| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119868699
Identifier: 119868699
GI number: 119868699
Start: 2799374
End: 2800267
Strand: Reverse
Name: 119868699
Synonym: Mkms_2666
Alternate gene names: NA
Gene position: 2800267-2799374 (Counterclockwise)
Preceding gene: 119868700
Following gene: 119868692
Centisome position: 48.81
GC content: 66.0
Gene sequence:
>894_bases ATGGACTCCACGCTCGATCTGCGCACCGAGATCCGAGAGTTTCTGAGGTCGCGTCGGGCCCGCATCGCGCCCGAGATGAC CGGCCTGCCCGCCTACGGTGGAAGACGTCGAGTCAAGGGTCTGCGTCGAGAGGAGGTGGCGCTCCTCGCCGGGGTCTCGG TCGAGTACTACGTGCGCATCGAGCGCGGCAGCCTGGCCGGTACCTCCGACGGCGTGCTCGACGCACTAGCCACGGCCCTG CAGCTCGACGAAGCGGAGCGCGATCACCTGTTCCATCTCGCACGCCAGTCCGGGACGCCCACCGGTCGACGGCACCCCAA ACCTCCCGCGACGGTGCGCCCGGCGCTGCAAGAGGTGCTCGACGCCATCACCGGTGCGCCTGCGTTGATCCGCAATGGGC GCCACGACGTGCTCGCCATGAATGGACTTGGTCGCGCGCTGTATTCACCGGTGCTGGCCGACCCGCGACGGCCCGCCAAC ACGGCGCGGTTCGTGTACTTGCACCCCGACGAGGCCGAGGAGTTCTTCGTCGACTACGACCAGGTGGCGCGAAATGCGGC CGCGGTGCTGCGTATGGAAGTGGGCCGGAATCCTCACGACGAGGAGCTCATCGCTTTGGTCGGCGAATTATCAACGTGCA GTGAGCTGTTCCGTCAACAGTGGGCATCTCAGGACGTGCGGCTGCACGGATACGGGAGCAAGCGTGTGAACCATCCCGTG GTGGGCCGGCTCGACTTGAACTTCGAGTCCATGGATCTGCCCACCGACCCAGGCCTGCACTTGAATGTCTACACCGCGCC CGCAAGAGGTCCGGCCGCTGACAATATGGCCCTGTTGGCGTCGTGGGCCAGTCAAGAGACGCTGGCGATGGAGCTTCATG CCCCGGGCAGATGA
Upstream 100 bases:
>100_bases GCTTACCTCACGGGCGCCATCGTCCCCGTCGACGGAGGGATCGCCACGACCGCGTGATACTGCGGCGACAACGCGTGCGG TGCGGGCCTACGGTGGATGG
Downstream 100 bases:
>100_bases CTCAGCCTCCAGCCCGTCCGCGTCAGGGATCCCAATGTCTCGTCGAGCAGATCCAGCACCGCCTGCCACGCCCGTGTCGC GTGCACGGCGTGGTATTCCA
Product: helix-turn-helix domain-containing protein
Products: NA
Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Protein; Helix-Turn-Helix Domain Containing Protein; LOW QUALITY PROTEIN XRE Family Transcriptional Regulator
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MDSTLDLRTEIREFLRSRRARIAPEMTGLPAYGGRRRVKGLRREEVALLAGVSVEYYVRIERGSLAGTSDGVLDALATAL QLDEAERDHLFHLARQSGTPTGRRHPKPPATVRPALQEVLDAITGAPALIRNGRHDVLAMNGLGRALYSPVLADPRRPAN TARFVYLHPDEAEEFFVDYDQVARNAAAVLRMEVGRNPHDEELIALVGELSTCSELFRQQWASQDVRLHGYGSKRVNHPV VGRLDLNFESMDLPTDPGLHLNVYTAPARGPAADNMALLASWASQETLAMELHAPGR
Sequences:
>Translated_297_residues MDSTLDLRTEIREFLRSRRARIAPEMTGLPAYGGRRRVKGLRREEVALLAGVSVEYYVRIERGSLAGTSDGVLDALATAL QLDEAERDHLFHLARQSGTPTGRRHPKPPATVRPALQEVLDAITGAPALIRNGRHDVLAMNGLGRALYSPVLADPRRPAN TARFVYLHPDEAEEFFVDYDQVARNAAAVLRMEVGRNPHDEELIALVGELSTCSELFRQQWASQDVRLHGYGSKRVNHPV VGRLDLNFESMDLPTDPGLHLNVYTAPARGPAADNMALLASWASQETLAMELHAPGR >Mature_297_residues MDSTLDLRTEIREFLRSRRARIAPEMTGLPAYGGRRRVKGLRREEVALLAGVSVEYYVRIERGSLAGTSDGVLDALATAL QLDEAERDHLFHLARQSGTPTGRRHPKPPATVRPALQEVLDAITGAPALIRNGRHDVLAMNGLGRALYSPVLADPRRPAN TARFVYLHPDEAEEFFVDYDQVARNAAAVLRMEVGRNPHDEELIALVGELSTCSELFRQQWASQDVRLHGYGSKRVNHPV VGRLDLNFESMDLPTDPGLHLNVYTAPARGPAADNMALLASWASQETLAMELHAPGR
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32806; Mature: 32806
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSTLDLRTEIREFLRSRRARIAPEMTGLPAYGGRRRVKGLRREEVALLAGVSVEYYVRI CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCEEEEEEE ERGSLAGTSDGVLDALATALQLDEAERDHLFHLARQSGTPTGRRHPKPPATVRPALQEVL ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH DAITGAPALIRNGRHDVLAMNGLGRALYSPVLADPRRPANTARFVYLHPDEAEEFFVDYD HHHCCCHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHCCHH QVARNAAAVLRMEVGRNPHDEELIALVGELSTCSELFRQQWASQDVRLHGYGSKRVNHPV HHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCE VGRLDLNFESMDLPTDPGLHLNVYTAPARGPAADNMALLASWASQETLAMELHAPGR EEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCCC >Mature Secondary Structure MDSTLDLRTEIREFLRSRRARIAPEMTGLPAYGGRRRVKGLRREEVALLAGVSVEYYVRI CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCEEEEEEE ERGSLAGTSDGVLDALATALQLDEAERDHLFHLARQSGTPTGRRHPKPPATVRPALQEVL ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH DAITGAPALIRNGRHDVLAMNGLGRALYSPVLADPRRPANTARFVYLHPDEAEEFFVDYD HHHCCCHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHCCHH QVARNAAAVLRMEVGRNPHDEELIALVGELSTCSELFRQQWASQDVRLHGYGSKRVNHPV HHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCE VGRLDLNFESMDLPTDPGLHLNVYTAPARGPAADNMALLASWASQETLAMELHAPGR EEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA