTGCCGAGTACGACTGGGGCATCACCCCCGGCGACATGGCCACCATCTGGCGCGGCGGCTGCA TCATCCGGGCGAAGTTCCTCAACCGCATCAAGGACGCATTCGACAACGATCCCGATCTGCCCACGCTGATCGTCGACCCG TACTTCCGCGACGCGATCGAGAACGCCATCGACAGCTGGCGCCGTGTGGTGGTCAAGGCCACCGAACTCGGCATCCCGAT CCCCGGCTTCTCGTCGGCGCTGTCGTACTACGACGGGCTGCGCACCGAACGCCTGCCCGCCGCACTCACGCAGGGGCTGC GCGACTTCTTCGGCGCCCACACCTACGGCCGCATCGACACCGACCGGGATAAGCGGTTCCACACGCTGTGGAGCGGTGAC CGCAGCGAAGTCGAGGCCTGA
Upstream 100 bases:
>100_bases GGCCGTCGCCGTGCCGTGGCTGACCGAACTGCACCGCCTGTTCATCCGCTAGGCCCATCGGAATCACCTCCCTCACAACA GAACACGAAAGGCTGCGCCC
Downstream 100 bases:
>100_bases TTTCGCCGAGACTGCGGCCAGATCGCGATTCCGCAGCGAAGCATGATCTGGCAGCAGTCCCGGGGTAACTAGACTGGCCG ACGATGAGATTCCTCGACGG
Product: 6-phosphogluconate dehydrogenase
Products: NA
Alternate protein names: GNTZII [H]
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MSSSEKSTAGTAQIGVTGLAVMGSNIARNFARHGYTVALHNRSVAKTDALLAEHGSEGSFVRTETIPEFLAALEKPRRVL IMVKAGEATDAVINELADAMEDGDIIIDGGNALYTDTIRREKAIRERGLHFVGAGISGGEEGALNGPSIMPGGPAESYES LGPLLEEISAHVDGVPCCTHIGPDGAGHFVKMVHNGIEYSDMQLIGEAYQLLRDGLGKSAPEIAEVFDEWNRGDLDSFLV EITAQVLRQIDEKTGKPLVDLILDEAEQKGTGRWTVKSALDLGVPVTGIAEAVFARALSGSVAQRQATTGLASGDLGEKP SDAEQFTEDIRQALYASKIIAYAQGFNQIQAGSAEYDWGITPGDMATIWRGGCIIRAKFLNRIKDAFDNDPDLPTLIVDP YFRDAIENAIDSWRRVVVKATELGIPIPGFSSALSYYDGLRTERLPAALTQGLRDFFGAHTYGRIDTDRDKRFHTLWSGD RSEVEA
Sequences:
>Translated_486_residues MSSSEKSTAGTAQIGVTGLAVMGSNIARNFARHGYTVALHNRSVAKTDALLAEHGSEGSFVRTETIPEFLAALEKPRRVL IMVKAGEATDAVINELADAMEDGDIIIDGGNALYTDTIRREKAIRERGLHFVGAGISGGEEGALNGPSIMPGGPAESYES LGPLLEEISAHVDGVPCCTHIGPDGAGHFVKMVHNGIEYSDMQLIGEAYQLLRDGLGKSAPEIAEVFDEWNRGDLDSFLV EITAQVLRQIDEKTGKPLVDLILDEAEQKGTGRWTVKSALDLGVPVTGIAEAVFARALSGSVAQRQATTGLASGDLGEKP SDAEQFTEDIRQALYASKIIAYAQGFNQIQAGSAEYDWGITPGDMATIWRGGCIIRAKFLNRIKDAFDNDPDLPTLIVDP YFRDAIENAIDSWRRVVVKATELGIPIPGFSSALSYYDGLRTERLPAALTQGLRDFFGAHTYGRIDTDRDKRFHTLWSGD RSEVEA >Mature_485_residues SSSEKSTAGTAQIGVTGLAVMGSNIARNFARHGYTVALHNRSVAKTDALLAEHGSEGSFVRTETIPEFLAALEKPRRVLI MVKAGEATDAVINELADAMEDGDIIIDGGNALYTDTIRREKAIRERGLHFVGAGISGGEEGALNGPSIMPGGPAESYESL GPLLEEISAHVDGVPCCTHIGPDGAGHFVKMVHNGIEYSDMQLIGEAYQLLRDGLGKSAPEIAEVFDEWNRGDLDSFLVE ITAQVLRQIDEKTGKPLVDLILDEAEQKGTGRWTVKSALDLGVPVTGIAEAVFARALSGSVAQRQATTGLASGDLGEKPS DAEQFTEDIRQALYASKIIAYAQGFNQIQAGSAEYDWGITPGDMATIWRGGCIIRAKFLNRIKDAFDNDPDLPTLIVDPY FRDAIENAIDSWRRVVVKATELGIPIPGFSSALSYYDGLRTERLPAALTQGLRDFFGAHTYGRIDTDRDKRFHTLWSGDR SEVEA
Specific function: Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH [H]
COG id: COG0362
COG function: function code G; 6-phosphogluconate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 6-phosphogluconate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI40068518, Length=470, Percent_Identity=50.2127659574468, Blast_Score=455, Evalue=1e-128, Organism=Escherichia coli, GI1788341, Length=466, Percent_Identity=51.7167381974249, Blast_Score=494, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17542558, Length=471, Percent_Identity=47.5583864118896, Blast_Score=447, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6321695, Length=475, Percent_Identity=48.6315789473684, Blast_Score=461, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6321977, Length=486, Percent_Identity=48.9711934156379, Blast_Score=452, Evalue=1e-128, Organism=Drosophila melanogaster, GI24639279, Length=479, Percent_Identity=46.7640918580376, Blast_Score=421, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR006114 - InterPro: IPR006113 - InterPro: IPR006115 - InterPro: IPR006184 - InterPro: IPR013328 - InterPro: IPR012284 - InterPro: IPR016040 - InterPro: IPR006183 [H]
Pfam domain/function: PF00393 6PGD; PF03446 NAD_binding_2 [H]
EC number: =1.1.1.44 [H]
Molecular weight: Translated: 52428; Mature: 52297
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00461 6PGD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSEKSTAGTAQIGVTGLAVMGSNIARNFARHGYTVALHNRSVAKTDALLAEHGSEGSF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCE VRTETIPEFLAALEKPRRVLIMVKAGEATDAVINELADAMEDGDIIIDGGNALYTDTIRR EEHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCEEEHHHHHH EKAIRERGLHFVGAGISGGEEGALNGPSIMPGGPAESYESLGPLLEEISAHVDGVPCCTH HHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC IGPDGAGHFVKMVHNGIEYSDMQLIGEAYQLLRDGLGKSAPEIAEVFDEWNRGDLDSFLV CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHH EITAQVLRQIDEKTGKPLVDLILDEAEQKGTGRWTVKSALDLGVPVTGIAEAVFARALSG HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHC SVAQRQATTGLASGDLGEKPSDAEQFTEDIRQALYASKIIAYAQGFNQIQAGSAEYDWGI HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC TPGDMATIWRGGCIIRAKFLNRIKDAFDNDPDLPTLIVDPYFRDAIENAIDSWRRVVVKA CCCCHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH TELGIPIPGFSSALSYYDGLRTERLPAALTQGLRDFFGAHTYGRIDTDRDKRFHTLWSGD HHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC RSEVEA HHCCCC >Mature Secondary Structure SSSEKSTAGTAQIGVTGLAVMGSNIARNFARHGYTVALHNRSVAKTDALLAEHGSEGSF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCE VRTETIPEFLAALEKPRRVLIMVKAGEATDAVINELADAMEDGDIIIDGGNALYTDTIRR EEHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCEEEHHHHHH EKAIRERGLHFVGAGISGGEEGALNGPSIMPGGPAESYESLGPLLEEISAHVDGVPCCTH HHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC IGPDGAGHFVKMVHNGIEYSDMQLIGEAYQLLRDGLGKSAPEIAEVFDEWNRGDLDSFLV CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHH EITAQVLRQIDEKTGKPLVDLILDEAEQKGTGRWTVKSALDLGVPVTGIAEAVFARALSG HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHC SVAQRQATTGLASGDLGEKPSDAEQFTEDIRQALYASKIIAYAQGFNQIQAGSAEYDWGI HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC TPGDMATIWRGGCIIRAKFLNRIKDAFDNDPDLPTLIVDPYFRDAIENAIDSWRRVVVKA CCCCHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH TELGIPIPGFSSALSYYDGLRTERLPAALTQGLRDFFGAHTYGRIDTDRDKRFHTLWSGD HHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC RSEVEA HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 10568751; 9298659 [H]