| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119868482
Identifier: 119868482
GI number: 119868482
Start: 2566528
End: 2567100
Strand: Reverse
Name: 119868482
Synonym: Mkms_2446
Alternate gene names: NA
Gene position: 2567100-2566528 (Counterclockwise)
Preceding gene: 119868490
Following gene: 119868477
Centisome position: 44.74
GC content: 70.68
Gene sequence:
>573_bases ATGCCGGTGCGCAAGAGCTCCGAGGACAGACTGCTCGATGCGGTCGACGACCTGGTGTTCTCGCGCGGAATCGAATCGAC TCCGGTGGATGCGGTGCTCGCCCGGGCCGGCGTGTCGGCGGCCACGCTGTACCGCGGCTTCCGCAGCAAGGAGGCGTTGA TCGCGGCCGCCCTCGAACGTCGCCACGAGCGGTGGCGGGTGGTGTGGGAACGGGCGATCGCCGCCGCCACCGATGACGAG GAACGCCTGCTCGCGGTGTTCGACGCGGTCGACGCCTTCGCCCGGCGACCGGACGGCGCGCGGTGGTGCGCCTTCCTCGG CACCGCCGCGGAGTACGCCGACCCGCCCGCGGAGATCGCCGACGCCGTCGCACGCGATACGGACTATCTACGGGAACGGT TGCGCGAGTTGGCTTCTCAGCTTCCGTGCGGCGATCCGGACGGTCTGGCCGAAGCGATCCTTGTGGTGCTCACCGGGGAA CTCGCGATGAGGTTGCGCGACGCGCGCCGCCGCCGGTCGACGGTCGGCCGCCAGATCGGCAGAACCTTGATCACCACCGC CCTCGCAGGTTAG
Upstream 100 bases:
>100_bases TGGCGGCGATGAAGCTGGTGCCGAAGGCGATGACCAGGGGGTCACGCCCGCGGACAAACGAAAACGACCGTTTCACTTTC GCCAGTCTAGGCTGAGCCCC
Downstream 100 bases:
>100_bases GCGTCCTCGAGCAGATCGGGCGTGACGGCGGATTCGGTGTCCGGGATGCCGTCCTGTTTGGCCTTGCGGTCGGCCATCGA CAGCAGCCGCCGAATGCGCC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MPVRKSSEDRLLDAVDDLVFSRGIESTPVDAVLARAGVSAATLYRGFRSKEALIAAALERRHERWRVVWERAIAAATDDE ERLLAVFDAVDAFARRPDGARWCAFLGTAAEYADPPAEIADAVARDTDYLRERLRELASQLPCGDPDGLAEAILVVLTGE LAMRLRDARRRRSTVGRQIGRTLITTALAG
Sequences:
>Translated_190_residues MPVRKSSEDRLLDAVDDLVFSRGIESTPVDAVLARAGVSAATLYRGFRSKEALIAAALERRHERWRVVWERAIAAATDDE ERLLAVFDAVDAFARRPDGARWCAFLGTAAEYADPPAEIADAVARDTDYLRERLRELASQLPCGDPDGLAEAILVVLTGE LAMRLRDARRRRSTVGRQIGRTLITTALAG >Mature_189_residues PVRKSSEDRLLDAVDDLVFSRGIESTPVDAVLARAGVSAATLYRGFRSKEALIAAALERRHERWRVVWERAIAAATDDEE RLLAVFDAVDAFARRPDGARWCAFLGTAAEYADPPAEIADAVARDTDYLRERLRELASQLPCGDPDGLAEAILVVLTGEL AMRLRDARRRRSTVGRQIGRTLITTALAG
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20890; Mature: 20759
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRKSSEDRLLDAVDDLVFSRGIESTPVDAVLARAGVSAATLYRGFRSKEALIAAALER CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH RHERWRVVWERAIAAATDDEERLLAVFDAVDAFARRPDGARWCAFLGTAAEYADPPAEIA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH DAVARDTDYLRERLRELASQLPCGDPDGLAEAILVVLTGELAMRLRDARRRRSTVGRQIG HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTLITTALAG HHHHHHHHCC >Mature Secondary Structure PVRKSSEDRLLDAVDDLVFSRGIESTPVDAVLARAGVSAATLYRGFRSKEALIAAALER CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH RHERWRVVWERAIAAATDDEERLLAVFDAVDAFARRPDGARWCAFLGTAAEYADPPAEIA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH DAVARDTDYLRERLRELASQLPCGDPDGLAEAILVVLTGELAMRLRDARRRRSTVGRQIG HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTLITTALAG HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA