| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867897
Identifier: 119867897
GI number: 119867897
Start: 1972569
End: 1973741
Strand: Reverse
Name: 119867897
Synonym: Mkms_1858
Alternate gene names: NA
Gene position: 1973741-1972569 (Counterclockwise)
Preceding gene: 119867898
Following gene: 119867894
Centisome position: 34.4
GC content: 71.78
Gene sequence:
>1173_bases ATGCTCCAGACTGTGGCGATCCGCGGTTACCGCTCACTGCGCGATGTGGTGCTCCCGCTGCGCCGGCTGAGCGTGGTCAC GGGAGCCAACGGCAGCGGCAAGTCCTCGTTGTACCGCGCGCTGGGCCTGCTGGCCGACTGCGGCCGCGGTGAGGTGATCG GGTCGCTGGCCCGGGAGGGCGGGCTGGAGTCGGTGCTGTGGGCCGGCCCGGAACAGGTCGCCGGCGCCCGGCGCACGGGC ACCACGGAAGGCACCGTCCGCACCCGGCCCGTCTCTCTCGAACTCGGTTACGCCGCAGACGATGTCGGCTATCTCGTGGA TCTCGGCCTGCCCCAGCACGCCGGTCCGGGCTCGCTGTTCGCACGCGACCCGCAGATCAAGCGCGAAGCGGTGTTCGCCG GGCCGGTGCTGCGCCCCGCCGCCACCCTGGTGCGTCGCGGCGGTCAGTACGCCGAGGCCAGCGCCGAATCGGGCCGCGGC TTCGACGAACTGACCCGGTCGCTGCCGTCCTACCGCAGCGTGCTCGCCGAATACACCGGCGCGGTACCCGAACTCACGTC CGTGCACGACCGGTTGCGCAACTGGCGGTTCTACGACGGATTCCGGGTGGACGCGACGGCCCCCGCGCGCCACCCGCAGG TGGGCACACGCACGCCGGTGCTCTCCGCCGACGGCAGCGACCTGGCGGCCGCCGTGCAGACGATCATCGAGGCGGGGTTC GACGATCTGCCCCGCGCGGTCTCCGACGCATTCGACGGTGCGACGCTCGACGTCGCCGTCCACGACGGGCTCTTCGATCT GCGGTTACGCCAGCGCGGGATGTTGCGCCCCCTGCGGTGCGCCGAATTATCCGACGGGACATTGCGTTTCCTGCTGTGGA CGGCCGCGCTGCTCAGTCCGGAACCGCCGTCGCTGATGGTGCTCAACGAACCGGAGACCTCGCTGCATCCGGACCTCGTA CGCCCGTTGGCCGGGCTTGTCACCGCGGCCGCGGCGCGCACGCAGGTCGTCGTCGTCACCCACTCCCCCGCGATGATCGA CCTGCTGGGCGCGGTGCCGCTCGACGAGGACGGCGATGCGGTCCGGCTCGCGCTGTACAAGGAGTTCGGCGAGACCCGCG TCGCCGGCCAGGGTCTGCTGAGCACGCCGCCGTGGGACTGGGGTAAGCGCTGA
Upstream 100 bases:
>100_bases CCGGCCGATCCGGCTCCTCGGGGTGCGTTTGGAGTTGGCGATGCCGGAAGCCCCCAAGCCCCCGGAACCCCTTGTCGCCG CGGACCAATAGCCTCGCCTC
Downstream 100 bases:
>100_bases GCGAGCCCTACCGGCGGGCGGGTCGCAGGGCGCGGGAGAACAAGACGTTGACCTGGCGCATCGCGACGCTGTAGGGCCAC CACATGGTGCGCTTGAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: SMC Domain-Containing Protein; ATPase-Like Protein; RecF Protein; ATPase RecF-Like Protein; SMC Domain Protein; RecF/RecN/SMC N Terminal Domain; RecF/RecN/SMC Domain-Containing Protein; Recf Like Family Protein; ATPase RecF-Like; DNA Replication And Repair Protein RecF
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MLQTVAIRGYRSLRDVVLPLRRLSVVTGANGSGKSSLYRALGLLADCGRGEVIGSLAREGGLESVLWAGPEQVAGARRTG TTEGTVRTRPVSLELGYAADDVGYLVDLGLPQHAGPGSLFARDPQIKREAVFAGPVLRPAATLVRRGGQYAEASAESGRG FDELTRSLPSYRSVLAEYTGAVPELTSVHDRLRNWRFYDGFRVDATAPARHPQVGTRTPVLSADGSDLAAAVQTIIEAGF DDLPRAVSDAFDGATLDVAVHDGLFDLRLRQRGMLRPLRCAELSDGTLRFLLWTAALLSPEPPSLMVLNEPETSLHPDLV RPLAGLVTAAAARTQVVVVTHSPAMIDLLGAVPLDEDGDAVRLALYKEFGETRVAGQGLLSTPPWDWGKR
Sequences:
>Translated_390_residues MLQTVAIRGYRSLRDVVLPLRRLSVVTGANGSGKSSLYRALGLLADCGRGEVIGSLAREGGLESVLWAGPEQVAGARRTG TTEGTVRTRPVSLELGYAADDVGYLVDLGLPQHAGPGSLFARDPQIKREAVFAGPVLRPAATLVRRGGQYAEASAESGRG FDELTRSLPSYRSVLAEYTGAVPELTSVHDRLRNWRFYDGFRVDATAPARHPQVGTRTPVLSADGSDLAAAVQTIIEAGF DDLPRAVSDAFDGATLDVAVHDGLFDLRLRQRGMLRPLRCAELSDGTLRFLLWTAALLSPEPPSLMVLNEPETSLHPDLV RPLAGLVTAAAARTQVVVVTHSPAMIDLLGAVPLDEDGDAVRLALYKEFGETRVAGQGLLSTPPWDWGKR >Mature_390_residues MLQTVAIRGYRSLRDVVLPLRRLSVVTGANGSGKSSLYRALGLLADCGRGEVIGSLAREGGLESVLWAGPEQVAGARRTG TTEGTVRTRPVSLELGYAADDVGYLVDLGLPQHAGPGSLFARDPQIKREAVFAGPVLRPAATLVRRGGQYAEASAESGRG FDELTRSLPSYRSVLAEYTGAVPELTSVHDRLRNWRFYDGFRVDATAPARHPQVGTRTPVLSADGSDLAAAVQTIIEAGF DDLPRAVSDAFDGATLDVAVHDGLFDLRLRQRGMLRPLRCAELSDGTLRFLLWTAALLSPEPPSLMVLNEPETSLHPDLV RPLAGLVTAAAARTQVVVVTHSPAMIDLLGAVPLDEDGDAVRLALYKEFGETRVAGQGLLSTPPWDWGKR
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41732; Mature: 41732
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQTVAIRGYRSLRDVVLPLRRLSVVTGANGSGKSSLYRALGLLADCGRGEVIGSLAREG CCCEEEEHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCC GLESVLWAGPEQVAGARRTGTTEGTVRTRPVSLELGYAADDVGYLVDLGLPQHAGPGSLF CCCHHHHCCHHHHCCCCCCCCCCCCEEECEEEEEECCCCCCCCEEEECCCCCCCCCCCCC ARDPQIKREAVFAGPVLRPAATLVRRGGQYAEASAESGRGFDELTRSLPSYRSVLAEYTG CCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC AVPELTSVHDRLRNWRFYDGFRVDATAPARHPQVGTRTPVLSADGSDLAAAVQTIIEAGF CCCHHHHHHHHHHCCEEECCEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCH DDLPRAVSDAFDGATLDVAVHDGLFDLRLRQRGMLRPLRCAELSDGTLRFLLWTAALLSP HHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHCC EPPSLMVLNEPETSLHPDLVRPLAGLVTAAAARTQVVVVTHSPAMIDLLGAVPLDEDGDA CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHCCCCCCCCCE VRLALYKEFGETRVAGQGLLSTPPWDWGKR EEEHHHHHHCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MLQTVAIRGYRSLRDVVLPLRRLSVVTGANGSGKSSLYRALGLLADCGRGEVIGSLAREG CCCEEEEHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCC GLESVLWAGPEQVAGARRTGTTEGTVRTRPVSLELGYAADDVGYLVDLGLPQHAGPGSLF CCCHHHHCCHHHHCCCCCCCCCCCCEEECEEEEEECCCCCCCCEEEECCCCCCCCCCCCC ARDPQIKREAVFAGPVLRPAATLVRRGGQYAEASAESGRGFDELTRSLPSYRSVLAEYTG CCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC AVPELTSVHDRLRNWRFYDGFRVDATAPARHPQVGTRTPVLSADGSDLAAAVQTIIEAGF CCCHHHHHHHHHHCCEEECCEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCH DDLPRAVSDAFDGATLDVAVHDGLFDLRLRQRGMLRPLRCAELSDGTLRFLLWTAALLSP HHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHCC EPPSLMVLNEPETSLHPDLVRPLAGLVTAAAARTQVVVVTHSPAMIDLLGAVPLDEDGDA CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHCCCCCCCCCE VRLALYKEFGETRVAGQGLLSTPPWDWGKR EEEHHHHHHCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA