Click here to switch to the map view.

The map label for this gene is yngJ [H]

Identifier: 119868381

GI number: 119868381

Start: 2457720

End: 2458877

Strand: Reverse

Name: yngJ [H]

Synonym: Mkms_2345

Alternate gene names: 119868381

Gene position: 2458877-2457720 (Counterclockwise)

Preceding gene: 119868382

Following gene: 119868380

Centisome position: 42.86

GC content: 69.6

Gene sequence:

>1158_bases
GTGACGACAGACGTCACCTCGCCGGAAAGCCTGCTCTTCGCCTCGACGGCACAGTCCTTCCTCGAGAAAGAGGCGTCGCT
GGCGCGGGTGCGCGAATTGCACGCCGCGGGCACCTCTTTCGACCCGCAGTGGTGGCAGCGCGCCGCCGAACTGGGCTGGG
CCAGCCTGCTGGTCCCCGAGGAACTCGGCGGCGGCAGTGTCTCGGGCAACGGGGTGGCCGATCTGGCGCTCGTCGCCGAG
CAGATCGGCCGAACCGTGGCGCCGGGACCCCTGCACCCCGTCTCGACCGTGTTGGCGGGCCTCGTCGACGCCGAGGAACC
CGAACGTCACAGCGCGCTCATCGAGTCGCTGGTCAGTGGTGAGTCCGTGGCGTCGTGGGCGGTCTACCGGCCGGGCCGCG
GCTGGGCGCCGCACGACCCCGGGGTGACGGCATCGGCCACCGGATCGGGGTTCCGCCTCGACGGCGTCGCCGACCGCGTG
GAGGCCGGCGGGGAGAGCGCCGTGCTGCTGGTGGTCACCGCATGCGACGGTGCGCTGCGTCAGTTCCTGGTGCCGACCGA
TGCGCCCGGCGTCACCGTCGAACCCCAGCGTTCGATCGATCTGGTCAAACGCTATGCACGCGTTGAGTTCTCCAGCGTCG
AGGTAGATGCTTCCGCGGCGGTCGGCGCGGCGGAACAGACCAGGGATCTCATCGCCAGGCAGAGCCAGATCGCACAGCTG
CTGCAGTGCGCCGAGGTGGTGGGCGTTCTCGGCGCGGTCGTCGACATGACCGTCCAATGGGCGTTCGACCGGCATTCGTT
CGGCCGCCCGCTGGCCTCCTACCAGGCACTCAAGCACCGGTTCGCCGACCTGAGGATCGGCCTCGAGGCGTGCCGGGCGA
CCACCCGCGCCGCCGTCGTATCGGTGGCCACCAGGGCGGCCGACGCCGATTTCAACGTCAGTGCGGCCAAATCCTATGTG
GGCGAACATGCTTCACCGATGATCCAGGACTGCGTGCAGCTCCACGGCGGGATCGGGGTCACCTGGGAACACGATCTGCA
CCTGTACCTGCGGCGGGCGACGCTGTACCGGTCCCTGTACGGCACACCCGAGGACCACAATCTGCGCGTCTATGCCCTCG
CCGAAGAGGCCGCCACCGACGAGTTGGAGCCCGCCTGA

Upstream 100 bases:

>100_bases
AGGCGTCGATCCGAAAGATCATGGGCGGCAACCTCGTCGACCTGTTCAAGGTGCCCAACGAGGTCGTCCACCGGCCCGAC
GTGCCCGCCCTGGTCATCGC

Downstream 100 bases:

>100_bases
TGACCGAGACGTCCACTCGATCCCAGTCCGCCCCGGCCGAAGCCGCCGAGTCGGTCGAGGAGTTCCAGGCCAGGGCCAGA
GCGTGGCTCGCCGACAACAT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MTTDVTSPESLLFASTAQSFLEKEASLARVRELHAAGTSFDPQWWQRAAELGWASLLVPEELGGGSVSGNGVADLALVAE
QIGRTVAPGPLHPVSTVLAGLVDAEEPERHSALIESLVSGESVASWAVYRPGRGWAPHDPGVTASATGSGFRLDGVADRV
EAGGESAVLLVVTACDGALRQFLVPTDAPGVTVEPQRSIDLVKRYARVEFSSVEVDASAAVGAAEQTRDLIARQSQIAQL
LQCAEVVGVLGAVVDMTVQWAFDRHSFGRPLASYQALKHRFADLRIGLEACRATTRAAVVSVATRAADADFNVSAAKSYV
GEHASPMIQDCVQLHGGIGVTWEHDLHLYLRRATLYRSLYGTPEDHNLRVYALAEEAATDELEPA

Sequences:

>Translated_385_residues
MTTDVTSPESLLFASTAQSFLEKEASLARVRELHAAGTSFDPQWWQRAAELGWASLLVPEELGGGSVSGNGVADLALVAE
QIGRTVAPGPLHPVSTVLAGLVDAEEPERHSALIESLVSGESVASWAVYRPGRGWAPHDPGVTASATGSGFRLDGVADRV
EAGGESAVLLVVTACDGALRQFLVPTDAPGVTVEPQRSIDLVKRYARVEFSSVEVDASAAVGAAEQTRDLIARQSQIAQL
LQCAEVVGVLGAVVDMTVQWAFDRHSFGRPLASYQALKHRFADLRIGLEACRATTRAAVVSVATRAADADFNVSAAKSYV
GEHASPMIQDCVQLHGGIGVTWEHDLHLYLRRATLYRSLYGTPEDHNLRVYALAEEAATDELEPA
>Mature_384_residues
TTDVTSPESLLFASTAQSFLEKEASLARVRELHAAGTSFDPQWWQRAAELGWASLLVPEELGGGSVSGNGVADLALVAEQ
IGRTVAPGPLHPVSTVLAGLVDAEEPERHSALIESLVSGESVASWAVYRPGRGWAPHDPGVTASATGSGFRLDGVADRVE
AGGESAVLLVVTACDGALRQFLVPTDAPGVTVEPQRSIDLVKRYARVEFSSVEVDASAAVGAAEQTRDLIARQSQIAQLL
QCAEVVGVLGAVVDMTVQWAFDRHSFGRPLASYQALKHRFADLRIGLEACRATTRAAVVSVATRAADADFNVSAAKSYVG
EHASPMIQDCVQLHGGIGVTWEHDLHLYLRRATLYRSLYGTPEDHNLRVYALAEEAATDELEPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=387, Percent_Identity=25.3229974160207, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI4501857, Length=353, Percent_Identity=22.6628895184136, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI4557231, Length=349, Percent_Identity=22.6361031518625, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI187960098, Length=349, Percent_Identity=22.6361031518625, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI7656849, Length=328, Percent_Identity=23.4756097560976, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI226958412, Length=341, Percent_Identity=23.4604105571848, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI226958414, Length=347, Percent_Identity=23.342939481268, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI4501859, Length=357, Percent_Identity=21.5686274509804, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI76496475, Length=345, Percent_Identity=22.8985507246377, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI4557235, Length=345, Percent_Identity=22.8985507246377, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17534899, Length=342, Percent_Identity=23.9766081871345, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17569725, Length=333, Percent_Identity=23.4234234234234, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17506239, Length=390, Percent_Identity=24.1025641025641, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17538396, Length=331, Percent_Identity=22.3564954682779, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17570075, Length=339, Percent_Identity=21.8289085545723, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17508101, Length=340, Percent_Identity=22.3529411764706, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24646207, Length=329, Percent_Identity=24.9240121580547, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI21355753, Length=366, Percent_Identity=23.4972677595628, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI21356377, Length=378, Percent_Identity=22.4867724867725, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24660351, Length=360, Percent_Identity=23.0555555555556, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40944; Mature: 40813

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDVTSPESLLFASTAQSFLEKEASLARVRELHAAGTSFDPQWWQRAAELGWASLLVPE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHEECHH
ELGGGSVSGNGVADLALVAEQIGRTVAPGPLHPVSTVLAGLVDAEEPERHSALIESLVSG
HCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC
ESVASWAVYRPGRGWAPHDPGVTASATGSGFRLDGVADRVEAGGESAVLLVVTACDGALR
CCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCCCEEEEEEECCCHHHH
QFLVPTDAPGVTVEPQRSIDLVKRYARVEFSSVEVDASAAVGAAEQTRDLIARQSQIAQL
HHCCCCCCCCCEECCHHHHHHHHHHHHCCHHHEEECHHHHHCCHHHHHHHHHHHHHHHHH
LQCAEVVGVLGAVVDMTVQWAFDRHSFGRPLASYQALKHRFADLRIGLEACRATTRAAVV
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVATRAADADFNVSAAKSYVGEHASPMIQDCVQLHGGIGVTWEHDLHLYLRRATLYRSLY
HHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHC
GTPEDHNLRVYALAEEAATDELEPA
CCCCCCCEEEEEEECHHCCCCCCCC
>Mature Secondary Structure 
TTDVTSPESLLFASTAQSFLEKEASLARVRELHAAGTSFDPQWWQRAAELGWASLLVPE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHEECHH
ELGGGSVSGNGVADLALVAEQIGRTVAPGPLHPVSTVLAGLVDAEEPERHSALIESLVSG
HCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC
ESVASWAVYRPGRGWAPHDPGVTASATGSGFRLDGVADRVEAGGESAVLLVVTACDGALR
CCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCCCEEEEEEECCCHHHH
QFLVPTDAPGVTVEPQRSIDLVKRYARVEFSSVEVDASAAVGAAEQTRDLIARQSQIAQL
HHCCCCCCCCCEECCHHHHHHHHHHHHCCHHHEEECHHHHHCCHHHHHHHHHHHHHHHHH
LQCAEVVGVLGAVVDMTVQWAFDRHSFGRPLASYQALKHRFADLRIGLEACRATTRAAVV
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVATRAADADFNVSAAKSYVGEHASPMIQDCVQLHGGIGVTWEHDLHLYLRRATLYRSLY
HHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHC
GTPEDHNLRVYALAEEAATDELEPA
CCCCCCCEEEEEEECHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]