| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119868630
Identifier: 119868630
GI number: 119868630
Start: 2729018
End: 2729674
Strand: Reverse
Name: 119868630
Synonym: Mkms_2595
Alternate gene names: NA
Gene position: 2729674-2729018 (Counterclockwise)
Preceding gene: 119868633
Following gene: 119868628
Centisome position: 47.58
GC content: 68.49
Gene sequence:
>657_bases GTGCCACAGCGAGATTCGTCCGATCAGCCGACCTCCGTCGCGGCCCGGGCCGGCCGCCGGCCTCGGGGCGAGGCGCGTCG GTTGCTGCTCGACGCCGCCCGGGATCTGTTCGCGCGCAAGGATTACCGCGCCACCACCACCCGAGAGATCGCAGAAGCCG CGGACGTCAGCGAGTACCTGCTGTTCCGCCACTTCGGCTCCAAGGCCGGGCTGTTCCGCGAAGCCCTCGTCGTACCGTTC ACGACCTTCCTCGACGACTTCGCGCAGACGTGGCAGGCCGTCGTCCCCGAGGAGACCGATGAGGAGCAGTTGGCCCGCCA GTTCGTCGGCAGGCTCTACGACGTGCTCGTCGAGCACCAGGGTCTGCTGCTCACCCTCGTCGCCTCCGACGGACTCGACG ACGAGGAGATCGAAGCCGCGGGTATCGCCGATATCCGCCGAGCGCTGAGCATGCTCGGCCGGATCAGCGCCGAAGGTATG CGATTGCGGGGGAAGCGGTCGCGTCAACCGGACCTTCCCGCACATTCGACCGTGGCGATGATCGTCGGCATGGTGGCGCT GCGCAGCACCTTCTTCGGCAGCAGCCCGCCGTCGCGAGAGGCCATCGTGGACGAACTCGTCCAGGCCATCCTGCACGGCT TCCTGCACCGCCCCTAG
Upstream 100 bases:
>100_bases GAGCATGATGACTGCGCCCATTCCAGCCCCTTCCACCGAACGATTAATAGTGGACACTATTAATATGCTCGCGGTCAAGA CCCAGCTAGGGTGAACGACG
Downstream 100 bases:
>100_bases CCACCGGGTCCGTTGGGCCACTTCAGCAGCGACCCGGCGTCGACGCGGATGTGCTGACCGGTGATGTAGCGGCTGTCGTC GGAGGCGAGGAACACGCCGA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MPQRDSSDQPTSVAARAGRRPRGEARRLLLDAARDLFARKDYRATTTREIAEAADVSEYLLFRHFGSKAGLFREALVVPF TTFLDDFAQTWQAVVPEETDEEQLARQFVGRLYDVLVEHQGLLLTLVASDGLDDEEIEAAGIADIRRALSMLGRISAEGM RLRGKRSRQPDLPAHSTVAMIVGMVALRSTFFGSSPPSREAIVDELVQAILHGFLHRP
Sequences:
>Translated_218_residues MPQRDSSDQPTSVAARAGRRPRGEARRLLLDAARDLFARKDYRATTTREIAEAADVSEYLLFRHFGSKAGLFREALVVPF TTFLDDFAQTWQAVVPEETDEEQLARQFVGRLYDVLVEHQGLLLTLVASDGLDDEEIEAAGIADIRRALSMLGRISAEGM RLRGKRSRQPDLPAHSTVAMIVGMVALRSTFFGSSPPSREAIVDELVQAILHGFLHRP >Mature_217_residues PQRDSSDQPTSVAARAGRRPRGEARRLLLDAARDLFARKDYRATTTREIAEAADVSEYLLFRHFGSKAGLFREALVVPFT TFLDDFAQTWQAVVPEETDEEQLARQFVGRLYDVLVEHQGLLLTLVASDGLDDEEIEAAGIADIRRALSMLGRISAEGMR LRGKRSRQPDLPAHSTVAMIVGMVALRSTFFGSSPPSREAIVDELVQAILHGFLHRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24246; Mature: 24115
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQRDSSDQPTSVAARAGRRPRGEARRLLLDAARDLFARKDYRATTTREIAEAADVSEYL CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LFRHFGSKAGLFREALVVPFTTFLDDFAQTWQAVVPEETDEEQLARQFVGRLYDVLVEHQ HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC GLLLTLVASDGLDDEEIEAAGIADIRRALSMLGRISAEGMRLRGKRSRQPDLPAHSTVAM CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHH IVGMVALRSTFFGSSPPSREAIVDELVQAILHGFLHRP HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PQRDSSDQPTSVAARAGRRPRGEARRLLLDAARDLFARKDYRATTTREIAEAADVSEYL CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LFRHFGSKAGLFREALVVPFTTFLDDFAQTWQAVVPEETDEEQLARQFVGRLYDVLVEHQ HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC GLLLTLVASDGLDDEEIEAAGIADIRRALSMLGRISAEGMRLRGKRSRQPDLPAHSTVAM CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHH IVGMVALRSTFFGSSPPSREAIVDELVQAILHGFLHRP HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA